RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 ZNF658Q5TYW1 1059 aaPredicted RBP19.75■□□□□ 0.75
PTCHD3-202ENST00000622555 TIPINQ9BVW5 301 aa19.75■□□□□ 0.75
PTCHD3-202ENST00000622555 PPME1Q9Y570 386 aa19.75■□□□□ 0.75
PTCHD3-202ENST00000622555 COL4A3BPQ9Y5P4 624 aa19.75■□□□□ 0.75
PTCHD3-202ENST00000622555 ZEB2O60315 1214 aa19.74■□□□□ 0.75
PTCHD3-202ENST00000622555 KPNA6O60684 536 aa19.74■□□□□ 0.75
PTCHD3-202ENST00000622555 F2P00734 622 aa19.74■□□□□ 0.75
PTCHD3-202ENST00000622555 RFC5P40937 340 aa19.74■□□□□ 0.75
PTCHD3-202ENST00000622555 NKX3-2P78367 333 aa19.74■□□□□ 0.75
PTCHD3-202ENST00000622555 EMC2Q15006 297 aa19.74■□□□□ 0.75
PTCHD3-202ENST00000622555 FAM102BQ5T8I3 360 aa19.74■□□□□ 0.75
PTCHD3-202ENST00000622555 C11orf57Q6ZUT1 292 aaPredicted RBP19.74■□□□□ 0.75
PTCHD3-202ENST00000622555 SMYD4Q8IYR2 804 aaPredicted RBP19.74■□□□□ 0.75
PTCHD3-202ENST00000622555 MCPH1Q8NEM0 835 aa19.74■□□□□ 0.75
PTCHD3-202ENST00000622555 SLC7A3Q8WY07 619 aa19.74■□□□□ 0.75
PTCHD3-202ENST00000622555 KAT2BQ92831 832 aa19.74■□□□□ 0.75
PTCHD3-202ENST00000622555 HPS3Q969F9 1004 aa19.74■□□□□ 0.75
PTCHD3-202ENST00000622555 CEP89Q96ST8 783 aa19.74■□□□□ 0.75
PTCHD3-202ENST00000622555 GDAQ9Y2T3 454 aa19.74■□□□□ 0.75
PTCHD3-202ENST00000622555 SFI1A8K8P3 1242 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 ZBTB42B2RXF5 422 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 GAP43P17677 238 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 PURAQ00577 322 aaKnown RBP19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 EHHADHQ08426 723 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 TBC1D8BQ0IIM8 1120 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 MAPK7Q13164 816 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 MFSD10Q14728 455 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 ZNF484Q5JVG2 852 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 SFR1Q86XK3 245 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 DRC1Q96MC2 740 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 DHX33Q9H6R0 707 aaKnown RBP19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 PARVGQ9HBI0 331 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 TBC1D7Q9P0N9 293 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 EVPLQ92817 2033 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 HTTP42858 3142 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 INSRRP14616 1297 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 PSEN2P49810 448 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 PSMD2Q13200 908 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 KIAA0753Q2KHM9 967 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 FAM26FQ5R3K3 315 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 DAW1Q8N136 415 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 MYCT1Q8N699 235 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 MLKLQ8NB16 471 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 TRAPPC12Q8WVT3 735 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 KATNAL1Q9BW62 490 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 GTPBP4Q9BZE4 634 aaKnown RBP19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 UNC93B1Q9H1C4 597 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 SLC39A2Q9NP94 309 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 GPRC5CQ9NQ84 441 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 XPNPEP1Q9NQW7 623 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 PDLIM7Q9NR12 457 aa19.73■□□□□ 0.75
PTCHD3-202ENST00000622555 ZNF131P52739 623 aa19.72■□□□□ 0.75
PTCHD3-202ENST00000622555 SOX10P56693 466 aa19.72■□□□□ 0.75
PTCHD3-202ENST00000622555 IGBP1P78318 339 aa19.72■□□□□ 0.75
PTCHD3-202ENST00000622555 STK4Q13043 487 aa19.72■□□□□ 0.75
PTCHD3-202ENST00000622555 PPFIA1Q13136 1202 aa19.72■□□□□ 0.75
PTCHD3-202ENST00000622555 KLHDC9Q8NEP7 349 aa19.72■□□□□ 0.75
PTCHD3-202ENST00000622555 NAT10Q9H0A0 1025 aaKnown RBP19.72■□□□□ 0.75
PTCHD3-202ENST00000622555 DACH1Q9UI36 760 aa19.72■□□□□ 0.75
PTCHD3-202ENST00000622555 COL1A2P08123 1366 aa19.72■□□□□ 0.75
PTCHD3-202ENST00000622555 MAFO75444 373 aaPredicted RBP19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 MYCP01106 439 aaPredicted RBP19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 CST5P28325 142 aaPredicted RBP19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 CXCL17Q6UXB2 119 aa19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 RNF180Q86T96 592 aa19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 EXOC8Q8IYI6 725 aa19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 KIFAP3Q92845 792 aa19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 MTG1Q9BT17 334 aaPredicted RBP19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 SCN10AQ9Y5Y9 1956 aa19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 HAS3O00219 553 aa19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 GRIK4Q16099 956 aa19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 KCNA10Q16322 511 aa19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 ODR4Q5SWX8 454 aa19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 LHX8Q68G74 356 aa19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 PCSK9Q8NBP7 692 aaKnown RBP19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 KIAA0895Q8NCT3 520 aa19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 TMEM143Q96AN5 459 aa19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 POLR3FQ9H1D9 316 aaPredicted RBP19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 SEL1LQ9UBV2 794 aa19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 MAPK8IP1Q9UQF2 711 aa19.71■□□□□ 0.75
PTCHD3-202ENST00000622555 CAVIN2O95810 425 aa19.7■□□□□ 0.74
PTCHD3-202ENST00000622555 SMIM10L2AP0DMW4 78 aa19.7■□□□□ 0.74
PTCHD3-202ENST00000622555 SMIM10L2BP0DMW5 78 aa19.7■□□□□ 0.74
PTCHD3-202ENST00000622555 PLS3P13797 630 aa19.7■□□□□ 0.74
PTCHD3-202ENST00000622555 CD44P16070 742 aaKnown RBP19.7■□□□□ 0.74
PTCHD3-202ENST00000622555 PRCPP42785 496 aa19.7■□□□□ 0.74
PTCHD3-202ENST00000622555 ZNF165P49910 485 aa19.7■□□□□ 0.74
PTCHD3-202ENST00000622555 LRRC41Q15345 812 aa19.7■□□□□ 0.74
PTCHD3-202ENST00000622555 FBXO46Q6PJ61 603 aaPredicted RBP19.7■□□□□ 0.74
PTCHD3-202ENST00000622555 JPH2Q9BR39 696 aaPredicted RBP19.7■□□□□ 0.74
PTCHD3-202ENST00000622555 MRPL44Q9H9J2 332 aaKnown RBP19.7■□□□□ 0.74
PTCHD3-202ENST00000622555 SUGCTQ9HAC7 445 aa19.7■□□□□ 0.74
PTCHD3-202ENST00000622555 OLFML3Q9NRN5 406 aa19.7■□□□□ 0.74
PTCHD3-202ENST00000622555 LARSQ9P2J5 1176 aaKnown RBP19.7■□□□□ 0.74
PTCHD3-202ENST00000622555 PCDHA2Q9Y5H9 948 aa19.7■□□□□ 0.74
PTCHD3-202ENST00000622555 PPP1R3GB7ZBB8 358 aa19.69■□□□□ 0.74
PTCHD3-202ENST00000622555 C22orf31O95567 290 aa19.69■□□□□ 0.74
PTCHD3-202ENST00000622555 ASGR1P07306 291 aa19.69■□□□□ 0.74
PTCHD3-202ENST00000622555 STIM1Q13586 685 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms