RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 ZNF211Q13398 564 aaPredicted RBP12.72□□□□□ -0.37
ATRX-214ENST00000624166 EDRF1Q3B7T1 1238 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 ANKRD20A8PQ5CZ79 823 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 CAPN12Q6ZSI9 719 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 SRRM1Q8IYB3 904 aaKnown RBP12.72□□□□□ -0.37
ATRX-214ENST00000624166 RPUSD2Q8IZ73 545 aaKnown RBP12.72□□□□□ -0.37
ATRX-214ENST00000624166 ACTRT1Q8TDG2 376 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 KCNV2Q8TDN2 545 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 RSAD2Q8WXG1 361 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 PIGBQ92521 554 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 AMNQ9BXJ7 453 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 WNT8AQ9H1J5 351 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 GDF3Q9NR23 364 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 C1orf112Q9NSG2 853 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 DDX20Q9UHI6 824 aaKnown RBP12.72□□□□□ -0.37
ATRX-214ENST00000624166 AGLP35573 1532 aa12.72□□□□□ -0.37
ATRX-214ENST00000624166 ESRRAP11474 423 aaPredicted RBP12.71□□□□□ -0.37
ATRX-214ENST00000624166 PREPLQ4J6C6 727 aaPredicted RBP12.71□□□□□ -0.37
ATRX-214ENST00000624166 MFSD14BQ5SR56 506 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 COL23A1Q86Y22 540 aaPredicted RBP12.71□□□□□ -0.37
ATRX-214ENST00000624166 RAB3IL1Q8TBN0 382 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 NUDCD1Q96RS6 583 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 OSBPL1AQ9BXW6 950 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 UBXN6Q9BZV1 441 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 EHD4Q9H223 541 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.71□□□□□ -0.37
ATRX-214ENST00000624166 H0Y3Z8 333 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 PJA2O43164 708 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 SHOX2O60902 331 aaPredicted RBP12.71□□□□□ -0.37
ATRX-214ENST00000624166 UCHL3P15374 230 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 PTK2Q05397 1052 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 LRRC14Q15048 493 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 GNPTABQ3T906 1256 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 CENPPQ6IPU0 288 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 PPP1R2P3Q6NXS1 205 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 SLC30A9Q6PML9 568 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 APLFQ8IW19 511 aaPredicted RBP12.71□□□□□ -0.37
ATRX-214ENST00000624166 TSEN2Q8NCE0 465 aaKnown RBP12.71□□□□□ -0.37
ATRX-214ENST00000624166 TRIM51Q9BSJ1 452 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 PPP1R9AQ9ULJ8 1098 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 LEMD3Q9Y2U8 911 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 DIP2AQ14689 1571 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 DIP2BQ9P265 1576 aa12.71□□□□□ -0.37
ATRX-214ENST00000624166 A0A087X0B3 334 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 E9PMD0 336 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 PDE2AO00408 941 aaPredicted RBP12.71□□□□□ -0.38
ATRX-214ENST00000624166 CFBP00751 764 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 ATF7P17544 494 aaPredicted RBP12.71□□□□□ -0.38
ATRX-214ENST00000624166 CDK8P49336 464 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 KLHDC7AQ5VTJ3 777 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 RNF207Q6ZRF8 634 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 CTAGE3PQ8IX95 158 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 ARHGAP18Q8N392 663 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 MREGQ8N565 214 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 CCDC17Q96LX7 622 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 TLR10Q9BXR5 811 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 HSD3B7Q9H2F3 369 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 PABPC3Q9H361 631 aaKnown RBP12.71□□□□□ -0.38
ATRX-214ENST00000624166 TMEM206Q9H813 350 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 KCNG1Q9UIX4 513 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 DDR1Q08345 913 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 SBK1Q52WX2 424 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 TTMPQ5BVD1 217 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 MEI1Q5TIA1 1274 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 CNBD1Q8NA66 436 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 DAGLBQ8NCG7 672 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 ZKSCAN4Q969J2 545 aaPredicted RBP12.71□□□□□ -0.38
ATRX-214ENST00000624166 FGFR1OP2Q9NVK5 253 aa12.71□□□□□ -0.38
ATRX-214ENST00000624166 CES2O00748 559 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 PDXKO00764 312 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 NOL3O60936 208 aaKnown RBP12.7□□□□□ -0.38
ATRX-214ENST00000624166 PHF2O75151 1096 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 ZWINTO95229 277 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 SOX5P35711 763 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 MRPS35P82673 323 aaKnown RBP12.7□□□□□ -0.38
ATRX-214ENST00000624166 DRAP1Q14919 205 aaPredicted RBP12.7□□□□□ -0.38
ATRX-214ENST00000624166 SEC23AQ15436 765 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 CCDC14Q49A88 953 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 SFR1Q86XK3 245 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 GLYCTKQ8IVS8 523 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 FUKQ8N0W3 1084 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 ATP2A3Q93084 1043 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 RBM17Q96I25 401 aaKnown RBP12.7□□□□□ -0.38
ATRX-214ENST00000624166 TTC25Q96NG3 672 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 CENPKQ9BS16 269 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 FAM129AQ9BZQ8 928 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 PITPNM2Q9BZ72 1349 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 GYG2O15488 501 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 PDHA1P08559 390 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 MSH2P43246 934 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 GALCP54803 685 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 UBE2SQ16763 222 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 RCSD1Q6JBY9 416 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 NACC1Q96RE7 527 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 TRIM55Q9BYV6 548 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 CARD9Q9H257 536 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 ZFP69BQ9UJL9 534 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 A0A087X0T9 212 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 MEIS1O00470 390 aa12.7□□□□□ -0.38
ATRX-214ENST00000624166 ECM2O94769 699 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms