RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 SYCP3Q8IZU3 236 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 LNX1Q8TBB1 728 aaPredicted RBP17.44■□□□□ 0.38
DKC1-213ENST00000620277 SLC20A1Q8WUM9 679 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 RAPGEF5Q92565 580 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 FAM118BQ9BPY3 351 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 UTP11Q9Y3A2 253 aaKnown RBP17.44■□□□□ 0.38
DKC1-213ENST00000620277 ESYT2A0FGR8 921 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 DDTLA6NHG4 134 aaPredicted RBP17.44■□□□□ 0.38
DKC1-213ENST00000620277 RBAK-RBAKDNI3L0D1 243 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 SPATA31C1P0DKV0 1188 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 FGFR4P22455 802 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 MESDQ14696 234 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 TRIP13Q15645 432 aaPredicted RBP17.44■□□□□ 0.38
DKC1-213ENST00000620277 C2CD6Q53TS8 623 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 ZNF572Q7Z3I7 529 aaPredicted RBP17.44■□□□□ 0.38
DKC1-213ENST00000620277 VPS36Q86VN1 386 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 C18orf8Q96DM3 657 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 POP1Q99575 1024 aaKnown RBP17.44■□□□□ 0.38
DKC1-213ENST00000620277 AMFRQ9UKV5 643 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 GMNCA6NCL1 334 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 CTNND1O60716 968 aaKnown RBP17.44■□□□□ 0.38
DKC1-213ENST00000620277 FAM186BQ8IYM0 893 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 SLC35C1Q96A29 364 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 ADAM33Q9BZ11 813 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 MTFR1LQ9H019 292 aa17.44■□□□□ 0.38
DKC1-213ENST00000620277 NUCKS1Q9H1E3 243 aaKnown RBP17.44■□□□□ 0.38
DKC1-213ENST00000620277 DNM1LO00429 736 aa17.43■□□□□ 0.38
DKC1-213ENST00000620277 IFI35P80217 286 aaPredicted RBP17.43■□□□□ 0.38
DKC1-213ENST00000620277 SNX1Q13596 522 aa17.43■□□□□ 0.38
DKC1-213ENST00000620277 ZSWIM2Q8NEG5 633 aa17.43■□□□□ 0.38
DKC1-213ENST00000620277 LRRC4BQ9NT99 713 aa17.43■□□□□ 0.38
DKC1-213ENST00000620277 CTTNBP2NLQ9P2B4 639 aa17.43■□□□□ 0.38
DKC1-213ENST00000620277 DBR1Q9UK59 544 aaKnown RBP17.43■□□□□ 0.38
DKC1-213ENST00000620277 RABGAP1Q9Y3P9 1069 aa17.43■□□□□ 0.38
DKC1-213ENST00000620277 MYH1P12882 1939 aa17.43■□□□□ 0.38
DKC1-213ENST00000620277 PHLPP1O60346 1717 aa17.43■□□□□ 0.38
DKC1-213ENST00000620277 MYH4Q9Y623 1939 aa17.43■□□□□ 0.38
DKC1-213ENST00000620277 GOLGA8IPA6NC78 632 aa17.43■□□□□ 0.38
DKC1-213ENST00000620277 GOLGA8JA6NMD2 632 aa17.43■□□□□ 0.38
DKC1-213ENST00000620277 MEIS2O14770 477 aa17.43■□□□□ 0.38
DKC1-213ENST00000620277 TNFAIP3P21580 790 aa17.43■□□□□ 0.38
DKC1-213ENST00000620277 SSTR3P32745 418 aaPredicted RBP17.43■□□□□ 0.38
DKC1-213ENST00000620277 FAM133BQ5BKY9 247 aaKnown RBP17.43■□□□□ 0.38
DKC1-213ENST00000620277 LRRC57Q8N9N7 239 aa17.43■□□□□ 0.38
DKC1-213ENST00000620277 CTNNBL1Q8WYA6 563 aaPredicted RBP17.43■□□□□ 0.38
DKC1-213ENST00000620277 KRT35Q92764 455 aa17.43■□□□□ 0.38
DKC1-213ENST00000620277 KAT5Q92993 513 aa17.43■□□□□ 0.38
DKC1-213ENST00000620277 IQCDQ96DY2 449 aa17.43■□□□□ 0.38
DKC1-213ENST00000620277 THOC1Q96FV9 657 aaKnown RBP17.43■□□□□ 0.38
DKC1-213ENST00000620277 DYDC2Q96IM9 177 aa17.43■□□□□ 0.38
DKC1-213ENST00000620277 ROBO3Q96MS0 1386 aa17.42■□□□□ 0.38
DKC1-213ENST00000620277 TMEM150BA6NC51 233 aa17.42■□□□□ 0.38
DKC1-213ENST00000620277 HMGB1P1B2RPK0 211 aaPredicted RBP17.42■□□□□ 0.38
DKC1-213ENST00000620277 MSH4O15457 936 aa17.42■□□□□ 0.38
DKC1-213ENST00000620277 GNA14O95837 355 aa17.42■□□□□ 0.38
DKC1-213ENST00000620277 RPSAP08865 295 aaKnown RBP17.42■□□□□ 0.38
DKC1-213ENST00000620277 SETQ01105 290 aaPredicted RBP17.42■□□□□ 0.38
DKC1-213ENST00000620277 CERKLQ49MI3 558 aaPredicted RBP17.42■□□□□ 0.38
DKC1-213ENST00000620277 ASTN1O14525 1302 aa17.42■□□□□ 0.38
DKC1-213ENST00000620277 KDM3AQ9Y4C1 1321 aa17.42■□□□□ 0.38
DKC1-213ENST00000620277 HLA-DOAP06340 250 aa17.42■□□□□ 0.38
DKC1-213ENST00000620277 VIMP08670 466 aaKnown RBP17.42■□□□□ 0.38
DKC1-213ENST00000620277 HSPA9P38646 679 aaKnown RBP17.42■□□□□ 0.38
DKC1-213ENST00000620277 CDR1P51861 262 aa17.42■□□□□ 0.38
DKC1-213ENST00000620277 DLG4P78352 724 aa17.42■□□□□ 0.38
DKC1-213ENST00000620277 EPHA7Q15375 998 aa17.42■□□□□ 0.38
DKC1-213ENST00000620277 NT5DC3Q86UY8 548 aa17.42■□□□□ 0.38
DKC1-213ENST00000620277 FBXO25Q8TCJ0 367 aa17.42■□□□□ 0.38
DKC1-213ENST00000620277 SCFD2Q8WU76 684 aa17.42■□□□□ 0.38
DKC1-213ENST00000620277 LRRC45Q96CN5 670 aa17.42■□□□□ 0.38
DKC1-213ENST00000620277 EIF2AK1Q9BQI3 630 aaKnown RBP17.42■□□□□ 0.38
DKC1-213ENST00000620277 SMCHD1A6NHR9 2005 aa17.42■□□□□ 0.38
DKC1-213ENST00000620277 EIF4E1BA6NMX2 242 aaKnown RBP17.41■□□□□ 0.38
DKC1-213ENST00000620277 FAM107AO95990 144 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 DCAF12L1Q5VU92 463 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 ALG3Q92685 438 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 FMO2Q99518 471 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 KIAA1551Q9HCM1 1747 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 TCRBV7S2A1N4TA0A589 114 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 F5H6K3 240 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 CALUO43852 315 aaPredicted RBP17.41■□□□□ 0.38
DKC1-213ENST00000620277 EXOC3O60645 756 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 ATP2B4P23634 1241 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 KLRC3Q07444 240 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 EPC2Q52LR7 807 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 OSBPL7Q9BZF2 842 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 AZI2Q9H6S1 392 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 DNAJC18Q9H819 358 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 RNF14Q9UBS8 474 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 FOXN3O00409 490 aaPredicted RBP17.41■□□□□ 0.38
DKC1-213ENST00000620277 SORBS3O60504 671 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 CLK2P49760 499 aaKnown RBP17.41■□□□□ 0.38
DKC1-213ENST00000620277 PPP2R2AP63151 447 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 DR1Q01658 176 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 DAB2IPQ5VWQ8 1189 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 CCDC26Q8TAB7 109 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 SEC16BQ96JE7 1060 aa17.41■□□□□ 0.38
DKC1-213ENST00000620277 PDE6BP35913 854 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 GCLMP48507 274 aa17.4■□□□□ 0.38
DKC1-213ENST00000620277 ICA1Q05084 483 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms