RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 CALR3Q96L12 384 aaKnown RBP11.67□□□□□ -0.54
PSPC1-207ENST00000635251 KCNQ5Q9NR82 932 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 FAM198AQ9UFP1 575 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 UBR3Q6ZT12 1888 aa11.67□□□□□ -0.54
PSPC1-207ENST00000635251 HMGB1P1B2RPK0 211 aaPredicted RBP11.66□□□□□ -0.54
PSPC1-207ENST00000635251 CCDC188H7C350 402 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 DDX3XO00571 662 aaKnown RBP eCLIP11.66□□□□□ -0.54
PSPC1-207ENST00000635251 ALDH1B1P30837 517 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 CIITAP33076 1130 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 PACS2Q86VP3 889 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 SEPT12Q8IYM1 358 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 GMCL1P1Q8NEA9 526 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 GMCL1Q96IK5 515 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 OLFML3Q9NRN5 406 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 AMFRQ9UKV5 643 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 A0A0A6YYK5 440 aaPredicted RBP11.66□□□□□ -0.54
PSPC1-207ENST00000635251 UBAP1LF5GYI3 381 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 GCOM1H8Y6P7 765 aaPredicted RBP11.66□□□□□ -0.54
PSPC1-207ENST00000635251 TGFB1I1O43294 461 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 EVI5O60447 810 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 MYZAPP0CAP1 466 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 HPDP32754 393 aaPredicted RBP11.66□□□□□ -0.54
PSPC1-207ENST00000635251 CTNNA1P35221 906 aaKnown RBP11.66□□□□□ -0.54
PSPC1-207ENST00000635251 LIG3P49916 1009 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 GALCP54803 685 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 ZC2HC1CQ53FD0 456 aaPredicted RBP11.66□□□□□ -0.54
PSPC1-207ENST00000635251 SLC27A3Q5K4L6 730 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 TATDN1Q6P1N9 297 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 SLC30A10Q6XR72 485 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 B4GALNT4Q76KP1 1039 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 SH3BP5LQ7L8J4 393 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 CCDC26Q8TAB7 109 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 UBLCP1Q8WVY7 318 aaPredicted RBP11.66□□□□□ -0.54
PSPC1-207ENST00000635251 DYDC2Q96IM9 177 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 IKZF4Q9H2S9 585 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 SEPT11Q9NVA2 429 aaKnown RBP11.66□□□□□ -0.54
PSPC1-207ENST00000635251 SUCLA2Q9P2R7 463 aaPredicted RBP11.66□□□□□ -0.54
PSPC1-207ENST00000635251 INTUQ9ULD6 942 aa11.66□□□□□ -0.54
PSPC1-207ENST00000635251 KIF13BQ9NQT8 1826 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 GTPBP10A4D1E9 387 aaKnown RBP11.65□□□□□ -0.54
PSPC1-207ENST00000635251 EIF3DO15371 548 aaKnown RBP eCLIP11.65□□□□□ -0.54
PSPC1-207ENST00000635251 KIAA0754O94854 1291 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 ERLIN2O94905 339 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 CFBP00751 764 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 LMNB1P20700 586 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 LSP1P33241 339 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 SOX5P35711 763 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 HSD17B3P37058 310 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 RBM26Q5T8P6 1007 aaKnown RBP11.65□□□□□ -0.54
PSPC1-207ENST00000635251 LRCH2Q5VUJ6 765 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 LRIG3Q6UXM1 1119 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 PODNQ7Z5L7 613 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 GLYCTKQ8IVS8 523 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 KSR1Q8IVT5 923 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 SPICE1Q8N0Z3 855 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 EIF1ADQ8N9N8 165 aaKnown RBP11.65□□□□□ -0.54
PSPC1-207ENST00000635251 IDI2Q9BXS1 227 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 TMBIM4Q9HC24 238 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 AMACRQ9UHK6 382 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 DNAJC12Q9UKB3 198 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 ATP8B3O60423 1300 aa11.65□□□□□ -0.54
PSPC1-207ENST00000635251 FAM170AA1A519 330 aa11.65□□□□□ -0.55
PSPC1-207ENST00000635251 GH2P01242 217 aa11.65□□□□□ -0.55
PSPC1-207ENST00000635251 CYP3A4P08684 503 aa11.65□□□□□ -0.55
PSPC1-207ENST00000635251 ITGA4P13612 1032 aa11.65□□□□□ -0.55
PSPC1-207ENST00000635251 ABCB4P21439 1286 aa11.65□□□□□ -0.55
PSPC1-207ENST00000635251 INPP5BP32019 993 aa11.65□□□□□ -0.55
PSPC1-207ENST00000635251 MMP14P50281 582 aa11.65□□□□□ -0.55
PSPC1-207ENST00000635251 CYP2J2P51589 502 aa11.65□□□□□ -0.55
PSPC1-207ENST00000635251 DRAP1Q14919 205 aaPredicted RBP11.65□□□□□ -0.55
PSPC1-207ENST00000635251 STXBP4Q6ZWJ1 553 aa11.65□□□□□ -0.55
PSPC1-207ENST00000635251 NT5DC3Q86UY8 548 aa11.65□□□□□ -0.55
PSPC1-207ENST00000635251 OR2W6PQ8NHA6 318 aa11.65□□□□□ -0.55
PSPC1-207ENST00000635251 LNX1Q8TBB1 728 aaPredicted RBP11.65□□□□□ -0.55
PSPC1-207ENST00000635251 EPN3Q9H201 632 aa11.65□□□□□ -0.55
PSPC1-207ENST00000635251 PARVGQ9HBI0 331 aa11.65□□□□□ -0.55
PSPC1-207ENST00000635251 TUFT1Q9NNX1 390 aa11.65□□□□□ -0.55
PSPC1-207ENST00000635251 BCCIPQ9P287 314 aaKnown RBP eCLIP11.65□□□□□ -0.55
PSPC1-207ENST00000635251 NENFQ9UMX5 172 aa11.65□□□□□ -0.55
PSPC1-207ENST00000635251 STXBP5LQ9Y2K9 1186 aa11.65□□□□□ -0.55
PSPC1-207ENST00000635251 FRMD4BQ9Y2L6 1034 aa11.65□□□□□ -0.55
PSPC1-207ENST00000635251 ZMYM2Q9UBW7 1377 aa11.64□□□□□ -0.55
PSPC1-207ENST00000635251 F8VZ95 297 aa11.64□□□□□ -0.55
PSPC1-207ENST00000635251 OPLAHO14841 1288 aa11.64□□□□□ -0.55
PSPC1-207ENST00000635251 PPP1R37O75864 691 aa11.64□□□□□ -0.55
PSPC1-207ENST00000635251 ECHS1P30084 290 aa11.64□□□□□ -0.55
PSPC1-207ENST00000635251 MDH1P40925 334 aaKnown RBP11.64□□□□□ -0.55
PSPC1-207ENST00000635251 FMO5P49326 533 aa11.64□□□□□ -0.55
PSPC1-207ENST00000635251 NPEPPSP55786 919 aa11.64□□□□□ -0.55
PSPC1-207ENST00000635251 PRPF4BQ13523 1007 aaKnown RBP11.64□□□□□ -0.55
PSPC1-207ENST00000635251 COG2Q14746 738 aa11.64□□□□□ -0.55
PSPC1-207ENST00000635251 HS2ST1Q7LGA3 356 aa11.64□□□□□ -0.55
PSPC1-207ENST00000635251 SLFN11Q7Z7L1 901 aa11.64□□□□□ -0.55
PSPC1-207ENST00000635251 FAM178BQ8IXR5 827 aa11.64□□□□□ -0.55
PSPC1-207ENST00000635251 RASGEF1CQ8N431 466 aa11.64□□□□□ -0.55
PSPC1-207ENST00000635251 ARFGAP2Q8N6H7 521 aa11.64□□□□□ -0.55
PSPC1-207ENST00000635251 CTNNBL1Q8WYA6 563 aaPredicted RBP11.64□□□□□ -0.55
PSPC1-207ENST00000635251 ZNF622Q969S3 477 aaKnown RBP eCLIP11.64□□□□□ -0.55
PSPC1-207ENST00000635251 NEUROG2Q9H2A3 272 aa11.64□□□□□ -0.55
PSPC1-207ENST00000635251 SLITRK6Q9H5Y7 841 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms