RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 RSPH10BP0C881 870 aa21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 HPDP32754 393 aaPredicted RBP21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 CIITAP33076 1130 aa21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 C3orf20Q8ND61 904 aa21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 U2AF1L4Q8WU68 220 aaKnown RBP21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 TEKT1Q969V4 418 aa21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 BORCS6Q96GS4 357 aa21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 C8orf37Q96NL8 207 aa21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 NCAPGQ9BPX3 1015 aa21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 AMACRQ9UHK6 382 aa21.9■■□□□ 1.1
SYNGAP1-227ENST00000638142 EIF3DO15371 548 aaKnown RBP eCLIP21.89■■□□□ 1.1
SYNGAP1-227ENST00000638142 NFIL3Q16649 462 aa21.89■■□□□ 1.1
SYNGAP1-227ENST00000638142 PTPROQ16827 1216 aa21.89■■□□□ 1.1
SYNGAP1-227ENST00000638142 FAM182BQ5T319 152 aa21.89■■□□□ 1.1
SYNGAP1-227ENST00000638142 AGBL2Q5U5Z8 902 aa21.89■■□□□ 1.1
SYNGAP1-227ENST00000638142 APOBEC3HQ6NTF7 200 aaKnown RBP21.89■■□□□ 1.1
SYNGAP1-227ENST00000638142 SLC30A5Q8TAD4 765 aa21.89■■□□□ 1.1
SYNGAP1-227ENST00000638142 RUSC1Q9BVN2 902 aa21.89■■□□□ 1.1
SYNGAP1-227ENST00000638142 CENPHQ9H3R5 247 aa21.89■■□□□ 1.1
SYNGAP1-227ENST00000638142 DNAJC18Q9H819 358 aa21.89■■□□□ 1.1
SYNGAP1-227ENST00000638142 FAM114A2Q9NRY5 505 aa21.89■■□□□ 1.1
SYNGAP1-227ENST00000638142 AMFRQ9UKV5 643 aa21.89■■□□□ 1.1
SYNGAP1-227ENST00000638142 VAV3Q9UKW4 847 aa21.89■■□□□ 1.1
SYNGAP1-227ENST00000638142 RABGAP1Q9Y3P9 1069 aa21.89■■□□□ 1.1
SYNGAP1-227ENST00000638142 NCANO14594 1321 aa21.89■■□□□ 1.09
SYNGAP1-227ENST00000638142 PPEF1O14829 653 aaPredicted RBP21.89■■□□□ 1.09
SYNGAP1-227ENST00000638142 PPP1R12BO60237 982 aaPredicted RBP21.89■■□□□ 1.09
SYNGAP1-227ENST00000638142 LMNB1P20700 586 aa21.89■■□□□ 1.09
SYNGAP1-227ENST00000638142 SCNN1DP51172 638 aa21.89■■□□□ 1.09
SYNGAP1-227ENST00000638142 SEC24CP53992 1094 aa21.89■■□□□ 1.09
SYNGAP1-227ENST00000638142 SLC12A6Q9UHW9 1150 aa21.89■■□□□ 1.09
SYNGAP1-227ENST00000638142 PCDHB13Q9Y5F0 798 aa21.89■■□□□ 1.09
SYNGAP1-227ENST00000638142 KLRG2A4D1S0 409 aaPredicted RBP21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 E7EVH7 732 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 ITGA4P13612 1032 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 MMP14P50281 582 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 GALCP54803 685 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 NFIAQ12857 509 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 GJB7Q6PEY0 223 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 DIS3Q9Y2L1 958 aaKnown RBP21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 CAPN7Q9Y6W3 813 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 MYO1FO00160 1098 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 CLIC2O15247 247 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 MSH4O15457 936 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 DAPK3O43293 454 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 TGFB1I1O43294 461 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 EVI5O60447 810 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 SOX5P35711 763 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 PSMC2P35998 433 aaKnown RBP21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 CYP4A11Q02928 519 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 SLC15A2Q16348 729 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 TMC3Q7Z5M5 1100 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 FBXO11Q86XK2 927 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 OR2W6PQ8NHA6 318 aa21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 UBLCP1Q8WVY7 318 aaPredicted RBP21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 ZC3H12CQ9C0D7 883 aaKnown RBP21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 UTP11Q9Y3A2 253 aaKnown RBP21.88■■□□□ 1.09
SYNGAP1-227ENST00000638142 HDLBPQ00341 1268 aaKnown RBP21.87■■□□□ 1.09
SYNGAP1-227ENST00000638142 FMNL3Q8IVF7 1028 aa21.87■■□□□ 1.09
SYNGAP1-227ENST00000638142 FAM186BQ8IYM0 893 aa21.87■■□□□ 1.09
SYNGAP1-227ENST00000638142 LNX1Q8TBB1 728 aaPredicted RBP21.87■■□□□ 1.09
SYNGAP1-227ENST00000638142 RFFLQ8WZ73 363 aa21.87■■□□□ 1.09
SYNGAP1-227ENST00000638142 EIF2AK1Q9BQI3 630 aaKnown RBP21.87■■□□□ 1.09
SYNGAP1-227ENST00000638142 MKNK1Q9BUB5 465 aa21.87■■□□□ 1.09
SYNGAP1-227ENST00000638142 STK33Q9BYT3 514 aa21.87■■□□□ 1.09
SYNGAP1-227ENST00000638142 THSD7AQ9UPZ6 1657 aa21.87■■□□□ 1.09
SYNGAP1-227ENST00000638142 F8VZ95 297 aa21.87■■□□□ 1.09
SYNGAP1-227ENST00000638142 TMEM253P0C7T8 217 aa21.87■■□□□ 1.09
SYNGAP1-227ENST00000638142 HSPA1LP34931 641 aa21.87■■□□□ 1.09
SYNGAP1-227ENST00000638142 CERKLQ49MI3 558 aaPredicted RBP21.87■■□□□ 1.09
SYNGAP1-227ENST00000638142 CCDC91Q7Z6B0 441 aa21.87■■□□□ 1.09
SYNGAP1-227ENST00000638142 OLIG1Q8TAK6 271 aa21.87■■□□□ 1.09
SYNGAP1-227ENST00000638142 TTI1O43156 1089 aa21.86■■□□□ 1.09
SYNGAP1-227ENST00000638142 KCNA1Q09470 495 aa21.86■■□□□ 1.09
SYNGAP1-227ENST00000638142 PPP2R5EQ16537 467 aa21.86■■□□□ 1.09
SYNGAP1-227ENST00000638142 ZMYM2Q9UBW7 1377 aa21.86■■□□□ 1.09
SYNGAP1-227ENST00000638142 SLURP2P0DP57 97 aa21.86■■□□□ 1.09
SYNGAP1-227ENST00000638142 POU5F1Q01860 360 aaKnown RBP21.86■■□□□ 1.09
SYNGAP1-227ENST00000638142 SPDYCQ5MJ68 293 aa21.86■■□□□ 1.09
SYNGAP1-227ENST00000638142 RINT1Q6NUQ1 792 aa21.86■■□□□ 1.09
SYNGAP1-227ENST00000638142 ADAMTSL1Q8N6G6 1762 aa21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 GMNCA6NCL1 334 aa21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 BUB1BO60566 1050 aaPredicted RBP21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 CYP3A4P08684 503 aa21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 FLT3P36888 993 aa21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 MNAT1P51948 309 aa21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 PPP2R2AP63151 447 aa21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 ZFPM1Q8IX07 1006 aa21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 CYFIP2Q96F07 1278 aa21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 CABS1Q96KC9 395 aa21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 MYCBPQ99417 103 aaPredicted RBP21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 RAB17Q9H0T7 212 aa21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 PPANQ9NQ55 473 aaKnown RBP21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 LRRC4BQ9NT99 713 aa21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 H0YHG0 523 aa21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 FAM13AO94988 1023 aa21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 FGGP02679 453 aa21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 CCDC172P0C7W6 258 aa21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 GLYCTKQ8IVS8 523 aa21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 PROCA1Q8NCQ7 364 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms