RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 POTEEQ6S8J3 1075 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 LRRC55Q6ZSA7 311 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 SPICE1Q8N0Z3 855 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 SPIRE2Q8WWL2 714 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 CAPZA3Q96KX2 299 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 SIK3Q9Y2K2 1263 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 C4BP0C0L5 1744 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 SYNGAP1Q96PV0 1343 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 FRMD3A2A2Y4 597 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 UCHL3P15374 230 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 ATP6V0A4Q9HBG4 840 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 CD2APQ9Y5K6 639 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 MAST2Q6P0Q8 1798 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 TESPA1A2RU30 521 aaPredicted RBP4.95□□□□□ -1.62
SCN1A-210ENST00000635776 PODXLO00592 558 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 MEIS2O14770 477 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 LIG4P49917 911 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 CACNB3P54284 484 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 RTP1P59025 263 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 PAXIP1Q6ZW49 1069 aaPredicted RBP4.95□□□□□ -1.62
SCN1A-210ENST00000635776 PTF1AQ7RTS3 328 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 APTXQ7Z2E3 356 aaKnown RBP4.95□□□□□ -1.62
SCN1A-210ENST00000635776 ETNPPLQ8TBG4 499 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 TMC2Q8TDI7 906 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 SCFD1Q8WVM8 642 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 RMDN3Q96TC7 470 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 MRPL47Q9HD33 250 aaKnown RBP4.95□□□□□ -1.62
SCN1A-210ENST00000635776 PPP1R9AQ9ULJ8 1098 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 RBAK-RBAKDNI3L0D1 243 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 P4HA1P13674 534 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 POLR2BP30876 1174 aaKnown RBP4.95□□□□□ -1.62
SCN1A-210ENST00000635776 IRX3P78415 501 aaPredicted RBP4.95□□□□□ -1.62
SCN1A-210ENST00000635776 ARID5AQ03989 594 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 KLHDC7AQ5VTJ3 777 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 RINT1Q6NUQ1 792 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 SMIM5Q71RC9 77 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 U2AF1L4Q8WU68 220 aaKnown RBP4.95□□□□□ -1.62
SCN1A-210ENST00000635776 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.95□□□□□ -1.62
SCN1A-210ENST00000635776 C2orf40Q9H1Z8 148 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 KMT5AQ9NQR1 393 aa4.95□□□□□ -1.62
SCN1A-210ENST00000635776 CEP104O60308 925 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 SOX5P35711 763 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 BFSP1Q12934 665 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 TERF2Q15554 542 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 ZCWPW2Q504Y3 356 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 OSBPL9Q96SU4 736 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 RNF146Q9NTX7 359 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 SLC5A4Q9NY91 659 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 UVRAGQ9P2Y5 699 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 PPP1R1BQ9UD71 204 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-210ENST00000635776 SCINQ9Y6U3 715 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 GOLGA6CA6NDK9 693 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 FAM187AA6NFU0 413 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 PRPF6O94906 941 aaKnown RBP4.94□□□□□ -1.62
SCN1A-210ENST00000635776 SLC25A27O95847 323 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 GAS8O95995 478 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 GOLGA6DP0CG33 693 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 TBXAS1P24557 533 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-210ENST00000635776 LMAN1P49257 510 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 EHHADHQ08426 723 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 CASP8Q14790 479 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 OTOP1Q7RTM1 612 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 FAM133AQ8N9E0 248 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 ZNF280CQ8ND82 737 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 GOLGA6AQ9NYA3 693 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 ADAMTS1Q9UHI8 967 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 THSD7AQ9UPZ6 1657 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 DDX60Q8IY21 1712 aaKnown RBP4.94□□□□□ -1.62
SCN1A-210ENST00000635776 ZNF233A6NK53 670 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 ZNF189O75820 626 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-210ENST00000635776 CAPN2P17655 700 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 HOXA13P31271 388 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-210ENST00000635776 IREB2P48200 963 aaKnown RBP4.94□□□□□ -1.62
SCN1A-210ENST00000635776 CYP2J2P51589 502 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 EFNA5P52803 228 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 GOLGA8FQ08AF8 430 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 GOLGA8DPQ0D2H9 430 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 ENOX2Q16206 610 aaKnown RBP4.94□□□□□ -1.62
SCN1A-210ENST00000635776 HAUS6Q7Z4H7 955 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 DAAM2Q86T65 1068 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-210ENST00000635776 CEP170P1Q96L14 293 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 PMM2O15305 246 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 CTTNQ14247 550 aaKnown RBP4.94□□□□□ -1.62
SCN1A-210ENST00000635776 ZYXQ15942 572 aaKnown RBP4.94□□□□□ -1.62
SCN1A-210ENST00000635776 IRF2BP1Q8IU81 584 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 SULF1Q8IWU6 871 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 MTRQ99707 1265 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 HSD17B14Q9BPX1 270 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 DNAJC12Q9UKB3 198 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 POLR3GO15318 223 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-210ENST00000635776 MED24O75448 989 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 HOXC6P09630 235 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 CHRNA5P30532 468 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 MTF1Q14872 753 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 FAM102BQ5T8I3 360 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 B4GALNT4Q76KP1 1039 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 DNERQ8NFT8 737 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 COG1Q8WTW3 980 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 DCPSQ96C86 337 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms