RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CYFIP2Q96F07 1278 aa13.52□□□□□ -0.25
LITAF-221ENST00000622633 CORO1BQ9BR76 489 aa13.52□□□□□ -0.25
LITAF-221ENST00000622633 LRRC1Q9BTT6 524 aa13.52□□□□□ -0.25
LITAF-221ENST00000622633 NACA2Q9H009 215 aa13.52□□□□□ -0.25
LITAF-221ENST00000622633 EHD2Q9NZN4 543 aa13.52□□□□□ -0.25
LITAF-221ENST00000622633 POLLQ9UGP5 575 aa13.52□□□□□ -0.25
LITAF-221ENST00000622633 BZW2Q9Y6E2 419 aaKnown RBP13.52□□□□□ -0.25
LITAF-221ENST00000622633 MARCH6O60337 910 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 LCA5LO95447 670 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 SLC16A2P36021 539 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 RASSF7Q02833 373 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 ASPRV1Q53RT3 343 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 IQCEQ6IPM2 695 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 KDM7AQ6ZMT4 941 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 GET4Q7L5D6 327 aaPredicted RBP13.51□□□□□ -0.25
LITAF-221ENST00000622633 CACNA2D4Q7Z3S7 1137 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 ADGRF4Q8IZF3 695 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 TSG101Q99816 390 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 JMJD4Q9H9V9 463 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 NLRC4Q9NPP4 1024 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 DDX25Q9UHL0 483 aaKnown RBP13.51□□□□□ -0.25
LITAF-221ENST00000622633 DMGDHQ9UI17 866 aaKnown RBP13.51□□□□□ -0.25
LITAF-221ENST00000622633 DAGLAQ9Y4D2 1042 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 GAKO14976 1311 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 F8W031 263 aaPredicted RBP13.51□□□□□ -0.25
LITAF-221ENST00000622633 hCG_1984214I3L0E3 225 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 VIL1P09327 827 aaKnown RBP13.51□□□□□ -0.25
LITAF-221ENST00000622633 DESP17661 470 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 EHHADHQ08426 723 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 VPS72Q15906 364 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 PDXDC1Q6P996 788 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 C16orf87Q6PH81 154 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 SAPCD2Q86UD0 394 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 SLF2Q8IX21 1173 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 MYOCDQ8IZQ8 938 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 MMGT1Q8N4V1 131 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 ZNF713Q8N859 430 aaPredicted RBP13.51□□□□□ -0.25
LITAF-221ENST00000622633 SPATA4Q8NEY3 305 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 HAS1Q92839 578 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 FGFBP2Q9BYJ0 223 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 UTP6Q9NYH9 597 aaKnown RBP13.51□□□□□ -0.25
LITAF-221ENST00000622633 TUBGCP4Q9UGJ1 667 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 WDR37Q9Y2I8 494 aa13.51□□□□□ -0.25
LITAF-221ENST00000622633 PNMA6FA0A0J9YX94 578 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 C6orf229H3BNL8 230 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 TRAF5O00463 557 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 BUB1O43683 1085 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 VCAM1P19320 739 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 SLC1A4P43007 532 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 GTF2IP78347 998 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 COASYQ13057 564 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 KBTBD12Q3ZCT8 623 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 CCDC70Q6NSX1 233 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 CCDC80Q76M96 950 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 TBC1D16Q8TBP0 767 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 SPIRE2Q8WWL2 714 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 DNAJC19Q96DA6 116 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 BRD8Q9H0E9 1235 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 KANSL2Q9H9L4 492 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 RIC8AQ9NPQ8 531 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 PANK4Q9NVE7 773 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 ATXN10Q9UBB4 475 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 ABCB11O95342 1321 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 SNHG28P0DPA3 235 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 GABPAQ06546 454 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 ADAM9Q13443 819 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 ASTE1Q2TB18 679 aaPredicted RBP13.5□□□□□ -0.25
LITAF-221ENST00000622633 EMC10Q5UCC4 262 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 TMC4Q7Z404 712 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 APLFQ8IW19 511 aaPredicted RBP13.5□□□□□ -0.25
LITAF-221ENST00000622633 TEX9Q8N6V9 391 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 AENQ8WTP8 325 aaKnown RBP13.5□□□□□ -0.25
LITAF-221ENST00000622633 MTMR8Q96EF0 704 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 LRRC27Q9C0I9 530 aa13.5□□□□□ -0.25
LITAF-221ENST00000622633 PENKP01210 267 aaPredicted RBP13.49□□□□□ -0.25
LITAF-221ENST00000622633 PRLRP16471 622 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 FUT4P22083 530 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 FKBP3Q00688 224 aaKnown RBP13.49□□□□□ -0.25
LITAF-221ENST00000622633 APBA1Q02410 837 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 ZNF543Q08ER8 600 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 PPP1R7Q15435 360 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 TDRD12Q587J7 1177 aaKnown RBP13.49□□□□□ -0.25
LITAF-221ENST00000622633 HGSNATQ68CP4 663 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 PPP4R3AQ6IN85 833 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 SND1Q7KZF4 910 aaKnown RBP eCLIP13.49□□□□□ -0.25
LITAF-221ENST00000622633 NELFCDQ8IXH7 590 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 DDX4Q9NQI0 724 aaKnown RBP13.49□□□□□ -0.25
LITAF-221ENST00000622633 HYOU1Q9Y4L1 999 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 COL4A3BPQ9Y5P4 624 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 IGKV6D-41A0A0C4DH26 115 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 NPHP3-ACAD11A0A0J9YXS1 232 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 USP17L10C9JJH3 530 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 IPO5O00410 1097 aaKnown RBP13.49□□□□□ -0.25
LITAF-221ENST00000622633 RIMBP2O15034 1052 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 PPIP5K2O43314 1243 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 ATP2C2O75185 946 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 SLURP2P0DP57 97 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 POLE2P56282 527 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 CACNB1Q02641 598 aaPredicted RBP13.49□□□□□ -0.25
LITAF-221ENST00000622633 ZCWPW2Q504Y3 356 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms