RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 GPBP1Q86WP2 473 aa16.05■□□□□ 0.16
LINC00339-208ENST00000634934 TRAPPC12Q8WVT3 735 aa16.05■□□□□ 0.16
LINC00339-208ENST00000634934 PAGE5Q96GU1 130 aa16.05■□□□□ 0.16
LINC00339-208ENST00000634934 TIGD1Q96MW7 591 aa16.05■□□□□ 0.16
LINC00339-208ENST00000634934 SETD4Q9NVD3 440 aa16.05■□□□□ 0.16
LINC00339-208ENST00000634934 ALPK3Q96L96 1907 aa16.05■□□□□ 0.16
LINC00339-208ENST00000634934 USO1O60763 962 aaKnown RBP16.04■□□□□ 0.16
LINC00339-208ENST00000634934 KRT18P05783 430 aaKnown RBP16.04■□□□□ 0.16
LINC00339-208ENST00000634934 POLGP54098 1239 aaPredicted RBP16.04■□□□□ 0.16
LINC00339-208ENST00000634934 AMPD3Q01432 767 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 GRIK4Q16099 956 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 CAMK4Q16566 473 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 KANK3Q6NY19 840 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 ANKLE1Q8NAG6 615 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 FUCA2Q9BTY2 467 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 RUSC1Q9BVN2 902 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 TNMDQ9H2S6 317 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 STARD7Q9NQZ5 370 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 KBTBD4Q9NVX7 518 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 ZBTB42B2RXF5 422 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 RAD51AP2Q09MP3 1159 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 TBC1D8BQ0IIM8 1120 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 ITGA7Q13683 1181 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 TARBP2Q15633 366 aaKnown RBP16.04■□□□□ 0.16
LINC00339-208ENST00000634934 RINT1Q6NUQ1 792 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 MAEAQ7L5Y9 396 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 MTRQ99707 1265 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 LRRC27Q9C0I9 530 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 BLZF1Q9H2G9 400 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 CLSTN2Q9H4D0 955 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 HDAC6Q9UBN7 1215 aa16.04■□□□□ 0.16
LINC00339-208ENST00000634934 HOOK1Q9UJC3 728 aaKnown RBP16.04■□□□□ 0.16
LINC00339-208ENST00000634934 WDR81Q562E7 1941 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 NPHP3-ACAD11A0A0J9YXS1 232 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 C17orf102A2RUQ5 167 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 MYMKA6NI61 221 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 RRN3P2A6NIE6 340 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 DGAT1O75907 488 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 TPM3P06753 285 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 COL6A1P12109 1028 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 CYP11B2P19099 503 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 CASP1P29466 404 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 RFC5P40937 340 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 C1orf186Q6ZWK4 172 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 DYMQ7RTS9 669 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 NECAB2Q7Z6G3 386 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 LMBR1Q8WVP7 490 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 SLC7A3Q8WY07 619 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 ZBTB10Q96DT7 871 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 NUP62CLQ9H1M0 184 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 C11orf49Q9H6J7 331 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 ATP6V0A4Q9HBG4 840 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 NRCAMQ92823 1304 aa16.03■□□□□ 0.16
LINC00339-208ENST00000634934 COL1A2P08123 1366 aa16.02■□□□□ 0.16
LINC00339-208ENST00000634934 A0A0U1RQG5 324 aaPredicted RBP16.02■□□□□ 0.15
LINC00339-208ENST00000634934 PRR29P0C7W0 189 aa16.02■□□□□ 0.15
LINC00339-208ENST00000634934 KLRC1P26715 233 aa16.02■□□□□ 0.15
LINC00339-208ENST00000634934 CACNB1Q02641 598 aaPredicted RBP16.02■□□□□ 0.15
LINC00339-208ENST00000634934 MLLT1Q03111 559 aaPredicted RBP16.02■□□□□ 0.15
LINC00339-208ENST00000634934 PNOCQ13519 176 aa16.02■□□□□ 0.15
LINC00339-208ENST00000634934 EMC2Q15006 297 aa16.02■□□□□ 0.15
LINC00339-208ENST00000634934 POSTNQ15063 836 aa16.02■□□□□ 0.15
LINC00339-208ENST00000634934 ARSHQ5FYA8 562 aa16.02■□□□□ 0.15
LINC00339-208ENST00000634934 SH3RF1Q7Z6J0 888 aa16.02■□□□□ 0.15
LINC00339-208ENST00000634934 DDX12PQ92771 950 aa16.02■□□□□ 0.15
LINC00339-208ENST00000634934 CEP89Q96ST8 783 aa16.02■□□□□ 0.15
LINC00339-208ENST00000634934 SENP6Q9GZR1 1112 aaPredicted RBP16.02■□□□□ 0.15
LINC00339-208ENST00000634934 SUGCTQ9HAC7 445 aa16.02■□□□□ 0.15
LINC00339-208ENST00000634934 POLD4Q9HCU8 107 aa16.02■□□□□ 0.15
LINC00339-208ENST00000634934 KCND2Q9NZV8 630 aa16.02■□□□□ 0.15
LINC00339-208ENST00000634934 PPME1Q9Y570 386 aa16.02■□□□□ 0.15
LINC00339-208ENST00000634934 GRIN2DO15399 1336 aa16.02■□□□□ 0.15
LINC00339-208ENST00000634934 GTPBP6O43824 516 aaPredicted RBP16.01■□□□□ 0.15
LINC00339-208ENST00000634934 C22orf31O95567 290 aa16.01■□□□□ 0.15
LINC00339-208ENST00000634934 GNAT1P11488 350 aa16.01■□□□□ 0.15
LINC00339-208ENST00000634934 ASIC1P78348 528 aa16.01■□□□□ 0.15
LINC00339-208ENST00000634934 ZNF200P98182 395 aaPredicted RBP16.01■□□□□ 0.15
LINC00339-208ENST00000634934 CUL4BQ13620 913 aa16.01■□□□□ 0.15
LINC00339-208ENST00000634934 FAM102BQ5T8I3 360 aa16.01■□□□□ 0.15
LINC00339-208ENST00000634934 NFRKBQ6P4R8 1299 aa16.01■□□□□ 0.15
LINC00339-208ENST00000634934 MTHFD1LQ6UB35 978 aa16.01■□□□□ 0.15
LINC00339-208ENST00000634934 METTL13Q8N6R0 699 aa16.01■□□□□ 0.15
LINC00339-208ENST00000634934 ERCC4Q92889 916 aaPredicted RBP16.01■□□□□ 0.15
LINC00339-208ENST00000634934 C7orf25Q9BPX7 421 aa16.01■□□□□ 0.15
LINC00339-208ENST00000634934 TRIM9Q9C026 710 aa16.01■□□□□ 0.15
LINC00339-208ENST00000634934 ZHX3Q9H4I2 956 aa16.01■□□□□ 0.15
LINC00339-208ENST00000634934 DHX33Q9H6R0 707 aaKnown RBP16.01■□□□□ 0.15
LINC00339-208ENST00000634934 TUBE1Q9UJT0 475 aa16.01■□□□□ 0.15
LINC00339-208ENST00000634934 SCN10AQ9Y5Y9 1956 aa16■□□□□ 0.15
LINC00339-208ENST00000634934 MAGEB2O15479 319 aa16■□□□□ 0.15
LINC00339-208ENST00000634934 MAFO75444 373 aaPredicted RBP16■□□□□ 0.15
LINC00339-208ENST00000634934 IDEP14735 1019 aa16■□□□□ 0.15
LINC00339-208ENST00000634934 ATN1P54259 1190 aaPredicted RBP16■□□□□ 0.15
LINC00339-208ENST00000634934 MDM2Q00987 491 aaPredicted RBP16■□□□□ 0.15
LINC00339-208ENST00000634934 HIC1Q14526 733 aa16■□□□□ 0.15
LINC00339-208ENST00000634934 MARCH8Q5T0T0 291 aa16■□□□□ 0.15
LINC00339-208ENST00000634934 EXOC8Q8IYI6 725 aa16■□□□□ 0.15
LINC00339-208ENST00000634934 LRRC71Q8N4P6 559 aa16■□□□□ 0.15
LINC00339-208ENST00000634934 RETREG2Q8NC44 543 aa16■□□□□ 0.15
LINC00339-208ENST00000634934 MCPH1Q8NEM0 835 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms