RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 SP3Q02447 781 aa13.02□□□□□ -0.33
LINC00963-220ENST00000625171 SPAG1Q07617 926 aa13.02□□□□□ -0.33
LINC00963-220ENST00000625171 EDRF1Q3B7T1 1238 aa13.02□□□□□ -0.33
LINC00963-220ENST00000625171 ZCWPW2Q504Y3 356 aa13.02□□□□□ -0.33
LINC00963-220ENST00000625171 XKR9Q5GH70 373 aa13.02□□□□□ -0.33
LINC00963-220ENST00000625171 STXBP4Q6ZWJ1 553 aa13.02□□□□□ -0.33
LINC00963-220ENST00000625171 ZNF720Q7Z2F6 126 aa13.02□□□□□ -0.33
LINC00963-220ENST00000625171 ZC3H3Q8IXZ2 948 aaKnown RBP13.02□□□□□ -0.33
LINC00963-220ENST00000625171 CD99L2Q8TCZ2 262 aa13.02□□□□□ -0.33
LINC00963-220ENST00000625171 SPIRE2Q8WWL2 714 aa13.02□□□□□ -0.33
LINC00963-220ENST00000625171 NELFBQ8WX92 580 aa13.02□□□□□ -0.33
LINC00963-220ENST00000625171 KIFAP3Q92845 792 aa13.02□□□□□ -0.33
LINC00963-220ENST00000625171 SPATA33Q96N06 139 aa13.02□□□□□ -0.33
LINC00963-220ENST00000625171 TMEM106CQ9BVX2 250 aa13.02□□□□□ -0.33
LINC00963-220ENST00000625171 THAP9Q9H5L6 903 aa13.02□□□□□ -0.33
LINC00963-220ENST00000625171 SLC39A2Q9NP94 309 aa13.02□□□□□ -0.33
LINC00963-220ENST00000625171 GNEQ9Y223 722 aaKnown RBP13.02□□□□□ -0.33
LINC00963-220ENST00000625171 CEP290O15078 2479 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 A6NJR5 290 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 NOP56O00567 594 aaKnown RBP13.01□□□□□ -0.33
LINC00963-220ENST00000625171 PDXKO00764 312 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 AP5Z1O43299 807 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 PPP1R37O75864 691 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 FAM13AO94988 1023 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 FGFR1OPO95684 399 aaKnown RBP13.01□□□□□ -0.33
LINC00963-220ENST00000625171 PLS3P13797 630 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 EN2P19622 333 aaPredicted RBP13.01□□□□□ -0.33
LINC00963-220ENST00000625171 HOXD10P28358 340 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 PSMC4P43686 418 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 MYBPC2Q14324 1141 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 KIF22Q14807 665 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 SMYD4Q8IYR2 804 aaPredicted RBP13.01□□□□□ -0.33
LINC00963-220ENST00000625171 ATP8B4Q8TF62 1192 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 SCFD1Q8WVM8 642 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 HVCN1Q96D96 273 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 ZNF333Q96JL9 665 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 TRIM47Q96LD4 638 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 CTAGE1Q96RT6 745 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 DUSP9Q99956 384 aaKnown RBP13.01□□□□□ -0.33
LINC00963-220ENST00000625171 KCTD10Q9H3F6 313 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 CGNQ9P2M7 1197 aaKnown RBP13.01□□□□□ -0.33
LINC00963-220ENST00000625171 TELO2Q9Y4R8 837 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 PCDHB13Q9Y5F0 798 aa13.01□□□□□ -0.33
LINC00963-220ENST00000625171 SYNRGQ9UMZ2 1314 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 IGKV6-21A0A0C4DH24 114 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 NPHP3-ACAD11A0A0J9YXS1 232 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 HBP1O60381 514 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 HIP1RO75146 1068 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 ADCY5O95622 1261 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 SMPD1P17405 629 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 EEF1GP26641 437 aaKnown RBP13□□□□□ -0.33
LINC00963-220ENST00000625171 ADCYAP1R1P41586 468 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 ZNF75DP51815 510 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 PRMT2P55345 433 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 MCCD1P59942 119 aaPredicted RBP13□□□□□ -0.33
LINC00963-220ENST00000625171 GTF2BQ00403 316 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 KNOP1Q1ED39 458 aaKnown RBP13□□□□□ -0.33
LINC00963-220ENST00000625171 CCDC144BQ3MJ40 725 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 HS1BP3Q53T59 392 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 SFR1Q86XK3 245 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 CEP170P1Q96L14 293 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 JPH2Q9BR39 696 aaPredicted RBP13□□□□□ -0.33
LINC00963-220ENST00000625171 SEMA6BQ9H3T3 888 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 ERAP1Q9NZ08 941 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 FLRT1Q9NZU1 646 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 LIMA1Q9UHB6 759 aaKnown RBP13□□□□□ -0.33
LINC00963-220ENST00000625171 FAM184BQ9ULE4 1060 aa13□□□□□ -0.33
LINC00963-220ENST00000625171 COL1A2P08123 1366 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 RSPH10B2B2RC85 870 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 H0YCG3 227 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 CBFA2T2O43439 604 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 MAFO75444 373 aaPredicted RBP12.99□□□□□ -0.33
LINC00963-220ENST00000625171 RSPH10BP0C881 870 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 NCKAP1LP55160 1127 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 NPEPPSP55786 919 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 MARSP56192 900 aaKnown RBP12.99□□□□□ -0.33
LINC00963-220ENST00000625171 FANCCQ00597 558 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 FKBP3Q00688 224 aaKnown RBP12.99□□□□□ -0.33
LINC00963-220ENST00000625171 TNFAIP2Q03169 654 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 POU5F1BQ06416 359 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 ODR4Q5SWX8 454 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 UTP14CQ5TAP6 766 aaKnown RBP12.99□□□□□ -0.33
LINC00963-220ENST00000625171 ANKRD40Q6AI12 368 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 APTXQ7Z2E3 356 aaKnown RBP12.99□□□□□ -0.33
LINC00963-220ENST00000625171 IRF2BP1Q8IU81 584 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 FAM114A1Q8IWE2 563 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 MYCT1Q8N699 235 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 CEP63Q96MT8 703 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 CCDC43Q96MW1 224 aaKnown RBP12.99□□□□□ -0.33
LINC00963-220ENST00000625171 C16orf70Q9BSU1 422 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 TRIM5Q9C035 493 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 MRPL44Q9H9J2 332 aaKnown RBP12.99□□□□□ -0.33
LINC00963-220ENST00000625171 ATP6V0A4Q9HBG4 840 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 CTNND2Q9UQB3 1225 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 COLQQ9Y215 455 aaPredicted RBP12.99□□□□□ -0.33
LINC00963-220ENST00000625171 DOCK3Q8IZD9 2030 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 WDR81Q562E7 1941 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 SZT2Q5T011 3432 aa12.99□□□□□ -0.33
LINC00963-220ENST00000625171 MCM3APO60318 1980 aa12.98□□□□□ -0.33
LINC00963-220ENST00000625171 KPNA6O60684 536 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms