RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 A0A1W2PQD8 194 aa9.16□□□□□ -0.94
SMARCA2-239ENST00000635388 ZNF891A8MT65 544 aaPredicted RBP9.16□□□□□ -0.94
SMARCA2-239ENST00000635388 EXOC5O00471 708 aa9.16□□□□□ -0.94
SMARCA2-239ENST00000635388 NKRFO15226 690 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMARCA2-239ENST00000635388 SRGAP3O43295 1099 aa9.16□□□□□ -0.94
SMARCA2-239ENST00000635388 APPP05067 770 aa9.16□□□□□ -0.94
SMARCA2-239ENST00000635388 DBHP09172 617 aa9.16□□□□□ -0.94
SMARCA2-239ENST00000635388 PDE6AP16499 860 aa9.16□□□□□ -0.94
SMARCA2-239ENST00000635388 IBSPP21815 317 aaPredicted RBP9.16□□□□□ -0.94
SMARCA2-239ENST00000635388 EZH2Q15910 746 aaKnown RBP9.16□□□□□ -0.94
SMARCA2-239ENST00000635388 EMC4Q5J8M3 183 aa9.16□□□□□ -0.94
SMARCA2-239ENST00000635388 OTOP1Q7RTM1 612 aa9.16□□□□□ -0.94
SMARCA2-239ENST00000635388 CHST14Q8NCH0 376 aa9.16□□□□□ -0.94
SMARCA2-239ENST00000635388 ZFP64Q9NPA5 681 aa9.16□□□□□ -0.94
SMARCA2-239ENST00000635388 ATP8A1Q9Y2Q0 1164 aa9.16□□□□□ -0.94
SMARCA2-239ENST00000635388 COA3Q9Y2R0 106 aaPredicted RBP9.16□□□□□ -0.94
SMARCA2-239ENST00000635388 INSRP06213 1382 aa9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 GNAT1P11488 350 aa9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 COL6A2P12110 1019 aa9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 BPIP17213 487 aa9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 SLC6A11P48066 632 aa9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 CDKN1CP49918 316 aaPredicted RBP9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 ST5P78524 1137 aa9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 NFKB2Q00653 900 aa9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 CT47A1Q5JQC4 288 aaPredicted RBP9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 CREB3L3Q68CJ9 461 aa9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 DDX46Q7L014 1031 aaKnown RBP9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 DDX42Q86XP3 938 aaKnown RBP eCLIP9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 SIRT2Q8IXJ6 389 aa9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 NETO2Q8NC67 525 aa9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 ABHD4Q8TB40 342 aa9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 PIP4K2CQ8TBX8 421 aa9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 USP33Q8TEY7 942 aa9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 CAMKK2Q96RR4 588 aa9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 B4GALT6Q9UBX8 382 aa9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 YBX2Q9Y2T7 364 aaKnown RBP9.15□□□□□ -0.94
SMARCA2-239ENST00000635388 ITGB4P16144 1822 aa9.15□□□□□ -0.95
SMARCA2-239ENST00000635388 NSD2O96028 1365 aa9.14□□□□□ -0.95
SMARCA2-239ENST00000635388 GSTA4O15217 222 aa9.14□□□□□ -0.95
SMARCA2-239ENST00000635388 F2P00734 622 aa9.14□□□□□ -0.95
SMARCA2-239ENST00000635388 AFMP43652 599 aa9.14□□□□□ -0.95
SMARCA2-239ENST00000635388 JAM2P57087 298 aa9.14□□□□□ -0.95
SMARCA2-239ENST00000635388 ERVFRD-1P60508 538 aa9.14□□□□□ -0.95
SMARCA2-239ENST00000635388 IGBP1P78318 339 aa9.14□□□□□ -0.95
SMARCA2-239ENST00000635388 GPR19Q15760 415 aa9.14□□□□□ -0.95
SMARCA2-239ENST00000635388 BICRALQ6AI39 1079 aa9.14□□□□□ -0.95
SMARCA2-239ENST00000635388 FSTL4Q6MZW2 842 aa9.14□□□□□ -0.95
SMARCA2-239ENST00000635388 UHMK1Q8TAS1 419 aaKnown RBP9.14□□□□□ -0.95
SMARCA2-239ENST00000635388 PANK3Q9H999 370 aa9.14□□□□□ -0.95
SMARCA2-239ENST00000635388 SLC6A20Q9NP91 592 aa9.14□□□□□ -0.95
SMARCA2-239ENST00000635388 CATSPERZQ9NTU4 200 aa9.14□□□□□ -0.95
SMARCA2-239ENST00000635388 KIF7Q2M1P5 1343 aa9.13□□□□□ -0.95
SMARCA2-239ENST00000635388 PPM1GO15355 546 aaPredicted RBP9.13□□□□□ -0.95
SMARCA2-239ENST00000635388 DGKIO75912 1065 aa9.13□□□□□ -0.95
SMARCA2-239ENST00000635388 SPIRE1Q08AE8 756 aa9.13□□□□□ -0.95
SMARCA2-239ENST00000635388 CRY1Q16526 586 aa9.13□□□□□ -0.95
SMARCA2-239ENST00000635388 HSP90AB2PQ58FF8 381 aa9.13□□□□□ -0.95
SMARCA2-239ENST00000635388 HHIPL2Q6UWX4 724 aa9.13□□□□□ -0.95
SMARCA2-239ENST00000635388 ATG4DQ86TL0 474 aaPredicted RBP9.13□□□□□ -0.95
SMARCA2-239ENST00000635388 OSTM1Q86WC4 334 aa9.13□□□□□ -0.95
SMARCA2-239ENST00000635388 NXPE1Q8N323 547 aa9.13□□□□□ -0.95
SMARCA2-239ENST00000635388 PRPF38AQ8NAV1 312 aaKnown RBP9.13□□□□□ -0.95
SMARCA2-239ENST00000635388 PANK1Q8TE04 598 aa9.13□□□□□ -0.95
SMARCA2-239ENST00000635388 KIRREL1Q96J84 757 aa9.13□□□□□ -0.95
SMARCA2-239ENST00000635388 TOGARAM1Q9Y4F4 1720 aa9.13□□□□□ -0.95
SMARCA2-239ENST00000635388 TUBGCP6Q96RT7 1819 aa9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 CASZ1Q86V15 1759 aa9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 LY75O60449 1722 aa9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 MAN2B1O00754 1011 aa9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 TADA3O75528 432 aa9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 TNNT2P45379 298 aaPredicted RBP9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 STRN3Q13033 797 aa9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 R3HDM1Q15032 1099 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 PTF1AQ7RTS3 328 aa9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 CABP7Q86V35 215 aa9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 NOSTRINQ8IVI9 506 aa9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 SMC1BQ8NDV3 1235 aa9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 INTS4Q96HW7 963 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 CABP5Q9NP86 173 aa9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 SRPK3Q9UPE1 567 aa9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 SIT1Q9Y3P8 196 aa9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 NCAPD2Q15021 1401 aa9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 PAPPAQ13219 1627 aa9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 VIRMAQ69YN4 1812 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-239ENST00000635388 SGSM2O43147 1006 aa9.11□□□□□ -0.95
SMARCA2-239ENST00000635388 CYBBP04839 570 aa9.11□□□□□ -0.95
SMARCA2-239ENST00000635388 ZBTB48P10074 688 aaPredicted RBP9.11□□□□□ -0.95
SMARCA2-239ENST00000635388 CDK11BP21127 795 aaKnown RBP9.11□□□□□ -0.95
SMARCA2-239ENST00000635388 ANAPC15P60006 121 aa9.11□□□□□ -0.95
SMARCA2-239ENST00000635388 CYP4F22Q6NT55 531 aa9.11□□□□□ -0.95
SMARCA2-239ENST00000635388 ARHGAP36Q6ZRI8 547 aa9.11□□□□□ -0.95
SMARCA2-239ENST00000635388 LHFPL2Q6ZUX7 228 aa9.11□□□□□ -0.95
SMARCA2-239ENST00000635388 DCP2Q8IU60 420 aaKnown RBP9.11□□□□□ -0.95
SMARCA2-239ENST00000635388 OR2W6PQ8NHA6 318 aa9.11□□□□□ -0.95
SMARCA2-239ENST00000635388 STAG1Q8WVM7 1258 aa9.11□□□□□ -0.95
SMARCA2-239ENST00000635388 RAPGEF4Q8WZA2 1011 aa9.11□□□□□ -0.95
SMARCA2-239ENST00000635388 SEC14L1Q92503 715 aa9.11□□□□□ -0.95
SMARCA2-239ENST00000635388 RXFP1Q9HBX9 757 aa9.11□□□□□ -0.95
SMARCA2-239ENST00000635388 ZNF652Q9Y2D9 606 aa9.11□□□□□ -0.95
SMARCA2-239ENST00000635388 KNSTRNQ9Y448 316 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms