RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 CASP10Q92851 521 aa10.54□□□□□ -0.72
SPTAN1-228ENST00000635853 TUBGCP2Q9BSJ2 902 aa10.54□□□□□ -0.72
SPTAN1-228ENST00000635853 URB2Q14146 1524 aaKnown RBP10.54□□□□□ -0.72
SPTAN1-228ENST00000635853 SGK1O00141 431 aa10.54□□□□□ -0.72
SPTAN1-228ENST00000635853 KDM1AO60341 852 aa10.54□□□□□ -0.72
SPTAN1-228ENST00000635853 MYBL2P10244 700 aa10.54□□□□□ -0.72
SPTAN1-228ENST00000635853 CHN1P15882 459 aa10.54□□□□□ -0.72
SPTAN1-228ENST00000635853 RPS8P62241 208 aaKnown RBP10.54□□□□□ -0.72
SPTAN1-228ENST00000635853 MYL7Q01449 175 aa10.54□□□□□ -0.72
SPTAN1-228ENST00000635853 ODR4Q5SWX8 454 aa10.54□□□□□ -0.72
SPTAN1-228ENST00000635853 SLFN13Q68D06 897 aa10.54□□□□□ -0.72
SPTAN1-228ENST00000635853 ZNF772Q68DY9 489 aaPredicted RBP10.54□□□□□ -0.72
SPTAN1-228ENST00000635853 BBOF1Q8ND07 529 aa10.54□□□□□ -0.72
SPTAN1-228ENST00000635853 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.54□□□□□ -0.72
SPTAN1-228ENST00000635853 CCDC124Q96CT7 223 aaKnown RBP10.54□□□□□ -0.72
SPTAN1-228ENST00000635853 XAB2Q9HCS7 855 aaKnown RBP10.54□□□□□ -0.72
SPTAN1-228ENST00000635853 SNX12Q9UMY4 172 aa10.54□□□□□ -0.72
SPTAN1-228ENST00000635853 AK9Q5TCS8 1911 aa10.54□□□□□ -0.72
SPTAN1-228ENST00000635853 A0A1B0GTH6 734 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 NPR1P16066 1061 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 MLH1P40692 756 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 C10orf76Q5T2E6 689 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 DSTYKQ6XUX3 929 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 TRIML2Q8N7C3 387 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 EZH1Q92800 747 aaPredicted RBP10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 MAML3Q96JK9 1138 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 CATSPER2Q96P56 530 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 ZSCAN10Q96SZ4 725 aaPredicted RBP10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 QTRT2Q9H974 415 aaKnown RBP10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 C2CD2Q9Y426 696 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 MCF2LO15068 1137 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 PPARGP37231 505 aaPredicted RBP10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 MFAP3P55082 362 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 ZBTB41Q5SVQ8 909 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 TRAPPC11Q7Z392 1133 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 FTCDO95954 541 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 RECQLP46063 649 aaPredicted RBP10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 PTK2BQ14289 1009 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 RSBN1LQ6PCB5 846 aaPredicted RBP10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 SLC17A8Q8NDX2 589 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 ATP6V0A1Q93050 837 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 PCDHA12Q9UN75 941 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 SLC4A7Q9Y6M7 1214 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 CIITAP33076 1130 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 PMS2P54278 862 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 PLTPP55058 493 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 INAQ16352 499 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 AOC3Q16853 763 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 TMTC3Q6ZXV5 915 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 KSR1Q8IVT5 923 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 YAF2Q8IY57 180 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 SLC10A4Q96EP9 437 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 SIKE1Q9BRV8 207 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 KRT82Q9NSB4 513 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 ARHGEF10O15013 1369 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 PDE5AO76074 875 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 EIF4A3P38919 411 aaKnown RBP10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 CTSWP56202 376 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 BYSLQ13895 437 aaKnown RBP10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 MFSD4BQ5TF39 518 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 NFRKBQ6P4R8 1299 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 DNAJC10Q8IXB1 793 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 DNAAF3Q8N9W5 541 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 TBC1D23Q9NUY8 699 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 SUGT1Q9Y2Z0 365 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 PCDHA1Q9Y5I3 950 aa10.53□□□□□ -0.72
SPTAN1-228ENST00000635853 NEMP1O14524 444 aa10.52□□□□□ -0.72
SPTAN1-228ENST00000635853 HNRNPDLO14979 420 aaKnown RBP10.52□□□□□ -0.72
SPTAN1-228ENST00000635853 SUPT3HO75486 399 aa10.52□□□□□ -0.72
SPTAN1-228ENST00000635853 KRT14P02533 472 aa10.52□□□□□ -0.72
SPTAN1-228ENST00000635853 IL13P35225 146 aa10.52□□□□□ -0.72
SPTAN1-228ENST00000635853 UBXN2AP68543 259 aa10.52□□□□□ -0.72
SPTAN1-228ENST00000635853 NR1I3Q14994 352 aa10.52□□□□□ -0.72
SPTAN1-228ENST00000635853 RAD9BQ6WBX8 426 aa10.52□□□□□ -0.72
SPTAN1-228ENST00000635853 C2orf69Q8N8R5 385 aa10.52□□□□□ -0.72
SPTAN1-228ENST00000635853 STAMQ92783 540 aa10.52□□□□□ -0.72
SPTAN1-228ENST00000635853 CNOT6LQ96LI5 555 aaKnown RBP10.52□□□□□ -0.72
SPTAN1-228ENST00000635853 TGS1Q96RS0 853 aaKnown RBP10.52□□□□□ -0.72
SPTAN1-228ENST00000635853 LRRC4Q9HBW1 653 aa10.52□□□□□ -0.72
SPTAN1-228ENST00000635853 ZNF185O15231 689 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 SASH1O94885 1247 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 ARL4AP40617 200 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 SLCO1A2P46721 670 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 DR1Q01658 176 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 PTPROQ16827 1216 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 ANKRD13CQ8N6S4 541 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 KBTBD3Q8NAB2 608 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 FBXL13Q8NEE6 735 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 CAVIN3Q969G5 261 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 SRPK1Q96SB4 655 aaKnown RBP10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 ZNF577Q9BSK1 485 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 TMBIM4Q9HC24 238 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 DIS3Q9Y2L1 958 aaKnown RBP10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 COL4A3BPQ9Y5P4 624 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 AGTP01019 485 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 GOLGA8HP0CJ92 632 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 HSPA8P11142 646 aaKnown RBP10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 HSPA9P38646 679 aaKnown RBP10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 BCAMP50895 628 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms