RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 C1orf210Q8IVY1 113 aa8.34□□□□□ -1.07
LINC00963-218ENST00000624138 SLC39A11Q8N1S5 342 aa8.34□□□□□ -1.07
LINC00963-218ENST00000624138 FEZF2Q8TBJ5 459 aa8.34□□□□□ -1.07
LINC00963-218ENST00000624138 OTUD7AQ8TE49 926 aaPredicted RBP8.34□□□□□ -1.07
LINC00963-218ENST00000624138 GLG1Q92896 1179 aa8.34□□□□□ -1.07
LINC00963-218ENST00000624138 TNPO1Q92973 898 aaKnown RBP8.34□□□□□ -1.07
LINC00963-218ENST00000624138 EVI5LQ96CN4 794 aa8.34□□□□□ -1.07
LINC00963-218ENST00000624138 GPRASP2Q96D09 838 aa8.34□□□□□ -1.07
LINC00963-218ENST00000624138 FAM227BQ96M60 508 aa8.34□□□□□ -1.07
LINC00963-218ENST00000624138 ZNF558Q96NG5 402 aa8.34□□□□□ -1.07
LINC00963-218ENST00000624138 PCYT2Q99447 389 aa8.34□□□□□ -1.07
LINC00963-218ENST00000624138 CDHR5Q9HBB8 845 aa8.34□□□□□ -1.07
LINC00963-218ENST00000624138 ZSWIM5Q9P217 1185 aa8.34□□□□□ -1.07
LINC00963-218ENST00000624138 ST3GAL5Q9UNP4 418 aa8.34□□□□□ -1.07
LINC00963-218ENST00000624138 TDRD15B5MCY1 1934 aaKnown RBP8.34□□□□□ -1.07
LINC00963-218ENST00000624138 GREB1Q4ZG55 1949 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 PNMA6FA0A0J9YX94 578 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 PRR5-ARHGAP8B1AHC4 643 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 B4E1Z4 1266 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 STK25O00506 426 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 ZNF213O14771 459 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 GPR182O15218 404 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 HOXA2O43364 376 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 NARSO43776 548 aaKnown RBP8.33□□□□□ -1.08
LINC00963-218ENST00000624138 CXCL14O95715 111 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 EPCAMP16422 314 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 MX1P20591 662 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 IBSPP21815 317 aaPredicted RBP8.33□□□□□ -1.08
LINC00963-218ENST00000624138 PBX3P40426 434 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 ARHGAP8P85298 464 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 ZNF528Q3MIS6 628 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 VARS2Q5ST30 1063 aaKnown RBP8.33□□□□□ -1.08
LINC00963-218ENST00000624138 MTHFD1LQ6UB35 978 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 MAML2Q8IZL2 1156 aaPredicted RBP8.33□□□□□ -1.08
LINC00963-218ENST00000624138 TRAPPC12Q8WVT3 735 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 TMEM40Q8WWA1 233 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 CDHR1Q96JP9 859 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 PIGSQ96S52 555 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 RTKNQ9BST9 563 aa8.33□□□□□ -1.08
LINC00963-218ENST00000624138 CNOT1A5YKK6 2376 aaKnown RBP8.33□□□□□ -1.08
LINC00963-218ENST00000624138 SPAG17Q6Q759 2223 aa8.32□□□□□ -1.08
LINC00963-218ENST00000624138 PIK3CDO00329 1044 aa8.32□□□□□ -1.08
LINC00963-218ENST00000624138 CYTH3O43739 400 aa8.32□□□□□ -1.08
LINC00963-218ENST00000624138 KINO60870 393 aaKnown RBP8.32□□□□□ -1.08
LINC00963-218ENST00000624138 DCNP07585 359 aaKnown RBP8.32□□□□□ -1.08
LINC00963-218ENST00000624138 CFHP08603 1231 aa8.32□□□□□ -1.08
LINC00963-218ENST00000624138 TGM1P22735 817 aa8.32□□□□□ -1.08
LINC00963-218ENST00000624138 GIT2Q14161 759 aa8.32□□□□□ -1.08
LINC00963-218ENST00000624138 BMS1Q14692 1282 aaKnown RBP8.32□□□□□ -1.08
LINC00963-218ENST00000624138 PLCB4Q15147 1175 aa8.32□□□□□ -1.08
LINC00963-218ENST00000624138 SEC23AQ15436 765 aa8.32□□□□□ -1.08
LINC00963-218ENST00000624138 TMC5Q6UXY8 1006 aa8.32□□□□□ -1.08
LINC00963-218ENST00000624138 CCDC149Q6ZUS6 474 aa8.32□□□□□ -1.08
LINC00963-218ENST00000624138 PLPPR4Q7Z2D5 763 aa8.32□□□□□ -1.08
LINC00963-218ENST00000624138 HOMER1Q86YM7 354 aa8.32□□□□□ -1.08
LINC00963-218ENST00000624138 KIAA0319LQ8IZA0 1049 aa8.32□□□□□ -1.08
LINC00963-218ENST00000624138 LRRC43Q8N309 656 aa8.32□□□□□ -1.08
LINC00963-218ENST00000624138 ZBP1Q9H171 429 aa8.32□□□□□ -1.08
LINC00963-218ENST00000624138 TBC1D17Q9HA65 648 aa8.32□□□□□ -1.08
LINC00963-218ENST00000624138 SIT1Q9Y3P8 196 aa8.32□□□□□ -1.08
LINC00963-218ENST00000624138 NOTCH4Q99466 2003 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 DCDC2BA2VCK2 349 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 POTEMA6NI47 508 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 MEIS2O14770 477 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 SPTLC1O15269 473 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 MAFGO15525 162 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 N4BP1O75113 896 aaKnown RBP8.31□□□□□ -1.08
LINC00963-218ENST00000624138 CTSAP10619 480 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 GLULP15104 373 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 ITGB5P18084 799 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 KLRC1P26715 233 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 CRYBB1P53674 252 aaPredicted RBP8.31□□□□□ -1.08
LINC00963-218ENST00000624138 POLGP54098 1239 aaPredicted RBP8.31□□□□□ -1.08
LINC00963-218ENST00000624138 LMNB2Q03252 620 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 NMIQ13287 307 aaPredicted RBP8.31□□□□□ -1.08
LINC00963-218ENST00000624138 COL9A2Q14055 689 aaPredicted RBP8.31□□□□□ -1.08
LINC00963-218ENST00000624138 NONOQ15233 471 aaKnown RBP eCLIP8.31□□□□□ -1.084e-7■□□□□ 8.3
LINC00963-218ENST00000624138 LETM2Q2VYF4 491 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 IFIT1BQ5T764 474 aaKnown RBP8.31□□□□□ -1.08
LINC00963-218ENST00000624138 POTEGQ6S5H5 508 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 C15orf39Q6ZRI6 1047 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 CABP7Q86V35 215 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 FAM228AQ86W67 206 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 PPFIBP1Q86W92 1011 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 VPS52Q8N1B4 723 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 SLC44A3Q8N4M1 653 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 NXPE3Q969Y0 559 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 SFXN1Q9H9B4 322 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 NCDNQ9UBB6 729 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 CDV3Q9UKY7 258 aaKnown RBP8.31□□□□□ -1.08
LINC00963-218ENST00000624138 CA14Q9ULX7 337 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 UBIAD1Q9Y5Z9 338 aa8.31□□□□□ -1.08
LINC00963-218ENST00000624138 PDCD11Q14690 1871 aaKnown RBP8.3□□□□□ -1.08
LINC00963-218ENST00000624138 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.3□□□□□ -1.08
LINC00963-218ENST00000624138 NT5C1B-RDH14C9J2C7 533 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 ATG7O95352 703 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 SRFP11831 508 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 STAT5BP51692 787 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 BCAR1P56945 870 aa8.3□□□□□ -1.08
LINC00963-218ENST00000624138 GRM4Q14833 912 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms