RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 EYA4O95677 639 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 MYCNP04198 464 aaPredicted RBP13.89□□□□□ -0.19
MSH6-215ENST00000622629 INTS8Q75QN2 995 aaKnown RBP13.89□□□□□ -0.19
MSH6-215ENST00000622629 DNAAF5Q86Y56 855 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 VPS37BQ9H9H4 285 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 NOC2LQ9Y3T9 749 aaKnown RBP13.89□□□□□ -0.19
MSH6-215ENST00000622629 RSPH10B2B2RC85 870 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 SART1O43290 800 aaKnown RBP13.89□□□□□ -0.19
MSH6-215ENST00000622629 DAPK3O43293 454 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 RSPH10BP0C881 870 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 TMOD1P28289 359 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 STX2P32856 288 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 IRX5P78411 483 aaPredicted RBP13.89□□□□□ -0.19
MSH6-215ENST00000622629 CUL1Q13616 776 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 SETDB1Q15047 1291 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 CEP55Q53EZ4 464 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 SGO2Q562F6 1265 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 SLC30A10Q6XR72 485 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 SPATA20Q8TB22 786 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 AZI2Q9H6S1 392 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 SCAF8Q9UPN6 1271 aaKnown RBP13.89□□□□□ -0.19
MSH6-215ENST00000622629 RGPD1P0DJD0 1748 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 MED24O75448 989 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 NEBLO76041 1014 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 GYS1P13807 737 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 GJB7Q6PEY0 223 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 FAM160B2Q86V87 743 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 ANKRD35Q8N283 1001 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 XXYLT1Q8NBI6 393 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 MTRQ99707 1265 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 RIOX1Q9H6W3 641 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 RAVER2Q9HCJ3 691 aaKnown RBP13.89□□□□□ -0.19
MSH6-215ENST00000622629 PRR12Q9ULL5 1215 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 ZNF148Q9UQR1 794 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 ASNSP08243 561 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 SLURP2P0DP57 97 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 KCNK18Q7Z418 384 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 TAF1DQ9H5J8 278 aaPredicted RBP13.88□□□□□ -0.19
MSH6-215ENST00000622629 A0A087WUV0 522 aaPredicted RBP13.88□□□□□ -0.19
MSH6-215ENST00000622629 FTLP02792 175 aaPredicted RBP13.88□□□□□ -0.19
MSH6-215ENST00000622629 MTERF2Q49AM1 385 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 DDX42Q86XP3 938 aaKnown RBP eCLIP13.88□□□□□ -0.19
MSH6-215ENST00000622629 EFCAB13Q8IY85 973 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 GLIS3Q8NEA6 775 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 NEK9Q8TD19 979 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.88□□□□□ -0.197e-7■■□□□ 13.6
MSH6-215ENST00000622629 MAK16Q9BXY0 300 aaKnown RBP13.88□□□□□ -0.19
MSH6-215ENST00000622629 NYAP2Q9P242 653 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 FAM169AQ9Y6X4 670 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 ROBO1Q9Y6N7 1651 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 ZRANB2O95218 330 aaKnown RBP eCLIP13.88□□□□□ -0.19
MSH6-215ENST00000622629 TAL1P17542 331 aaPredicted RBP13.88□□□□□ -0.19
MSH6-215ENST00000622629 RPA1P27694 616 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 PIK3CAP42336 1068 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 GALCP54803 685 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 MTMR1Q13613 665 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 VSIG1Q86XK7 387 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 ATP6V0A1Q93050 837 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 PNMA5Q96PV4 448 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 PAGR1Q9BTK6 254 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 INTS2Q9H0H0 1204 aaKnown RBP13.88□□□□□ -0.19
MSH6-215ENST00000622629 VIPAS39Q9H9C1 493 aa13.88□□□□□ -0.19
MSH6-215ENST00000622629 TOPAZ1Q8N9V7 1692 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 HMGB1P1B2RPK0 211 aaPredicted RBP13.87□□□□□ -0.19
MSH6-215ENST00000622629 GUCY1A3Q02108 690 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 EDRF1Q3B7T1 1238 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 PAPD7Q5XG87 772 aaKnown RBP13.87□□□□□ -0.19
MSH6-215ENST00000622629 CYP4F22Q6NT55 531 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 PAF1Q8N7H5 531 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 MAIP1Q8WWC4 291 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 EMSYQ7Z589 1322 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 EVI5O60447 810 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 ATF2P15336 505 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 HHIPL2Q6UWX4 724 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 ARHGAP27Q6ZUM4 889 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 SAAL1Q96ER3 474 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 RMDN3Q96TC7 470 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 PACSIN1Q9BY11 444 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 BLOC1S4Q9NUP1 217 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 PCDHB4Q9Y5E5 795 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 CD2APQ9Y5K6 639 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 HIP1RO75146 1068 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 ZKSCAN8Q15776 578 aaPredicted RBP13.87□□□□□ -0.19
MSH6-215ENST00000622629 LDHDQ86WU2 507 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 COL23A1Q86Y22 540 aaPredicted RBP13.87□□□□□ -0.19
MSH6-215ENST00000622629 RHOT2Q8IXI1 618 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 RPUSD2Q8IZ73 545 aaKnown RBP13.87□□□□□ -0.19
MSH6-215ENST00000622629 CCDC63Q8NA47 563 aa13.87□□□□□ -0.19
MSH6-215ENST00000622629 FIGNQ5HY92 759 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 WDR93Q6P2C0 686 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 ANKS1AQ92625 1134 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 TBK1Q9UHD2 729 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 AFDNP55196 1824 aaKnown RBP13.86□□□□□ -0.19
MSH6-215ENST00000622629 KLRC4O43908 158 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 ECEL1O95672 775 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 SOX5P35711 763 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 VAMP7P51809 220 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 CCDC6Q16204 474 aa13.86□□□□□ -0.19
MSH6-215ENST00000622629 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.86□□□□□ -0.19
MSH6-215ENST00000622629 TNFRSF25Q93038 417 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms