RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 CD4P01730 458 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 HOXC8P31273 242 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 AFMP43652 599 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 SLC12A3P55017 1021 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 FAM160B1Q5W0V3 765 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 SCAND2PQ9GZW5 306 aaPredicted RBP9.51□□□□□ -0.89
CDKL5-209ENST00000635828 A0A0U1RQG5 324 aaPredicted RBP9.51□□□□□ -0.89
CDKL5-209ENST00000635828 C17orf102A2RUQ5 167 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 ZEB2O60315 1214 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 MBTPS1Q14703 1052 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 EFCAB12Q6NXP0 572 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 DAW1Q8N136 415 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 GPT2Q8TD30 523 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 HPSEQ9Y251 543 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 ATP6V1DQ9Y5K8 247 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 TTLL13PA6NNM8 815 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 IQCF3P0C7M6 154 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 KIZQ2M2Z5 673 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 XKR3Q5GH77 459 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 KIAA0319LQ8IZA0 1049 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 BBXQ8WY36 941 aaPredicted RBP9.51□□□□□ -0.89
CDKL5-209ENST00000635828 WNT8AQ9H1J5 351 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 KCNH3Q9ULD8 1083 aa9.51□□□□□ -0.89
CDKL5-209ENST00000635828 MYH11P35749 1972 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 PLA2G4BP0C869 781 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 ZNF618Q5T7W0 954 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 RINT1Q6NUQ1 792 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 DPF3Q92784 378 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 TUFT1Q9NNX1 390 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 MYMKA6NI61 221 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 CHRNA1P02708 482 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 EDN1P05305 212 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 SNX17Q15036 470 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 CAMK4Q16566 473 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 NIFKQ9BYG3 293 aaKnown RBP9.5□□□□□ -0.89
CDKL5-209ENST00000635828 CCSER1Q9C0I3 900 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 PDLIM7Q9NR12 457 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 ADGRA3Q8IWK6 1321 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 NRCAMQ92823 1304 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 ACTN4O43707 911 aaKnown RBP9.5□□□□□ -0.89
CDKL5-209ENST00000635828 HBP1O60381 514 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 THPOP40225 353 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 HYIQ5T013 277 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 RRAGBQ5VZM2 374 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 HAUS3Q68CZ6 603 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 ISM2Q6H9L7 571 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 TRAF7Q6Q0C0 670 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 PADI6Q6TGC4 694 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 TMCO2Q7Z6W1 182 aaPredicted RBP9.5□□□□□ -0.89
CDKL5-209ENST00000635828 ANKLE1Q8NAG6 615 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 ENGASEQ8NFI3 743 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 ASAP3Q8TDY4 903 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 MINDY3Q9H8M7 445 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 TBC1D7Q9P0N9 293 aa9.5□□□□□ -0.89
CDKL5-209ENST00000635828 MBLAC1A4D2B0 266 aaPredicted RBP9.49□□□□□ -0.89
CDKL5-209ENST00000635828 BMP15O95972 392 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 PDIA4P13667 645 aaKnown RBP9.49□□□□□ -0.89
CDKL5-209ENST00000635828 EPHB4P54760 987 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 MDM2Q00987 491 aaPredicted RBP9.49□□□□□ -0.89
CDKL5-209ENST00000635828 TBC1D8BQ0IIM8 1120 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 CUL4BQ13620 913 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 TRIM71Q2Q1W2 868 aaKnown RBP9.49□□□□□ -0.89
CDKL5-209ENST00000635828 RHPN2Q8IUC4 686 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 RAD54LQ92698 747 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 CDK5RAP3Q96JB5 506 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 RTN4Q9NQC3 1192 aaKnown RBP9.49□□□□□ -0.89
CDKL5-209ENST00000635828 CKBP12277 381 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 CYP11B2P19099 503 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 CMA1P23946 247 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 STAT6P42226 847 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 POLGP54098 1239 aaPredicted RBP9.49□□□□□ -0.89
CDKL5-209ENST00000635828 MAPK7Q13164 816 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 EMC2Q15006 297 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 ATL3Q6DD88 541 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 C1orf186Q6ZWK4 172 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 ANKRD33Q7Z3H0 272 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 SERINC5Q86VE9 423 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 CDR2LQ86X02 465 aaPredicted RBP9.49□□□□□ -0.89
CDKL5-209ENST00000635828 FMR1NBQ8N0W7 255 aaPredicted RBP9.49□□□□□ -0.89
CDKL5-209ENST00000635828 RDM1Q8NG50 284 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 ERMNQ8TAM6 284 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 LARP4BQ92615 738 aaKnown RBP9.49□□□□□ -0.89
CDKL5-209ENST00000635828 AK8Q96MA6 479 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 OSMRQ99650 979 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 REEP2Q9BRK0 252 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 KATNAL1Q9BW62 490 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 RAB34Q9BZG1 259 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 DHX33Q9H6R0 707 aaKnown RBP9.49□□□□□ -0.89
CDKL5-209ENST00000635828 DNM3Q9UQ16 869 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 ZNF202O95125 648 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 SRGAP2CP0DJJ0 459 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 ACRP10323 421 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 FAM102BQ5T8I3 360 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 LINC01465Q8N7H1 131 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 PRPF31Q8WWY3 499 aaKnown RBP9.49□□□□□ -0.89
CDKL5-209ENST00000635828 NLRP4Q96MN2 994 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 NACC1Q96RE7 527 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 NOD1Q9Y239 953 aa9.49□□□□□ -0.89
CDKL5-209ENST00000635828 DEFB128Q7Z7B8 93 aa9.48□□□□□ -0.89
CDKL5-209ENST00000635828 GPBP1Q86WP2 473 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms