RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 STK36Q9NRP7 1315 aa20.2■□□□□ 0.82
PNKP-225ENST00000636214 MARCH6O60337 910 aa20.19■□□□□ 0.82
PNKP-225ENST00000636214 PFKFB2O60825 505 aa20.19■□□□□ 0.82
PNKP-225ENST00000636214 INF2Q27J81 1249 aa20.19■□□□□ 0.82
PNKP-225ENST00000636214 LETM2Q2VYF4 491 aa20.19■□□□□ 0.82
PNKP-225ENST00000636214 TCEAL5Q5H9L2 206 aa20.19■□□□□ 0.82
PNKP-225ENST00000636214 RTN4RL1Q86UN2 441 aaPredicted RBP20.19■□□□□ 0.82
PNKP-225ENST00000636214 PPP2R3CQ969Q6 453 aa20.19■□□□□ 0.82
PNKP-225ENST00000636214 ADAM2Q99965 735 aa20.19■□□□□ 0.82
PNKP-225ENST00000636214 BRMS1Q9HCU9 246 aa20.19■□□□□ 0.82
PNKP-225ENST00000636214 SEPT9Q9UHD8 586 aaPredicted RBP20.19■□□□□ 0.82
PNKP-225ENST00000636214 ST3GAL5Q9UNP4 418 aa20.19■□□□□ 0.82
PNKP-225ENST00000636214 KCNJ14Q9UNX9 436 aa20.19■□□□□ 0.82
PNKP-225ENST00000636214 MUC3AQ02505 3323 aa20.19■□□□□ 0.82
PNKP-225ENST00000636214 CYP3A7-CYP3A51PA0A087WV96 503 aa20.18■□□□□ 0.82
PNKP-225ENST00000636214 NCK2O43639 380 aa20.18■□□□□ 0.82
PNKP-225ENST00000636214 CSPG5O95196 566 aa20.18■□□□□ 0.82
PNKP-225ENST00000636214 CYP3A7P24462 503 aa20.18■□□□□ 0.82
PNKP-225ENST00000636214 LRRC71Q8N4P6 559 aa20.18■□□□□ 0.82
PNKP-225ENST00000636214 NAP1L4Q99733 375 aaKnown RBP20.18■□□□□ 0.82
PNKP-225ENST00000636214 TMX1Q9H3N1 280 aa20.18■□□□□ 0.82
PNKP-225ENST00000636214 CDHR5Q9HBB8 845 aa20.18■□□□□ 0.82
PNKP-225ENST00000636214 TPCN1Q9ULQ1 816 aa20.18■□□□□ 0.82
PNKP-225ENST00000636214 MRPL42Q9Y6G3 142 aaKnown RBP20.18■□□□□ 0.82
PNKP-225ENST00000636214 M0R2N6 131 aa20.17■□□□□ 0.82
PNKP-225ENST00000636214 PSMD10O75832 226 aa20.17■□□□□ 0.82
PNKP-225ENST00000636214 CENPBP07199 599 aaPredicted RBP20.17■□□□□ 0.82
PNKP-225ENST00000636214 GCFC2P16383 781 aaKnown RBP20.17■□□□□ 0.82
PNKP-225ENST00000636214 ZSCAN20P17040 1043 aaPredicted RBP20.17■□□□□ 0.82
PNKP-225ENST00000636214 NLRP11P59045 1033 aaKnown RBP20.17■□□□□ 0.82
PNKP-225ENST00000636214 PUS10Q3MIT2 529 aaKnown RBP20.17■□□□□ 0.82
PNKP-225ENST00000636214 LEXMQ3ZCV2 418 aa20.17■□□□□ 0.82
PNKP-225ENST00000636214 NAALADL2Q58DX5 795 aa20.17■□□□□ 0.82
PNKP-225ENST00000636214 XKR3Q5GH77 459 aa20.17■□□□□ 0.82
PNKP-225ENST00000636214 SLC24A5Q71RS6 500 aa20.17■□□□□ 0.82
PNKP-225ENST00000636214 NEK8Q86SG6 692 aa20.17■□□□□ 0.82
PNKP-225ENST00000636214 TMEM40Q8WWA1 233 aa20.17■□□□□ 0.82
PNKP-225ENST00000636214 GJA10Q969M2 543 aa20.17■□□□□ 0.82
PNKP-225ENST00000636214 PHF20Q9BVI0 1012 aa20.17■□□□□ 0.82
PNKP-225ENST00000636214 AAASQ9NRG9 546 aa20.17■□□□□ 0.82
PNKP-225ENST00000636214 ORC3Q9UBD5 711 aaPredicted RBP20.17■□□□□ 0.82
PNKP-225ENST00000636214 FAM50BQ9Y247 325 aa20.17■□□□□ 0.82
PNKP-225ENST00000636214 TBKBP1A7MCY6 615 aa20.16■□□□□ 0.82
PNKP-225ENST00000636214 ZNF862O60290 1169 aa20.16■□□□□ 0.82
PNKP-225ENST00000636214 GPR32O75388 356 aa20.16■□□□□ 0.82
PNKP-225ENST00000636214 DNM2P50570 870 aa20.16■□□□□ 0.82
PNKP-225ENST00000636214 AK2P54819 239 aa20.16■□□□□ 0.82
PNKP-225ENST00000636214 UGCGQ16739 394 aa20.16■□□□□ 0.82
PNKP-225ENST00000636214 MTERF2Q49AM1 385 aa20.16■□□□□ 0.82
PNKP-225ENST00000636214 FAM228AQ86W67 206 aa20.16■□□□□ 0.82
PNKP-225ENST00000636214 NLRP7Q8WX94 980 aa20.16■□□□□ 0.82
PNKP-225ENST00000636214 P2RX5Q93086 422 aa20.16■□□□□ 0.82
PNKP-225ENST00000636214 PABPC5Q96DU9 382 aaKnown RBP20.16■□□□□ 0.82
PNKP-225ENST00000636214 ATP6V0A4Q9HBG4 840 aa20.16■□□□□ 0.82
PNKP-225ENST00000636214 RGS18Q9NS28 235 aa20.16■□□□□ 0.82
PNKP-225ENST00000636214 CLDND1Q9NY35 253 aa20.16■□□□□ 0.82
PNKP-225ENST00000636214 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.15■□□□□ 0.82
PNKP-225ENST00000636214 GRM6O15303 877 aa20.15■□□□□ 0.82
PNKP-225ENST00000636214 HOXA2O43364 376 aa20.15■□□□□ 0.82
PNKP-225ENST00000636214 EDIL3O43854 480 aa20.15■□□□□ 0.82
PNKP-225ENST00000636214 MGEA5O60502 916 aa20.15■□□□□ 0.82
PNKP-225ENST00000636214 DKC1O60832 514 aaKnown RBP eCLIP20.15■□□□□ 0.82
PNKP-225ENST00000636214 MMP1P03956 469 aa20.15■□□□□ 0.82
PNKP-225ENST00000636214 CDC42EP1Q00587 391 aa20.15■□□□□ 0.82
PNKP-225ENST00000636214 PIK3AP1Q6ZUJ8 805 aa20.15■□□□□ 0.82
PNKP-225ENST00000636214 ETNPPLQ8TBG4 499 aa20.15■□□□□ 0.82
PNKP-225ENST00000636214 JPH2Q9BR39 696 aaPredicted RBP20.15■□□□□ 0.82
PNKP-225ENST00000636214 ALG13Q9NP73 1137 aaKnown RBP20.15■□□□□ 0.82
PNKP-225ENST00000636214 PCDHB12Q9Y5F1 795 aa20.15■□□□□ 0.82
PNKP-225ENST00000636214 DDX11L8A8MPP1 907 aa20.14■□□□□ 0.81
PNKP-225ENST00000636214 CCNT1O60563 726 aaKnown RBP20.14■□□□□ 0.81
PNKP-225ENST00000636214 LINC00271P0C7V0 271 aa20.14■□□□□ 0.81
PNKP-225ENST00000636214 EIF4BP23588 611 aaKnown RBP20.14■□□□□ 0.81
PNKP-225ENST00000636214 PSMC5P62195 406 aa20.14■□□□□ 0.81
PNKP-225ENST00000636214 NPY5RQ15761 445 aa20.14■□□□□ 0.81
PNKP-225ENST00000636214 PTCRAQ6ISU1 281 aaPredicted RBP20.14■□□□□ 0.81
PNKP-225ENST00000636214 FAM20AQ96MK3 541 aa20.14■□□□□ 0.81
PNKP-225ENST00000636214 MBOAT7Q96N66 472 aa20.14■□□□□ 0.81
PNKP-225ENST00000636214 TMEM161AQ9NX61 479 aa20.14■□□□□ 0.81
PNKP-225ENST00000636214 C9IYK1 514 aa20.13■□□□□ 0.81
PNKP-225ENST00000636214 H3BQ06 376 aaPredicted RBP20.13■□□□□ 0.81
PNKP-225ENST00000636214 SLC37A4O43826 429 aa20.13■□□□□ 0.81
PNKP-225ENST00000636214 KRT2P35908 639 aa20.13■□□□□ 0.81
PNKP-225ENST00000636214 GATMP50440 423 aa20.13■□□□□ 0.81
PNKP-225ENST00000636214 TRIM29Q14134 588 aa20.13■□□□□ 0.81
PNKP-225ENST00000636214 ABI1Q8IZP0 508 aa20.13■□□□□ 0.81
PNKP-225ENST00000636214 CRIPAKQ8N1N5 446 aa20.13■□□□□ 0.81
PNKP-225ENST00000636214 GCOM2Q9BZD3 368 aaPredicted RBP20.13■□□□□ 0.81
PNKP-225ENST00000636214 ADAMTS10Q9H324 1103 aa20.13■□□□□ 0.81
PNKP-225ENST00000636214 PLAGL2Q9UPG8 496 aa20.13■□□□□ 0.81
PNKP-225ENST00000636214 KIAA1671Q9BY89 1806 aa20.13■□□□□ 0.81
PNKP-225ENST00000636214 BAG4O95429 457 aaKnown RBP20.12■□□□□ 0.81
PNKP-225ENST00000636214 SSTR3P32745 418 aaPredicted RBP20.12■□□□□ 0.81
PNKP-225ENST00000636214 GPC3P51654 580 aa20.12■□□□□ 0.81
PNKP-225ENST00000636214 NEK4P51957 841 aa20.12■□□□□ 0.81
PNKP-225ENST00000636214 CSPP1Q1MSJ5 1256 aa20.12■□□□□ 0.81
PNKP-225ENST00000636214 PPP4R3AQ6IN85 833 aa20.12■□□□□ 0.81
PNKP-225ENST00000636214 LINC01465Q8N7H1 131 aa20.12■□□□□ 0.81
PNKP-225ENST00000636214 KLHL23Q8NBE8 558 aa20.12■□□□□ 0.81
PNKP-225ENST00000636214 ZNF668Q96K58 619 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms