RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 FAM25AB3EWG3 89 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 FAM25CB3EWG5 89 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 FAM25GB3EWG6 89 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 TXNDC9O14530 226 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 EIF3HO15372 352 aaKnown RBP eCLIP3.3□□□□□ -1.88
NEB-220ENST00000618972 IDH3BO43837 385 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 CATSPER2Q96P56 530 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 BPIFA3Q9BQP9 254 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 STK17AQ9UEE5 414 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 PARP10Q53GL7 1025 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 NLRP10Q86W26 655 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 PARNO95453 639 aaKnown RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 PYGBP11216 843 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 MTM1Q13496 603 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 MAPKAPK5Q8IW41 473 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 BTBD6Q96KE9 485 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 ACP6Q9NPH0 428 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 UBAP1Q9NZ09 502 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 APOBEC2Q9Y235 224 aaKnown RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 HPSEQ9Y251 543 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 STARD3NLO95772 234 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 CTTNQ14247 550 aaKnown RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 UBE2SQ16763 222 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 NEDD4P46934 1319 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 PDE9AO76083 593 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 FUT2Q10981 343 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 WTAPQ15007 396 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 RYDENQ9NUL5 291 aaKnown RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 SEMA3EO15041 775 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 DKC1O60832 514 aaKnown RBP eCLIP3.3□□□□□ -1.88
NEB-220ENST00000618972 TCP11X2Q5H9J9 407 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 INPP5DQ92835 1189 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 VPS37BQ9H9H4 285 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 FAM196BA6NMK8 535 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 APOEP02649 317 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 KRT13P13646 458 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 IFNA8P32881 189 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 DCTN2Q13561 401 aaKnown RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 RNF207Q6ZRF8 634 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 ALLCQ8N6M5 410 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 EHMT1Q9H9B1 1298 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 CCDC194A0A1B0GVG4 234 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 POTEFA5A3E0 1075 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 FAM25EA8MYX2 175 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 FMNL1O95466 1100 aaPredicted RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 ANP32DO95626 131 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 POTEIP0CG38 1075 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 POLR2FP61218 127 aaKnown RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 ZCWPW2Q504Y3 356 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 POTEEQ6S8J3 1075 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 PEX26Q7Z412 305 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 SYCP3Q8IZU3 236 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 ZSWIM2Q8NEG5 633 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 CNBD2Q96M20 576 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 ANKRD2Q9GZV1 360 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 HSPA1AP0DMV8 641 aaKnown RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 HSPA1BP0DMV9 641 aaKnown RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 TCF3P15923 654 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 CD209Q9NNX6 404 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 FBXL5Q9UKA1 691 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 ABCC11Q96J66 1382 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 EPRSP07814 1512 aaKnown RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 UBTFL6P0CB48 400 aaPredicted RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 UBXN2AP68543 259 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 PRPF4BQ13523 1007 aaKnown RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 KCNK18Q7Z418 384 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 LSM14BQ9BX40 385 aaKnown RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 DAPK3O43293 454 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 KRT15P19012 456 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 CTCFP49711 727 aaPredicted RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 ADCY2Q08462 1091 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 LRRC14Q15048 493 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 CAVIN4Q5BKX8 364 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 NLRP9Q7RTR0 991 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 TRPV5Q9NQA5 729 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 ZNF277Q9NRM2 450 aaPredicted RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 ZNF233A6NK53 670 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 EFCAB14O75071 495 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 PALMO75781 387 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 ATP5BP06576 529 aaKnown RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 MPP2Q14168 576 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 SPRED3Q2MJR0 410 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 TUBE1Q9UJT0 475 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 KPNA4O00629 521 aaPredicted RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 BIRC5O15392 142 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 SLC9A1P19634 815 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 S100A5P33763 92 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 PASD1Q8IV76 773 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 SH2D3AQ9BRG2 576 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 CELF4Q9BZC1 486 aaKnown RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 GNL1P36915 607 aaPredicted RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 CACNB3P54284 484 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 CNPY3Q9BT09 278 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 UBA2Q9UBT2 640 aaPredicted RBP3.3□□□□□ -1.88
NEB-220ENST00000618972 AREL1O15033 823 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 SIKE1Q9BRV8 207 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 GMEB1Q9Y692 573 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 WDR44Q5JSH3 913 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 C17orf50Q8WW18 174 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms