RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 DYNC1LI2O43237 492 aaPredicted RBP17.08■□□□□ 0.33
CLN8-209ENST00000635970 GYPCP04921 128 aa17.08■□□□□ 0.33
CLN8-209ENST00000635970 CASP14P31944 242 aa17.08■□□□□ 0.33
CLN8-209ENST00000635970 BEX3Q00994 111 aa17.08■□□□□ 0.33
CLN8-209ENST00000635970 MTMR1Q13613 665 aa17.08■□□□□ 0.33
CLN8-209ENST00000635970 MCM6Q14566 821 aa17.08■□□□□ 0.33
CLN8-209ENST00000635970 LRRC41Q15345 812 aa17.08■□□□□ 0.33
CLN8-209ENST00000635970 MAP9Q49MG5 647 aa17.08■□□□□ 0.33
CLN8-209ENST00000635970 CEP55Q53EZ4 464 aa17.08■□□□□ 0.33
CLN8-209ENST00000635970 SRLQ86TD4 932 aa17.08■□□□□ 0.33
CLN8-209ENST00000635970 UIMC1Q96RL1 719 aa17.08■□□□□ 0.33
CLN8-209ENST00000635970 MXRA8Q9BRK3 442 aa17.08■□□□□ 0.33
CLN8-209ENST00000635970 ABCB6Q9NP58 842 aa17.08■□□□□ 0.33
CLN8-209ENST00000635970 VPS18Q9P253 973 aa17.08■□□□□ 0.33
CLN8-209ENST00000635970 RWDD2AQ9UIY3 292 aa17.08■□□□□ 0.33
CLN8-209ENST00000635970 SPATA31C2B4DYI2 1134 aa17.08■□□□□ 0.32
CLN8-209ENST00000635970 MYO1CO00159 1063 aa17.08■□□□□ 0.32
CLN8-209ENST00000635970 CYP3A4P08684 503 aa17.08■□□□□ 0.32
CLN8-209ENST00000635970 ZNF76P36508 570 aa17.08■□□□□ 0.32
CLN8-209ENST00000635970 ZNF662Q6ZS27 426 aa17.08■□□□□ 0.32
CLN8-209ENST00000635970 NLRX1Q86UT6 975 aa17.08■□□□□ 0.32
CLN8-209ENST00000635970 SLC35F6Q8N357 371 aa17.08■□□□□ 0.32
CLN8-209ENST00000635970 GOLGA6L1Q8N7Z2 621 aa17.08■□□□□ 0.32
CLN8-209ENST00000635970 OR6J1Q8NGC5 347 aa17.08■□□□□ 0.32
CLN8-209ENST00000635970 JADE2Q9NQC1 790 aa17.08■□□□□ 0.32
CLN8-209ENST00000635970 ABHD10Q9NUJ1 306 aa17.08■□□□□ 0.32
CLN8-209ENST00000635970 IGLV3-22A0A075B6J6 115 aa17.07■□□□□ 0.32
CLN8-209ENST00000635970 ATP9AO75110 1047 aa17.07■□□□□ 0.32
CLN8-209ENST00000635970 TDP2O95551 362 aa17.07■□□□□ 0.32
CLN8-209ENST00000635970 ARP10275 920 aa17.07■□□□□ 0.32
CLN8-209ENST00000635970 ICAM3P32942 547 aa17.07■□□□□ 0.32
CLN8-209ENST00000635970 GJA9P57773 515 aa17.07■□□□□ 0.32
CLN8-209ENST00000635970 ARHGAP1Q07960 439 aa17.07■□□□□ 0.32
CLN8-209ENST00000635970 CASP8Q14790 479 aa17.07■□□□□ 0.32
CLN8-209ENST00000635970 GRAMD1CQ8IYS0 662 aa17.07■□□□□ 0.32
CLN8-209ENST00000635970 GPRASP2Q96D09 838 aa17.07■□□□□ 0.32
CLN8-209ENST00000635970 PNKPQ96T60 521 aa17.07■□□□□ 0.32
CLN8-209ENST00000635970 UPF3AQ9H1J1 476 aaKnown RBP17.07■□□□□ 0.32
CLN8-209ENST00000635970 RMND1Q9NWS8 449 aa17.07■□□□□ 0.32
CLN8-209ENST00000635970 MYO6Q9UM54 1294 aa17.07■□□□□ 0.32
CLN8-209ENST00000635970 GGPS1O95749 300 aa17.06■□□□□ 0.32
CLN8-209ENST00000635970 KCNH7Q9NS40 1196 aa17.06■□□□□ 0.32
CLN8-209ENST00000635970 TELO2Q9Y4R8 837 aa17.06■□□□□ 0.32
CLN8-209ENST00000635970 TNRC18O15417 2968 aaPredicted RBP17.06■□□□□ 0.32
CLN8-209ENST00000635970 ALPK3Q96L96 1907 aa17.06■□□□□ 0.32
CLN8-209ENST00000635970 MEIS1O00470 390 aa17.06■□□□□ 0.32
CLN8-209ENST00000635970 WNT7AO00755 349 aa17.06■□□□□ 0.32
CLN8-209ENST00000635970 NKRFO15226 690 aaKnown RBP eCLIP17.06■□□□□ 0.32
CLN8-209ENST00000635970 FARP2O94887 1054 aaPredicted RBP17.06■□□□□ 0.32
CLN8-209ENST00000635970 CD44P16070 742 aaKnown RBP17.06■□□□□ 0.32
CLN8-209ENST00000635970 KCNA2P16389 499 aa17.06■□□□□ 0.32
CLN8-209ENST00000635970 LETM2Q2VYF4 491 aa17.06■□□□□ 0.32
CLN8-209ENST00000635970 PRR16Q569H4 304 aa17.06■□□□□ 0.32
CLN8-209ENST00000635970 RNF180Q86T96 592 aa17.06■□□□□ 0.32
CLN8-209ENST00000635970 EHBP1Q8NDI1 1231 aa17.06■□□□□ 0.32
CLN8-209ENST00000635970 CPLX3Q8WVH0 158 aa17.06■□□□□ 0.32
CLN8-209ENST00000635970 LENG9Q96B70 501 aa17.06■□□□□ 0.32
CLN8-209ENST00000635970 AP5M1Q9H0R1 490 aa17.06■□□□□ 0.32
CLN8-209ENST00000635970 HAUS4Q9H6D7 363 aa17.06■□□□□ 0.32
CLN8-209ENST00000635970 ZSWIM4Q9H7M6 989 aa17.06■□□□□ 0.32
CLN8-209ENST00000635970 TARSL2A2RTX5 802 aaKnown RBP17.05■□□□□ 0.32
CLN8-209ENST00000635970 DNM1LO00429 736 aa17.05■□□□□ 0.32
CLN8-209ENST00000635970 N4BP3O15049 544 aa17.05■□□□□ 0.32
CLN8-209ENST00000635970 GH1P01241 217 aa17.05■□□□□ 0.32
CLN8-209ENST00000635970 TGFB3P10600 412 aa17.05■□□□□ 0.32
CLN8-209ENST00000635970 CIITAP33076 1130 aa17.05■□□□□ 0.32
CLN8-209ENST00000635970 AARSP49588 968 aaKnown RBP eCLIP17.05■□□□□ 0.32
CLN8-209ENST00000635970 FXR1P51114 621 aaKnown RBP eCLIP17.05■□□□□ 0.32
CLN8-209ENST00000635970 AMPD2Q01433 879 aa17.05■□□□□ 0.32
CLN8-209ENST00000635970 FSCN1Q16658 493 aaKnown RBP17.05■□□□□ 0.32
CLN8-209ENST00000635970 GNASQ5JWF2 1037 aa17.05■□□□□ 0.32
CLN8-209ENST00000635970 KLHL10Q6JEL2 608 aa17.05■□□□□ 0.32
CLN8-209ENST00000635970 KCNV1Q6PIU1 500 aa17.05■□□□□ 0.32
CLN8-209ENST00000635970 CYFIP1Q7L576 1253 aa17.05■□□□□ 0.32
CLN8-209ENST00000635970 NEK8Q86SG6 692 aa17.05■□□□□ 0.32
CLN8-209ENST00000635970 ARRDC4Q8NCT1 418 aa17.05■□□□□ 0.32
CLN8-209ENST00000635970 KLHDC9Q8NEP7 349 aa17.05■□□□□ 0.32
CLN8-209ENST00000635970 SYMPKQ92797 1274 aaKnown RBP17.05■□□□□ 0.32
CLN8-209ENST00000635970 PAWRQ96IZ0 340 aaKnown RBP17.05■□□□□ 0.32
CLN8-209ENST00000635970 SPC25Q9HBM1 224 aa17.05■□□□□ 0.32
CLN8-209ENST00000635970 TRAPPC10P48553 1259 aa17.04■□□□□ 0.32
CLN8-209ENST00000635970 USP11P51784 963 aa17.04■□□□□ 0.32
CLN8-209ENST00000635970 SP4Q02446 784 aa17.04■□□□□ 0.32
CLN8-209ENST00000635970 CELF3Q5SZQ8 465 aaKnown RBP17.04■□□□□ 0.32
CLN8-209ENST00000635970 CCSAPQ6IQ19 270 aaPredicted RBP17.04■□□□□ 0.32
CLN8-209ENST00000635970 USP49Q70CQ1 688 aa17.04■□□□□ 0.32
CLN8-209ENST00000635970 DHX37Q8IY37 1157 aaKnown RBP17.04■□□□□ 0.32
CLN8-209ENST00000635970 AFG1LQ8WV93 481 aa17.04■□□□□ 0.32
CLN8-209ENST00000635970 RRP15Q9Y3B9 282 aaKnown RBP17.04■□□□□ 0.32
CLN8-209ENST00000635970 Q9Y3F1 56 aa17.04■□□□□ 0.32
CLN8-209ENST00000635970 KBTBD13C9JR72 458 aa17.04■□□□□ 0.32
CLN8-209ENST00000635970 SLC37A4O43826 429 aa17.04■□□□□ 0.32
CLN8-209ENST00000635970 CST5P28325 142 aaPredicted RBP17.04■□□□□ 0.32
CLN8-209ENST00000635970 ARHGAP25P42331 645 aa17.04■□□□□ 0.32
CLN8-209ENST00000635970 AFMP43652 599 aa17.04■□□□□ 0.32
CLN8-209ENST00000635970 VSNL1P62760 191 aa17.04■□□□□ 0.32
CLN8-209ENST00000635970 ITGB3BPQ13352 177 aaPredicted RBP17.04■□□□□ 0.32
CLN8-209ENST00000635970 KRT31Q15323 416 aa17.04■□□□□ 0.32
CLN8-209ENST00000635970 KCNA10Q16322 511 aa17.04■□□□□ 0.32
CLN8-209ENST00000635970 HSDL1Q3SXM5 330 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms