RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 TRIM43BA6NCK2 446 aa22.08■■□□□ 1.12
PDLIM2-221ENST00000622702 B4GALT4O60513 344 aa22.08■■□□□ 1.12
PDLIM2-221ENST00000622702 KINO60870 393 aaKnown RBP22.08■■□□□ 1.12
PDLIM2-221ENST00000622702 SMIM10L2AP0DMW4 78 aa22.08■■□□□ 1.12
PDLIM2-221ENST00000622702 SMIM10L2BP0DMW5 78 aa22.08■■□□□ 1.12
PDLIM2-221ENST00000622702 PTPN11Q06124 597 aaPredicted RBP22.08■■□□□ 1.12
PDLIM2-221ENST00000622702 PPFIA1Q13136 1202 aa22.08■■□□□ 1.12
PDLIM2-221ENST00000622702 SV2BQ7L1I2 683 aa22.08■■□□□ 1.12
PDLIM2-221ENST00000622702 CNNM3Q8NE01 707 aa22.08■■□□□ 1.12
PDLIM2-221ENST00000622702 TRIM43Q96BQ3 446 aaPredicted RBP22.08■■□□□ 1.12
PDLIM2-221ENST00000622702 CCDC43Q96MW1 224 aaKnown RBP22.08■■□□□ 1.12
PDLIM2-221ENST00000622702 TRMT13Q9NUP7 481 aaKnown RBP22.08■■□□□ 1.12
PDLIM2-221ENST00000622702 NRCAMQ92823 1304 aa22.08■■□□□ 1.12
PDLIM2-221ENST00000622702 RRN3P2A6NIE6 340 aa22.07■■□□□ 1.12
PDLIM2-221ENST00000622702 HOXC8P31273 242 aa22.07■■□□□ 1.12
PDLIM2-221ENST00000622702 MTERF2Q49AM1 385 aa22.07■■□□□ 1.12
PDLIM2-221ENST00000622702 KANK3Q6NY19 840 aa22.07■■□□□ 1.12
PDLIM2-221ENST00000622702 SESTD1Q86VW0 696 aa22.07■■□□□ 1.12
PDLIM2-221ENST00000622702 MTRQ99707 1265 aa22.07■■□□□ 1.12
PDLIM2-221ENST00000622702 HDAC6Q9UBN7 1215 aa22.07■■□□□ 1.12
PDLIM2-221ENST00000622702 SSBP05455 408 aaKnown RBP eCLIP22.06■■□□□ 1.12
PDLIM2-221ENST00000622702 GRIK4Q16099 956 aa22.06■■□□□ 1.12
PDLIM2-221ENST00000622702 PADI6Q6TGC4 694 aa22.06■■□□□ 1.12
PDLIM2-221ENST00000622702 ELOA2Q8IYF1 753 aaPredicted RBP22.06■■□□□ 1.12
PDLIM2-221ENST00000622702 CCDC34Q96HJ3 373 aa22.06■■□□□ 1.12
PDLIM2-221ENST00000622702 SH2D3AQ9BRG2 576 aa22.06■■□□□ 1.12
PDLIM2-221ENST00000622702 KCND2Q9NZV8 630 aa22.06■■□□□ 1.12
PDLIM2-221ENST00000622702 TBX21Q9UL17 535 aa22.06■■□□□ 1.12
PDLIM2-221ENST00000622702 KAT6AQ92794 2004 aa22.05■■□□□ 1.12
PDLIM2-221ENST00000622702 KIAA0355O15063 1070 aa22.05■■□□□ 1.12
PDLIM2-221ENST00000622702 DGAT1O75907 488 aa22.05■■□□□ 1.12
PDLIM2-221ENST00000622702 CYP11B2P19099 503 aa22.05■■□□□ 1.12
PDLIM2-221ENST00000622702 RFC5P40937 340 aa22.05■■□□□ 1.12
PDLIM2-221ENST00000622702 AMPD3Q01432 767 aa22.05■■□□□ 1.12
PDLIM2-221ENST00000622702 GDF6Q6KF10 455 aaPredicted RBP22.05■■□□□ 1.12
PDLIM2-221ENST00000622702 RINT1Q6NUQ1 792 aa22.05■■□□□ 1.12
PDLIM2-221ENST00000622702 LMBR1Q8WVP7 490 aa22.05■■□□□ 1.12
PDLIM2-221ENST00000622702 PAGE5Q96GU1 130 aa22.05■■□□□ 1.12
PDLIM2-221ENST00000622702 LRRC27Q9C0I9 530 aa22.05■■□□□ 1.12
PDLIM2-221ENST00000622702 DHX33Q9H6R0 707 aaKnown RBP22.05■■□□□ 1.12
PDLIM2-221ENST00000622702 GTF2IRD1Q9UHL9 959 aa22.05■■□□□ 1.12
PDLIM2-221ENST00000622702 ARID2Q68CP9 1835 aa22.05■■□□□ 1.12
PDLIM2-221ENST00000622702 RAG1P15918 1043 aa22.04■■□□□ 1.12
PDLIM2-221ENST00000622702 ADAM17P78536 824 aa22.04■■□□□ 1.12
PDLIM2-221ENST00000622702 DHX8Q14562 1220 aaKnown RBP22.04■■□□□ 1.12
PDLIM2-221ENST00000622702 C1orf186Q6ZWK4 172 aa22.04■■□□□ 1.12
PDLIM2-221ENST00000622702 GPBP1Q86WP2 473 aa22.04■■□□□ 1.12
PDLIM2-221ENST00000622702 EXOC8Q8IYI6 725 aa22.04■■□□□ 1.12
PDLIM2-221ENST00000622702 RUSC1Q9BVN2 902 aa22.04■■□□□ 1.12
PDLIM2-221ENST00000622702 SETD4Q9NVD3 440 aa22.04■■□□□ 1.12
PDLIM2-221ENST00000622702 NOD1Q9Y239 953 aa22.04■■□□□ 1.12
PDLIM2-221ENST00000622702 MBLAC1A4D2B0 266 aaPredicted RBP22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 MAGEB2O15479 319 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 MAFO75444 373 aaPredicted RBP22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 MYL1P05976 194 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 GNAT1P11488 350 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 GUCY2CP25092 1073 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 ITGB8P26012 769 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 MDM2Q00987 491 aaPredicted RBP22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 TBC1D8BQ0IIM8 1120 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 PTGISQ16647 500 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 KLHL40Q2TBA0 621 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 ARSHQ5FYA8 562 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 MARCH8Q5T0T0 291 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 CNNM4Q6P4Q7 775 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 TRAPPC12Q8WVT3 735 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 SLC7A3Q8WY07 619 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 LBHD1Q9BQE6 289 aaPredicted RBP22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 JPH2Q9BR39 696 aaPredicted RBP22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 LTBP2Q14767 1821 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 IGKV6-21A0A0C4DH24 114 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 C17orf102A2RUQ5 167 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 MYMKA6NI61 221 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 USO1O60763 962 aaKnown RBP22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 C22orf31O95567 290 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 CYP2C9P11712 490 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 POLGP54098 1239 aaPredicted RBP22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 IGBP1P78318 339 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 SKOR2Q2VWA4 1001 aaPredicted RBP22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 STAMQ92783 540 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 C7orf25Q9BPX7 421 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 TIPINQ9BVW5 301 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 TRIM9Q9C026 710 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 ATP6V0A4Q9HBG4 840 aa22.03■■□□□ 1.12
PDLIM2-221ENST00000622702 RANBP2P49792 3224 aaKnown RBP22.02■■□□□ 1.12
PDLIM2-221ENST00000622702 GAS2O43903 313 aaKnown RBP22.02■■□□□ 1.12
PDLIM2-221ENST00000622702 TIMP1P01033 207 aa22.02■■□□□ 1.12
PDLIM2-221ENST00000622702 KLRC1P26715 233 aa22.02■■□□□ 1.12
PDLIM2-221ENST00000622702 MAGEA10P43363 369 aaPredicted RBP22.02■■□□□ 1.12
PDLIM2-221ENST00000622702 AFMP43652 599 aa22.02■■□□□ 1.12
PDLIM2-221ENST00000622702 HIC1Q14526 733 aa22.02■■□□□ 1.12
PDLIM2-221ENST00000622702 EMC2Q15006 297 aa22.02■■□□□ 1.12
PDLIM2-221ENST00000622702 MTHFD1LQ6UB35 978 aa22.02■■□□□ 1.12
PDLIM2-221ENST00000622702 GRAMD1CQ8IYS0 662 aa22.02■■□□□ 1.12
PDLIM2-221ENST00000622702 MCPH1Q8NEM0 835 aa22.02■■□□□ 1.12
PDLIM2-221ENST00000622702 BADQ92934 168 aa22.02■■□□□ 1.12
PDLIM2-221ENST00000622702 PPP1R12CQ9BZL4 782 aa22.02■■□□□ 1.12
PDLIM2-221ENST00000622702 CLSTN2Q9H4D0 955 aa22.02■■□□□ 1.12
PDLIM2-221ENST00000622702 XPNPEP1Q9NQW7 623 aa22.02■■□□□ 1.12
PDLIM2-221ENST00000622702 BMP2KQ9NSY1 1161 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms