RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 LUC7L3O95232 432 aaKnown RBP12.59□□□□□ -0.39
SHPRH-211ENST00000629427 PLEKHA8P1O95397 391 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 ACSL3O95573 720 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 PAPOLAP51003 745 aaKnown RBP12.59□□□□□ -0.39
SHPRH-211ENST00000629427 SNRNP48Q6IEG0 339 aaKnown RBP12.59□□□□□ -0.39
SHPRH-211ENST00000629427 SERPINI1Q99574 410 aa12.58□□□□□ -0.39
SHPRH-211ENST00000629427 SYNMO15061 1565 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 CTNND1O60716 968 aaKnown RBP12.58□□□□□ -0.4
SHPRH-211ENST00000629427 GCKP35557 465 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 FRMD3A2A2Y4 597 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 E5RI56 91 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 F5H423 210 aaPredicted RBP12.58□□□□□ -0.4
SHPRH-211ENST00000629427 KIF23Q02241 960 aaPredicted RBP12.58□□□□□ -0.4
SHPRH-211ENST00000629427 RASGRF1Q13972 1273 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 DCAF4L1Q3SXM0 396 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 TMEM259Q4ZIN3 620 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 RABGGTAQ92696 567 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 ZMYND12Q9H0C1 365 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 COG4Q9H9E3 785 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 MID2Q9UJV3 735 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 ANKARQ7Z5J8 1434 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 MAP2K2P36507 400 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 NME3Q13232 169 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 APOBEC3FQ8IUX4 373 aaKnown RBP12.58□□□□□ -0.4
SHPRH-211ENST00000629427 PDIK1LQ8N165 341 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 VPS39Q96JC1 886 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 ZBTB18Q99592 522 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 SCINQ9Y6U3 715 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 ZBTB7AO95365 584 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 ANP32DO95626 131 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 IFNA8P32881 189 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 TTLL4Q14679 1199 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 ZNF668Q96K58 619 aaPredicted RBP12.58□□□□□ -0.4
SHPRH-211ENST00000629427 TEKT2Q9UIF3 430 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 USP17L5A8MUK1 530 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 PRELPP51888 382 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 CYP27A1Q02318 531 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 MFSD14CQ5VZR4 134 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 CRLF3Q8IUI8 442 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 NCLNQ969V3 563 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 TRAIPQ9BWF2 469 aa12.58□□□□□ -0.4
SHPRH-211ENST00000629427 PI4K2BG5E9Z4 385 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 C11orf57Q6ZUT1 292 aaPredicted RBP12.57□□□□□ -0.4
SHPRH-211ENST00000629427 GIPC2Q8TF65 315 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 FAM213AQ9BRX8 229 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 NDST4Q9H3R1 872 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 ZNF302Q9NR11 478 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 FAM95CA0A1B0GW59 222 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 NRBF2Q96F24 287 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 POLR3CQ9BUI4 534 aaPredicted RBP12.57□□□□□ -0.4
SHPRH-211ENST00000629427 TRIM15Q9C019 465 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 SASH1O94885 1247 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 FAM167AQ96KS9 214 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 RNF123Q5XPI4 1314 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 GOLGA8MH3BSY2 632 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 HSPA4LO95757 839 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 AIFM3Q96NN9 605 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 PIH1D3Q9NQM4 214 aaKnown RBP12.57□□□□□ -0.4
SHPRH-211ENST00000629427 ADAM22Q9P0K1 906 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 SEC31AO94979 1220 aaKnown RBP12.57□□□□□ -0.4
SHPRH-211ENST00000629427 RWDD2BP57060 319 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 SYNE4Q8N205 404 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 HADHAP40939 763 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 AP1B1Q10567 949 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 HSP90AA5PQ58FG0 334 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 KRT80Q6KB66 452 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 CEP19Q96LK0 163 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 ASNSD1Q9NWL6 643 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 RNF181Q9P0P0 153 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 UBE4BO95155 1302 aa12.57□□□□□ -0.4
SHPRH-211ENST00000629427 IKBKBO14920 756 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 PYGLP06737 847 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 FCER1AP12319 257 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 LINC00301Q8NCQ3 95 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 UPF3AQ9H1J1 476 aaKnown RBP12.56□□□□□ -0.4
SHPRH-211ENST00000629427 TMCC1O94876 653 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 NDUFA10O95299 355 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 OCM2P0CE71 109 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 OCMP0CE72 109 aaPredicted RBP12.56□□□□□ -0.4
SHPRH-211ENST00000629427 CCNE1P24864 410 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 SH3BGRP55822 239 aaPredicted RBP12.56□□□□□ -0.4
SHPRH-211ENST00000629427 PTK2BQ14289 1009 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 HLFQ16534 295 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 NEUROG2Q9H2A3 272 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 SH3GLB2Q9NR46 395 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 MYO3BQ8WXR4 1341 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 IFNAR1P17181 557 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 MCPH1Q8NEM0 835 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 OTUD5Q96G74 571 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 RASGRF2O14827 1237 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 ZBTB5O15062 677 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 ESRRAP11474 423 aaPredicted RBP12.56□□□□□ -0.4
SHPRH-211ENST00000629427 VCPP55072 806 aaKnown RBP12.56□□□□□ -0.4
SHPRH-211ENST00000629427 TMEM270Q6UE05 265 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 SPATA33Q96N06 139 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 EDEM3Q9BZQ6 932 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 SP110Q9HB58 689 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 SUN2Q9UH99 717 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 CEP170Q5SW79 1584 aa12.56□□□□□ -0.4
SHPRH-211ENST00000629427 ATICP31939 592 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms