RNA–Protein interactions for RNA: ENST00000636102.1

ARHGEF9-223, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 2,112 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-223	ENST00000636102	ARHGAP4	P98171	946 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	SNRNP48	Q6IEG0	339 aa	Known RBP	11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	PPP4R3A	Q6IN85	833 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	GPAT2	Q6NUI2	795 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	KDM7A	Q6ZMT4	941 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	CCDC13	Q8IYE1	715 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	MAB21L3	Q8N8X9	362 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	C3orf20	Q8ND61	904 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	UIMC1	Q96RL1	719 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	ERGIC2	Q96RQ1	377 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	TSGA10	Q9BZW7	698 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	SLC40A1	Q9NP59	571 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	BATF3	Q9NR55	127 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	UNCX	A6NJT0	531 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	UBXN2A	P68543	259 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	ASIC1	P78348	528 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	TBC1D8B	Q0IIM8	1120 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	SNAPC2	Q13487	334 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	PLS1	Q14651	629 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	NAA35	Q5VZE5	725 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	UNC13D	Q70J99	1090 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	C1orf131	Q8NDD1	294 aa	Known RBP	11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	GJA10	Q969M2	543 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	MTMR9	Q96QG7	549 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	COL20A1	Q9P218	1284 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	DDX25	Q9UHL0	483 aa	Known RBP	11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	AGTPBP1	Q9UPW5	1226 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	ATAD5	Q96QE3	1844 aa		11.69	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	ANO9	A1A5B4	782 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	TRIM21	P19474	475 aa	Known RBP	11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	SREBF1	P36956	1147 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	STAT3	P40763	770 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	HSD17B4	P51659	736 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	CLNS1A	P54105	237 aa	Known RBP	11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	LRRC63	Q05C16	580 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	NNT	Q13423	1086 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	BIRC2	Q13490	618 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	NAIF1	Q69YI7	327 aa	Predicted RBP	11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	CENPP	Q6IPU0	288 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	EMB	Q6PCB8	327 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	FASTKD5	Q7L8L6	764 aa	Known RBP	11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	MCF2L2	Q86YR7	1114 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	PARP9	Q8IXQ6	854 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	MMGT1	Q8N4V1	131 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	ARMC2	Q8NEN0	867 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	CDK5RAP3	Q96JB5	506 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	DUSP9	Q99956	384 aa	Known RBP	11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	EDEM3	Q9BZQ6	932 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	BTBD7	Q9P203	1132 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	DDX20	Q9UHI6	824 aa	Known RBP	11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	MAPK8IP1	Q9UQF2	711 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	MYPN	Q86TC9	1320 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	ATP2A1	O14983	1001 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	MYBL2	P10244	700 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	TNFRSF8	P28908	595 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	TXK	P42681	527 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	OAZ1	P54368	228 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	EPHB4	P54760	987 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	CALCRL	Q16602	461 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	C6orf89	Q6UWU4	347 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	LBX2	Q6XYB7	198 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	ZNF572	Q7Z3I7	529 aa	Predicted RBP	11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	GUF1	Q8N442	669 aa	Known RBP	11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	CYP2W1	Q8TAV3	490 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	ZNF473	Q8WTR7	871 aa	Known RBP	11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	CAVIN3	Q969G5	261 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	MS4A4A	Q96JQ5	239 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	CNOT6L	Q96LI5	555 aa	Known RBP	11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	PURB	Q96QR8	312 aa	Known RBP	11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	RUFY1	Q96T51	708 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	NOC4L	Q9BVI4	516 aa	Known RBP	11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	TTYH3	Q9C0H2	523 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	RNF146	Q9NTX7	359 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	LRWD1	Q9UFC0	647 aa		11.68	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	TRIM49B	A6NDI0	452 aa		11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	PP2D1	A8MPX8	630 aa		11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	FAM86B1	E9PN63	330 aa		11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	PES1	O00541	588 aa	Known RBP	11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	HSF2BP	O75031	334 aa		11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	ABL1	P00519	1130 aa		11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	FAM86B2	P0C5J1	330 aa		11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	CYP3A7	P24462	503 aa		11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	HNRNPH3	P31942	346 aa	Known RBP	11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	LSP1	P33241	339 aa		11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	TEC	P42680	631 aa		11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	MTIF2	P46199	727 aa	Known RBP	11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	PMS1	P54277	932 aa	Known RBP	11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	RPS6	P62753	249 aa	Known RBP	11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	KRT79	Q5XKE5	535 aa		11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	NSMF	Q6X4W1	530 aa		11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	HAS1	Q92839	578 aa		11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	SH3GL3	Q99963	347 aa		11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	TEX13B	Q9BXU2	312 aa		11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	PNMA2	Q9UL42	364 aa		11.67	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	CYP3A4	P08684	503 aa		11.66	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	HUNK	P57058	714 aa		11.66	□□□□□ -0.54
ARHGEF9-223	ENST00000636102	HERVK_113	P62684	666 aa		11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms