RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 DAAM1Q9Y4D1 1078 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 KIF13BQ9NQT8 1826 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 RARAP10276 462 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 RASA1P20936 1047 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 ANXA13P27216 316 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 IFNAR2P48551 515 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 PLTPP55058 493 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 ITPK1Q13572 414 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 HERC4Q5GLZ8 1057 aaPredicted RBP15.31■□□□□ 0.04
LDB3-209ENST00000623056 DCAF12L1Q5VU92 463 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 ADAT2Q7Z6V5 191 aaKnown RBP15.31■□□□□ 0.04
LDB3-209ENST00000623056 DHX37Q8IY37 1157 aaKnown RBP15.31■□□□□ 0.04
LDB3-209ENST00000623056 ZNF570Q96NI8 536 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 NSRP1Q9H0G5 558 aaKnown RBP15.31■□□□□ 0.04
LDB3-209ENST00000623056 AJAP1Q9UKB5 411 aaPredicted RBP15.31■□□□□ 0.04
LDB3-209ENST00000623056 LOC102724428A0A0B4J2F2 783 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 DDX3XO00571 662 aaKnown RBP eCLIP15.31■□□□□ 0.04
LDB3-209ENST00000623056 KIF3CO14782 793 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 ALDH5A1P51649 535 aaPredicted RBP15.31■□□□□ 0.04
LDB3-209ENST00000623056 SIK1P57059 783 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 SLC29A2Q14542 456 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 EXOC3L4Q17RC7 722 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 ZDHHC24Q6UX98 284 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 VPS36Q86VN1 386 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 SH3RF3Q8TEJ3 882 aaPredicted RBP15.31■□□□□ 0.04
LDB3-209ENST00000623056 U2AF1L4Q8WU68 220 aaKnown RBP15.31■□□□□ 0.04
LDB3-209ENST00000623056 GLG1Q92896 1179 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 GJA10Q969M2 543 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 SPDL1Q96EA4 605 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 ERVK-5Q9HDB9 667 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 INTUQ9ULD6 942 aa15.31■□□□□ 0.04
LDB3-209ENST00000623056 DDX3YO15523 660 aaKnown RBP15.3■□□□□ 0.04
LDB3-209ENST00000623056 AGTP01019 485 aa15.3■□□□□ 0.04
LDB3-209ENST00000623056 AFPP02771 609 aaKnown RBP15.3■□□□□ 0.04
LDB3-209ENST00000623056 NR2F2P24468 414 aa15.3■□□□□ 0.04
LDB3-209ENST00000623056 CRKLP46109 303 aaKnown RBP15.3■□□□□ 0.04
LDB3-209ENST00000623056 KCNQ4P56696 695 aa15.3■□□□□ 0.04
LDB3-209ENST00000623056 PRPF4BQ13523 1007 aaKnown RBP15.3■□□□□ 0.04
LDB3-209ENST00000623056 EDRF1Q3B7T1 1238 aa15.3■□□□□ 0.04
LDB3-209ENST00000623056 UBAP2Q5T6F2 1119 aaKnown RBP15.3■□□□□ 0.04
LDB3-209ENST00000623056 COL23A1Q86Y22 540 aaPredicted RBP15.3■□□□□ 0.04
LDB3-209ENST00000623056 DZIP1Q86YF9 867 aaKnown RBP15.3■□□□□ 0.04
LDB3-209ENST00000623056 ECT2Q9H8V3 914 aa15.3■□□□□ 0.04
LDB3-209ENST00000623056 OSGEPQ9NPF4 335 aa15.3■□□□□ 0.04
LDB3-209ENST00000623056 CCDC87Q9NVE4 849 aa15.3■□□□□ 0.04
LDB3-209ENST00000623056 GGT7Q9UJ14 662 aa15.3■□□□□ 0.04
LDB3-209ENST00000623056 PPP1R9AQ9ULJ8 1098 aa15.3■□□□□ 0.04
LDB3-209ENST00000623056 SNX24Q9Y343 169 aa15.3■□□□□ 0.04
LDB3-209ENST00000623056 CD2APQ9Y5K6 639 aa15.3■□□□□ 0.04
LDB3-209ENST00000623056 MAST2Q6P0Q8 1798 aa15.3■□□□□ 0.04
LDB3-209ENST00000623056 RPTORQ8N122 1335 aa15.3■□□□□ 0.04
LDB3-209ENST00000623056 FAM187AA6NFU0 413 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 E9PMD0 336 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 SNX3O60493 162 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 DIAPH2O60879 1101 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 HIBADHP31937 336 aaKnown RBP15.29■□□□□ 0.04
LDB3-209ENST00000623056 GCKP35557 465 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 GALCP54803 685 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 SLMAPQ14BN4 828 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 C6orf118Q5T5N4 469 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 PTF1AQ7RTS3 328 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 JAMLQ86YT9 394 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 FBXO25Q8TCJ0 367 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 UBA5Q9GZZ9 404 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 ARMCX3Q9UH62 379 aaPredicted RBP15.29■□□□□ 0.04
LDB3-209ENST00000623056 IGF2BP3O00425 579 aaKnown RBP eCLIP15.29■□□□□ 0.04
LDB3-209ENST00000623056 KIAA0391O15091 583 aaKnown RBP15.29■□□□□ 0.04
LDB3-209ENST00000623056 OAS1P00973 400 aaKnown RBP15.29■□□□□ 0.04
LDB3-209ENST00000623056 ADCY7P51828 1080 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 JAM2P57087 298 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 ADCY2Q08462 1091 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 KIAA1755Q5JYT7 1200 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 FAM182BQ5T319 152 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 PPP4R3CPQ6ZMV5 832 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 EPS8L3Q8TE67 593 aaKnown RBP15.29■□□□□ 0.04
LDB3-209ENST00000623056 PRCCQ92733 491 aaPredicted RBP15.29■□□□□ 0.04
LDB3-209ENST00000623056 CELF1Q92879 486 aaKnown RBP15.29■□□□□ 0.04
LDB3-209ENST00000623056 COA7Q96BR5 231 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 SEMA4AQ9H3S1 761 aa15.29■□□□□ 0.04
LDB3-209ENST00000623056 GOLGA6L10A0A0M3HER8 536 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 CCND1P24385 295 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 CALRP27797 417 aaKnown RBP15.28■□□□□ 0.04
LDB3-209ENST00000623056 CDC25CP30307 473 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 EPHA7Q15375 998 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 CNGA2Q16280 664 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 PPP2R5EQ16537 467 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 C11orf91Q3C1V1 193 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 GALNTL6Q49A17 601 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 FRMD5Q7Z6J6 570 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 GPBP1Q86WP2 473 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 UHMK1Q8TAS1 419 aaKnown RBP15.28■□□□□ 0.04
LDB3-209ENST00000623056 HAS1Q92839 578 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 SIX2Q9NPC8 291 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 PLA2G4BP0C869 781 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 SMARCA1P28370 1054 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 SLCO1A2P46721 670 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 TNNI2P48788 182 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 DHX34Q14147 1143 aaKnown RBP15.28■□□□□ 0.04
LDB3-209ENST00000623056 VPS72Q15906 364 aa15.28■□□□□ 0.04
LDB3-209ENST00000623056 ERFEQ4G0M1 354 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms