RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.74■□□□□ 0.59
UBE3D-208ENST00000626828 CEP170P1Q96L14 293 aa18.74■□□□□ 0.59
UBE3D-208ENST00000626828 RAD9AQ99638 391 aa18.74■□□□□ 0.59
UBE3D-208ENST00000626828 FTHL17Q9BXU8 183 aa18.74■□□□□ 0.59
UBE3D-208ENST00000626828 NKX2-4Q9H2Z4 354 aa18.74■□□□□ 0.59
UBE3D-208ENST00000626828 CDHR5Q9HBB8 845 aa18.74■□□□□ 0.59
UBE3D-208ENST00000626828 CYP26B1Q9NR63 512 aa18.74■□□□□ 0.59
UBE3D-208ENST00000626828 PADI3Q9ULW8 664 aa18.74■□□□□ 0.59
UBE3D-208ENST00000626828 YBX2Q9Y2T7 364 aaKnown RBP18.74■□□□□ 0.59
UBE3D-208ENST00000626828 PCDHB6Q9Y5E3 794 aa18.74■□□□□ 0.59
UBE3D-208ENST00000626828 MICAL3Q7RTP6 2002 aa18.73■□□□□ 0.59
UBE3D-208ENST00000626828 TMEM150BA6NC51 233 aa18.73■□□□□ 0.59
UBE3D-208ENST00000626828 LAD1O00515 517 aa18.73■□□□□ 0.59
UBE3D-208ENST00000626828 TLL1O43897 1013 aa18.73■□□□□ 0.59
UBE3D-208ENST00000626828 GPR32O75388 356 aa18.73■□□□□ 0.59
UBE3D-208ENST00000626828 GJB5O95377 273 aa18.73■□□□□ 0.59
UBE3D-208ENST00000626828 VTNP04004 478 aa18.73■□□□□ 0.59
UBE3D-208ENST00000626828 CD52P31358 61 aa18.73■□□□□ 0.59
UBE3D-208ENST00000626828 YWHABP31946 246 aaKnown RBP18.73■□□□□ 0.59
UBE3D-208ENST00000626828 NPEPPSP55786 919 aa18.73■□□□□ 0.59
UBE3D-208ENST00000626828 NLRP11P59045 1033 aaKnown RBP18.73■□□□□ 0.59
UBE3D-208ENST00000626828 CYP4A11Q02928 519 aa18.73■□□□□ 0.59
UBE3D-208ENST00000626828 PTGDRQ13258 359 aa18.73■□□□□ 0.59
UBE3D-208ENST00000626828 KIZQ2M2Z5 673 aa18.73■□□□□ 0.59
UBE3D-208ENST00000626828 TMEM266Q2M3C6 531 aa18.73■□□□□ 0.59
UBE3D-208ENST00000626828 LRRC71Q8N4P6 559 aa18.73■□□□□ 0.59
UBE3D-208ENST00000626828 ERMNQ8TAM6 284 aa18.73■□□□□ 0.59
UBE3D-208ENST00000626828 TOP1MTQ969P6 601 aa18.73■□□□□ 0.59
UBE3D-208ENST00000626828 SH2D3AQ9BRG2 576 aa18.73■□□□□ 0.59
UBE3D-208ENST00000626828 WRAP73Q9P2S5 460 aaPredicted RBP18.73■□□□□ 0.59
UBE3D-208ENST00000626828 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.72■□□□□ 0.59
UBE3D-208ENST00000626828 GPR182O15218 404 aa18.72■□□□□ 0.59
UBE3D-208ENST00000626828 RPS6KA5O75582 802 aa18.72■□□□□ 0.59
UBE3D-208ENST00000626828 MYOGP15173 224 aa18.72■□□□□ 0.59
UBE3D-208ENST00000626828 RFC5P40937 340 aa18.72■□□□□ 0.59
UBE3D-208ENST00000626828 PAK2Q13177 524 aa18.72■□□□□ 0.59
UBE3D-208ENST00000626828 NBR1Q14596 966 aa18.72■□□□□ 0.59
UBE3D-208ENST00000626828 XKR9Q5GH70 373 aa18.72■□□□□ 0.59
UBE3D-208ENST00000626828 MYOCDQ8IZQ8 938 aa18.72■□□□□ 0.59
UBE3D-208ENST00000626828 SLC7A3Q8WY07 619 aa18.72■□□□□ 0.59
UBE3D-208ENST00000626828 POLR3CQ9BUI4 534 aaPredicted RBP18.72■□□□□ 0.59
UBE3D-208ENST00000626828 ADAMTS10Q9H324 1103 aa18.72■□□□□ 0.59
UBE3D-208ENST00000626828 TUFT1Q9NNX1 390 aa18.72■□□□□ 0.59
UBE3D-208ENST00000626828 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.72■□□□□ 0.59
UBE3D-208ENST00000626828 ANKEF1Q9NU02 776 aa18.72■□□□□ 0.59
UBE3D-208ENST00000626828 NOC2LQ9Y3T9 749 aaKnown RBP18.72■□□□□ 0.59
UBE3D-208ENST00000626828 INSL6Q9Y581 213 aa18.72■□□□□ 0.59
UBE3D-208ENST00000626828 STK24Q9Y6E0 443 aa18.72■□□□□ 0.59
UBE3D-208ENST00000626828 GBF1Q92538 1859 aa18.71■□□□□ 0.59
UBE3D-208ENST00000626828 TTC3P53804 2025 aa18.71■□□□□ 0.59
UBE3D-208ENST00000626828 POTEMA6NI47 508 aa18.71■□□□□ 0.59
UBE3D-208ENST00000626828 FXR2P51116 673 aaKnown RBP eCLIP18.71■□□□□ 0.59
UBE3D-208ENST00000626828 NFX1Q12986 1120 aaKnown RBP18.71■□□□□ 0.59
UBE3D-208ENST00000626828 PLA2G4FQ68DD2 849 aa18.71■□□□□ 0.59
UBE3D-208ENST00000626828 CDX2Q99626 313 aaPredicted RBP18.71■□□□□ 0.59
UBE3D-208ENST00000626828 RAB34Q9BZG1 259 aa18.71■□□□□ 0.59
UBE3D-208ENST00000626828 SUCLA2Q9P2R7 463 aaPredicted RBP18.71■□□□□ 0.59
UBE3D-208ENST00000626828 ZBTB39O15060 712 aa18.7■□□□□ 0.58
UBE3D-208ENST00000626828 CA3P07451 260 aa18.7■□□□□ 0.58
UBE3D-208ENST00000626828 SPATA31C1P0DKV0 1188 aa18.7■□□□□ 0.58
UBE3D-208ENST00000626828 EIF4BP23588 611 aaKnown RBP18.7■□□□□ 0.58
UBE3D-208ENST00000626828 PRPHP41219 470 aa18.7■□□□□ 0.58
UBE3D-208ENST00000626828 GPC3P51654 580 aa18.7■□□□□ 0.58
UBE3D-208ENST00000626828 POLGP54098 1239 aaPredicted RBP18.7■□□□□ 0.58
UBE3D-208ENST00000626828 GRIN2CQ14957 1233 aa18.7■□□□□ 0.58
UBE3D-208ENST00000626828 PPP2R2DQ66LE6 453 aa18.7■□□□□ 0.58
UBE3D-208ENST00000626828 FAM117BQ6P1L5 589 aa18.7■□□□□ 0.58
UBE3D-208ENST00000626828 BRAPQ7Z569 592 aa18.7■□□□□ 0.58
UBE3D-208ENST00000626828 TMCO2Q7Z6W1 182 aaPredicted RBP18.7■□□□□ 0.58
UBE3D-208ENST00000626828 RTN4RL1Q86UN2 441 aaPredicted RBP18.7■□□□□ 0.58
UBE3D-208ENST00000626828 CATSPER3Q86XQ3 398 aa18.7■□□□□ 0.58
UBE3D-208ENST00000626828 ZNF579Q8NAF0 562 aaKnown RBP18.7■□□□□ 0.58
UBE3D-208ENST00000626828 GUCD1Q96NT3 240 aa18.7■□□□□ 0.58
UBE3D-208ENST00000626828 NACC1Q96RE7 527 aa18.7■□□□□ 0.58
UBE3D-208ENST00000626828 OSMRQ99650 979 aa18.7■□□□□ 0.58
UBE3D-208ENST00000626828 DHX33Q9H6R0 707 aaKnown RBP18.7■□□□□ 0.58
UBE3D-208ENST00000626828 ERVK-5Q9HDB9 667 aa18.7■□□□□ 0.58
UBE3D-208ENST00000626828 LRWD1Q9UFC0 647 aa18.7■□□□□ 0.58
UBE3D-208ENST00000626828 ST3GAL5Q9UNP4 418 aa18.7■□□□□ 0.58
UBE3D-208ENST00000626828 RBAK-RBAKDNI3L0D1 243 aa18.69■□□□□ 0.58
UBE3D-208ENST00000626828 ASAP2O43150 1006 aa18.69■□□□□ 0.58
UBE3D-208ENST00000626828 GAS2O43903 313 aaKnown RBP18.69■□□□□ 0.58
UBE3D-208ENST00000626828 UPP2O95045 317 aa18.69■□□□□ 0.58
UBE3D-208ENST00000626828 MUTP22033 750 aa18.69■□□□□ 0.58
UBE3D-208ENST00000626828 RPA1P27694 616 aa18.69■□□□□ 0.58
UBE3D-208ENST00000626828 DTHD1Q6ZMT9 781 aa18.69■□□□□ 0.58
UBE3D-208ENST00000626828 HSCBQ8IWL3 235 aa18.69■□□□□ 0.58
UBE3D-208ENST00000626828 TMEM40Q8WWA1 233 aa18.69■□□□□ 0.58
UBE3D-208ENST00000626828 TCP11Q8WWU5 503 aa18.69■□□□□ 0.58
UBE3D-208ENST00000626828 PPP1R16BQ96T49 567 aa18.69■□□□□ 0.58
UBE3D-208ENST00000626828 GCOM2Q9BZD3 368 aaPredicted RBP18.69■□□□□ 0.58
UBE3D-208ENST00000626828 INO80BQ9C086 356 aaPredicted RBP18.69■□□□□ 0.58
UBE3D-208ENST00000626828 STXBP5LQ9Y2K9 1186 aa18.69■□□□□ 0.58
UBE3D-208ENST00000626828 SIP14410 1827 aa18.69■□□□□ 0.58
UBE3D-208ENST00000626828 VPS37CA5D8V6 355 aaPredicted RBP18.68■□□□□ 0.58
UBE3D-208ENST00000626828 SYT1P21579 422 aa18.68■□□□□ 0.58
UBE3D-208ENST00000626828 HTRA4P83105 476 aaPredicted RBP18.68■□□□□ 0.58
UBE3D-208ENST00000626828 DRP2Q13474 957 aa18.68■□□□□ 0.58
UBE3D-208ENST00000626828 ZNF410Q86VK4 478 aa18.68■□□□□ 0.58
UBE3D-208ENST00000626828 NLRP7Q8WX94 980 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms