RNA–Protein interactions for RNA: ENST00000620149.1

SPTSSB-205, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 BASIC

Gene SPTSSB, Length 231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-205ENST00000620149 RCSD1Q6JBY9 416 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 RUFY4Q6ZNE9 571 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 UBE2R2Q712K3 238 aaPredicted RBP1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 SPATC1Q76KD6 591 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 APBB1IPQ7Z5R6 666 aaPredicted RBP1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 MILR1Q7Z6M3 343 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 DDX42Q86XP3 938 aaKnown RBP eCLIP1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 PASD1Q8IV76 773 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 C7orf61Q8IZ16 206 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 MYO1HQ8N1T3 1032 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 PPM1KQ8N3J5 372 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 CRACR2BQ8N4Y2 399 aaPredicted RBP1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 FIBCD1Q8N539 461 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 C19orf47Q8N9M1 422 aaKnown RBP1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 WDR66Q8TBY9 1149 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 SEC14L1Q92503 715 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 BRF1Q92994 677 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 DHRS1Q96LJ7 313 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 TMEM209Q96SK2 561 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 APBA2Q99767 749 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 LRRC3Q9BY71 257 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 AP5M1Q9H0R1 490 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 GBP3Q9H0R5 595 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 TMX4Q9H1E5 349 aaPredicted RBP1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 PHAXQ9H814 394 aaKnown RBP1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 XPO5Q9HAV4 1204 aaKnown RBP eCLIP1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 NGRNQ9NPE2 291 aaKnown RBP1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 DTLQ9NZJ0 730 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 NDOR1Q9UHB4 597 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 SFMBT1Q9UHJ3 866 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 NOB1Q9ULX3 412 aaKnown RBP1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 MSRB2Q9Y3D2 182 aa1.91□□□□□ -2.1
SPTSSB-205ENST00000620149 COL4A3Q01955 1670 aa1.9□□□□□ -2.1
SPTSSB-205ENST00000620149 TRBV23-1A0A0A0MS06 115 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 A0A1W2PQH9 124 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 E2F8A0AVK6 867 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 PLD2O14939 933 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 SUSD5O60279 629 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 KATNA1O75449 491 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 SNUPNO95149 360 aaKnown RBP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 RAPGEF3O95398 923 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 LRG1P02750 347 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 TP53P04637 393 aaPredicted RBP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 HSP90AA1P07900 732 aaKnown RBP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 FAM153BP0C7A2 387 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 U2AF1L5P0DN76 240 aaPredicted RBP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 GARTP22102 1010 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 CCKBRP32239 447 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 CCNFP41002 786 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 KCNJ6P48051 423 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 PPM1FP49593 454 aaPredicted RBP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 CDKN1CP49918 316 aaPredicted RBP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 SCNN1BP51168 640 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 ZNF445P59923 1031 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 IL2P60568 153 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 SUMO1P63165 101 aaKnown RBP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 TMPRSS15P98073 1019 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 U2AF1Q01081 240 aaKnown RBP eCLIP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 HLTFQ14527 1009 aaKnown RBP eCLIP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 USP10Q14694 798 aaKnown RBP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 TTF1Q15361 905 aaPredicted RBP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 LONRF2Q1L5Z9 754 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 GFOD2Q3B7J2 385 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 FNDC3BQ53EP0 1204 aaKnown RBP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 TM4SF20Q53R12 229 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 RUSC1-AS1Q66K80 236 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 MBLAC2Q68D91 279 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 IQSEC1Q6DN90 963 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 TSHZ1Q6ZSZ6 1077 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 NLRC3Q7RTR2 1065 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 PNMA8AQ86V59 439 aaPredicted RBP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 C11orf74Q86VG3 221 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 PROSER1Q86XN7 944 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 CCDC144CPQ8IYA2 1237 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 ZBTB38Q8NAP3 1195 aaPredicted RBP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 ZBTB8BQ8NAP8 495 aaPredicted RBP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 OR2W6PQ8NHA6 318 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 STAG1Q8WVM7 1258 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 CFHR4Q92496 578 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 DPF3Q92784 378 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 TSR2Q969E8 191 aaKnown RBP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 ZNF669Q96BR6 464 aaPredicted RBP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 TTC1Q99614 292 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 AARSD1Q9BTE6 412 aaKnown RBP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 SLC29A3Q9BZD2 475 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 UBA5Q9GZZ9 404 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 CNNM2Q9H8M5 875 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 KCNQ5Q9NR82 932 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 SLC5A4Q9NY91 659 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 GMIPQ9P107 970 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 BCCIPQ9P287 314 aaKnown RBP eCLIP1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 RCAN3Q9UKA8 241 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 PCDHB10Q9UN67 800 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 MAPRE3Q9UPY8 281 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 LRP12Q9Y561 859 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 WASHC2AQ641Q2 1341 aa1.9□□□□□ -2.11
SPTSSB-205ENST00000620149 ANKRD34BA5PLL1 514 aa1.89□□□□□ -2.11
SPTSSB-205ENST00000620149 CAPN14A8MX76 684 aa1.89□□□□□ -2.11
SPTSSB-205ENST00000620149 PRODHO43272 600 aa1.89□□□□□ -2.11
SPTSSB-205ENST00000620149 TSPAN6O43657 245 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms