RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 VCPP55072 806 aaKnown RBP10.39□□□□□ -0.75
SYN3-213ENST00000619146 TCF15Q12870 199 aa10.39□□□□□ -0.75
SYN3-213ENST00000619146 SLC39A14Q15043 492 aa10.39□□□□□ -0.75
SYN3-213ENST00000619146 STK38Q15208 465 aa10.39□□□□□ -0.75
SYN3-213ENST00000619146 SF3A1Q15459 793 aaKnown RBP10.39□□□□□ -0.75
SYN3-213ENST00000619146 INF2Q27J81 1249 aa10.39□□□□□ -0.75
SYN3-213ENST00000619146 PAN2Q504Q3 1202 aaKnown RBP10.39□□□□□ -0.75
SYN3-213ENST00000619146 HERC4Q5GLZ8 1057 aaPredicted RBP10.39□□□□□ -0.75
SYN3-213ENST00000619146 EARS2Q5JPH6 523 aaKnown RBP10.39□□□□□ -0.75
SYN3-213ENST00000619146 CELF3Q5SZQ8 465 aaKnown RBP10.39□□□□□ -0.75
SYN3-213ENST00000619146 UTP14CQ5TAP6 766 aaKnown RBP10.39□□□□□ -0.75
SYN3-213ENST00000619146 XRRA1Q6P2D8 792 aa10.39□□□□□ -0.75
SYN3-213ENST00000619146 MOXD1Q6UVY6 613 aa10.39□□□□□ -0.75
SYN3-213ENST00000619146 RBM23Q86U06 439 aaKnown RBP10.39□□□□□ -0.75
SYN3-213ENST00000619146 FCHSD1Q86WN1 690 aa10.39□□□□□ -0.75
SYN3-213ENST00000619146 LEO1Q8WVC0 666 aaPredicted RBP10.39□□□□□ -0.75
SYN3-213ENST00000619146 EDAQ92838 391 aa10.39□□□□□ -0.75
SYN3-213ENST00000619146 EMID1Q96A84 441 aaPredicted RBP10.39□□□□□ -0.75
SYN3-213ENST00000619146 IWS1Q96ST2 819 aa10.39□□□□□ -0.75
SYN3-213ENST00000619146 C16orf70Q9BSU1 422 aa10.39□□□□□ -0.75
SYN3-213ENST00000619146 KCNH6Q9H252 994 aa10.39□□□□□ -0.75
SYN3-213ENST00000619146 MLXIPQ9HAP2 919 aa10.39□□□□□ -0.75
SYN3-213ENST00000619146 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.39□□□□□ -0.75
SYN3-213ENST00000619146 CACNA1AO00555 2505 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 C2orf16Q68DN1 1984 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 CYP3A7-CYP3A51PA0A087WV96 503 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 FAM205CA6NFA0 338 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 H3BRB1 525 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 SPTLC2O15270 562 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 GFRA3O60609 400 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 PPP6R2O75170 966 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 LGALS2P05162 132 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 CYP3A4P08684 503 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 CYP3A7P24462 503 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 DNAJB1P25685 340 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 MCM7P33993 719 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 ARHGAP4P98171 946 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 RBM10P98175 930 aaKnown RBP10.38□□□□□ -0.75
SYN3-213ENST00000619146 CEBPZQ03701 1054 aaKnown RBP10.38□□□□□ -0.75
SYN3-213ENST00000619146 SMAD4Q13485 552 aaKnown RBP10.38□□□□□ -0.75
SYN3-213ENST00000619146 COL19A1Q14993 1142 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 ZNF174Q15697 407 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 CTC1Q2NKJ3 1217 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 LETM2Q2VYF4 491 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 PPP4R3AQ6IN85 833 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 TRIM67Q6ZTA4 783 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 SUGP1Q8IWZ8 645 aaKnown RBP10.38□□□□□ -0.75
SYN3-213ENST00000619146 LINC00301Q8NCQ3 95 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 POP1Q99575 1024 aaKnown RBP10.38□□□□□ -0.75
SYN3-213ENST00000619146 PDCD2LQ9BRP1 358 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 TUT1Q9H6E5 874 aaKnown RBP10.38□□□□□ -0.75
SYN3-213ENST00000619146 BARX2Q9UMQ3 279 aaPredicted RBP10.38□□□□□ -0.75
SYN3-213ENST00000619146 CLIC4Q9Y696 253 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 DMXL1Q9Y485 3027 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 DCHS1Q96JQ0 3298 aa10.38□□□□□ -0.75
SYN3-213ENST00000619146 DMDP11532 3685 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 ADGRA3Q8IWK6 1321 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 GOLGA6L4A6NEF3 574 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 NOP56O00567 594 aaKnown RBP10.37□□□□□ -0.75
SYN3-213ENST00000619146 CCNT1O60563 726 aaKnown RBP10.37□□□□□ -0.75
SYN3-213ENST00000619146 PPFIA4O75335 1185 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 LINC00271P0C7V0 271 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 CIITAP33076 1130 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 BMPR1AP36894 532 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 ME1P48163 572 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 GATMP50440 423 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 PTPN5P54829 565 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 BTG3Q14201 252 aaPredicted RBP10.37□□□□□ -0.75
SYN3-213ENST00000619146 PGM5Q15124 567 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 PTPAQ15257 358 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 ARL6IP4Q66PJ3 421 aaKnown RBP10.37□□□□□ -0.75
SYN3-213ENST00000619146 RUFY4Q6ZNE9 571 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 CRYGNQ8WXF5 182 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 ZBTB10Q96DT7 871 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 CHAMP1Q96JM3 812 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 RPGRIP1Q96KN7 1286 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 C11orf84Q9BUA3 381 aaPredicted RBP10.37□□□□□ -0.75
SYN3-213ENST00000619146 APOL5Q9BWW9 433 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 PCDHB6Q9Y5E3 794 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 FRYLO94915 3013 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 ZNF292O60281 2723 aa10.37□□□□□ -0.75
SYN3-213ENST00000619146 FRMPD4Q14CM0 1322 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 H0Y858 1186 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 PER2O15055 1255 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 NEMFO60524 1076 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 PRPF40AO75400 957 aaKnown RBP10.36□□□□□ -0.75
SYN3-213ENST00000619146 STAM2O75886 525 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 PDGFBP01127 241 aaPredicted RBP10.36□□□□□ -0.75
SYN3-213ENST00000619146 CHRNA1P02708 482 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 HOXD8P13378 290 aaPredicted RBP10.36□□□□□ -0.75
SYN3-213ENST00000619146 ZNF76P36508 570 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 PRPHP41219 470 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 NRIP1P48552 1158 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 UBE2HP62256 183 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 ZXDAP98168 799 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 ATP2C1P98194 919 aaPredicted RBP10.36□□□□□ -0.75
SYN3-213ENST00000619146 PTGDRQ13258 359 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 ADAM15Q13444 863 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 CAMK1Q14012 370 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 NBR1Q14596 966 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms