RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 AP1B1Q10567 949 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 PTGDRQ13258 359 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 SPDYE1Q8NFV5 336 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-210ENST00000621266 BATF3Q9NR55 127 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 THRAP3Q9Y2W1 955 aaKnown RBP10.58□□□□□ -0.72
COL4A6-210ENST00000621266 PRAMEF22A3QJZ6 481 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 PFKFB2O60825 505 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 FGGP02679 453 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 OR52Z1P0C646 297 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 IL6STP40189 918 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-210ENST00000621266 PLD3Q8IV08 490 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 ZNF654Q8IZM8 581 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 ZNF274Q96GC6 653 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-210ENST00000621266 NEUROG2Q9H2A3 272 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 OLFML3Q9NRN5 406 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 SLC13A4Q9UKG4 626 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 PALLDQ8WX93 1383 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 ZNF804BA4D1E1 1349 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 ZMYM6O95789 1325 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 KPNA2P52292 529 aaKnown RBP10.58□□□□□ -0.72
COL4A6-210ENST00000621266 ARFIP2P53365 341 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 SCRN1Q12765 414 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 ACAD11Q709F0 780 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 BZW1Q7L1Q6 419 aaKnown RBP10.58□□□□□ -0.72
COL4A6-210ENST00000621266 NEK8Q86SG6 692 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 ALKBH8Q96BT7 664 aaKnown RBP10.58□□□□□ -0.72
COL4A6-210ENST00000621266 BTBD6Q96KE9 485 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 FAM193BQ96PV7 902 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-210ENST00000621266 EDEM3Q9BZQ6 932 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 UTP6Q9NYH9 597 aaKnown RBP10.58□□□□□ -0.72
COL4A6-210ENST00000621266 GTSE1Q9NYZ3 720 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 PCDHA12Q9UN75 941 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 RNF123Q5XPI4 1314 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 H0Y626 953 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 TEDDM1Q5T9Z0 273 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 HEATR4Q86WZ0 1026 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 CALN1Q9BXU9 219 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 GREM2Q9H772 168 aa10.58□□□□□ -0.72
COL4A6-210ENST00000621266 SSH2Q76I76 1423 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 USP17L12C9JPN9 530 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 USP17L21D6R901 530 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 GOLGA8MH3BSY2 632 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 GRK2P25098 689 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 FAM26FQ5R3K3 315 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 LRRC8EQ6NSJ5 796 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 TAGAPQ8N103 731 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 OR9Q1Q8NGQ5 310 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 UBN1Q9NPG3 1134 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 SEC31BQ9NQW1 1179 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 CHCHD3Q9NX63 227 aaKnown RBP10.57□□□□□ -0.72
COL4A6-210ENST00000621266 GDF11O95390 407 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 SKIV2LQ15477 1246 aaKnown RBP10.57□□□□□ -0.72
COL4A6-210ENST00000621266 SLFNL1Q499Z3 407 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 RETREG2Q8NC44 543 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 SDR42E1Q8WUS8 393 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 PANX2Q96RD6 677 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 CD248Q9HCU0 757 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 COPRSQ9NQ92 184 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 ESRRBO95718 433 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 SUPT20HL1Q3ZLR7 823 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 PARD3BQ8TEW8 1205 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 PRMT1Q99873 361 aaKnown RBP10.57□□□□□ -0.72
COL4A6-210ENST00000621266 HESX1Q9UBX0 185 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 RIMS1Q86UR5 1692 aaKnown RBP10.57□□□□□ -0.72
COL4A6-210ENST00000621266 SYNMO15061 1565 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 IREB2P48200 963 aaKnown RBP10.57□□□□□ -0.72
COL4A6-210ENST00000621266 PMS2P54278 862 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 PRAMEP78395 509 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 HDDC2Q7Z4H3 204 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 DIABLOQ9NR28 239 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 SUN2Q9UH99 717 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 RGS12O14924 1447 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 A0A0G2JLW4 131 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 ESYT3A0FGR9 886 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 POTEB3A0JP26 581 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 USP27XA6NNY8 438 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 MEFVO15553 781 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-210ENST00000621266 PALMO75781 387 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 CHEK2O96017 543 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 SERPING1P05155 500 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 PGM1P36871 562 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 AARSP49588 968 aaKnown RBP eCLIP10.57□□□□□ -0.72
COL4A6-210ENST00000621266 LRRC24Q50LG9 513 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 TJAP1Q5JTD0 557 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 NAIF1Q69YI7 327 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-210ENST00000621266 POTEBQ6S5H4 581 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 ZNF710Q8N1W2 664 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 B4GALNT2Q8NHY0 566 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 P2RX5Q93086 422 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 GPBP1L1Q9HC44 474 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-210ENST00000621266 ZSWIM6Q9HCJ5 1215 aa10.57□□□□□ -0.72
COL4A6-210ENST00000621266 DDX25Q9UHL0 483 aaKnown RBP10.57□□□□□ -0.72
COL4A6-210ENST00000621266 MAP3K4Q9Y6R4 1608 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 NR2F2P24468 414 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 CACNB1Q02641 598 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-210ENST00000621266 EFTUD2Q15029 972 aaKnown RBP eCLIP10.56□□□□□ -0.72
COL4A6-210ENST00000621266 DEPDC1Q5TB30 811 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 IFNL3Q8IZI9 196 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 PIGBQ92521 554 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms