RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 PCDHA11Q9Y5I1 949 aa9.25□□□□□ -0.93
NEK3-209ENST00000618856 MORC2Q9Y6X9 1032 aaPredicted RBP9.25□□□□□ -0.93
NEK3-209ENST00000618856 COL6A3P12111 3177 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 MICAL3Q7RTP6 2002 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 GRXCR1A8MXD5 290 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 ZBTB39O15060 712 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 MARCH6O60337 910 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 MED24O75448 989 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 ATP2A2P16615 1042 aaKnown RBP9.24□□□□□ -0.93
NEK3-209ENST00000618856 ATP2B1P20020 1258 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 RPA1P27694 616 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 PBX2P40425 430 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 RFC5P40937 340 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 TECP42680 631 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 HTRA4P83105 476 aaPredicted RBP9.24□□□□□ -0.93
NEK3-209ENST00000618856 CDC42EP1Q00587 391 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 TBC1D8BQ0IIM8 1120 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 RESTQ13127 1097 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 DRP2Q13474 957 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 GNL2Q13823 731 aaKnown RBP9.24□□□□□ -0.93
NEK3-209ENST00000618856 CTTNQ14247 550 aaKnown RBP9.24□□□□□ -0.93
NEK3-209ENST00000618856 ARL6IP4Q66PJ3 421 aaKnown RBP9.24□□□□□ -0.93
NEK3-209ENST00000618856 EFCAB12Q6NXP0 572 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 RTN4RL1Q86UN2 441 aaPredicted RBP9.24□□□□□ -0.93
NEK3-209ENST00000618856 HERC6Q8IVU3 1022 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 EXOC8Q8IYI6 725 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 TMX1Q9H3N1 280 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 ERVK-5Q9HDB9 667 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 SEPT9Q9UHD8 586 aaPredicted RBP9.24□□□□□ -0.93
NEK3-209ENST00000618856 DBR1Q9UK59 544 aaKnown RBP9.24□□□□□ -0.93
NEK3-209ENST00000618856 SPTBN5Q9NRC6 3674 aaKnown RBP9.24□□□□□ -0.93
NEK3-209ENST00000618856 ARID2Q68CP9 1835 aa9.24□□□□□ -0.93
NEK3-209ENST00000618856 DDX11L8A8MPP1 907 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 ENPP3O14638 875 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 GAS2O43903 313 aaKnown RBP9.23□□□□□ -0.93
NEK3-209ENST00000618856 GJB5O95377 273 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 GHRP10912 638 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 PDIA4P13667 645 aaKnown RBP9.23□□□□□ -0.93
NEK3-209ENST00000618856 DNAJB2P25686 324 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 TMOD1P28289 359 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 RARRES1P49788 294 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 GPC3P51654 580 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 CLCN3P51790 818 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 NPEPPSP55786 919 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 DEFB103AP81534 67 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 CYP4A11Q02928 519 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 TMEM62Q0P6H9 643 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 RAB30Q15771 203 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 ECM1Q16610 540 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 MTERF2Q49AM1 385 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 HYIQ5T013 277 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 PLA2G4FQ68DD2 849 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 MCTP1Q6DN14 999 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.23□□□□□ -0.93
NEK3-209ENST00000618856 OTUD6AQ7L8S5 288 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 LRRC71Q8N4P6 559 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 KCTD17Q8N5Z5 321 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 LINC01599Q8WXQ3 324 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 TOP1MTQ969P6 601 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 JPH2Q9BR39 696 aaPredicted RBP9.23□□□□□ -0.93
NEK3-209ENST00000618856 MMTAG2Q9BU76 263 aaKnown RBP9.23□□□□□ -0.93
NEK3-209ENST00000618856 FTHL17Q9BXU8 183 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 SEMA6BQ9H3T3 888 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 RC3H2Q9HBD1 1191 aaKnown RBP9.23□□□□□ -0.93
NEK3-209ENST00000618856 XPNPEP1Q9NQW7 623 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 MTMR10Q9NXD2 777 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 PADI3Q9ULW8 664 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 YBX2Q9Y2T7 364 aaKnown RBP9.23□□□□□ -0.93
NEK3-209ENST00000618856 NOC2LQ9Y3T9 749 aaKnown RBP9.23□□□□□ -0.93
NEK3-209ENST00000618856 STK24Q9Y6E0 443 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 GBF1Q92538 1859 aa9.23□□□□□ -0.93
NEK3-209ENST00000618856 EVPLQ92817 2033 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 EYSQ5T1H1 3165 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 ZBBXA8MT70 800 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 M0QZ92 97 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 STX6O43752 255 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 VTNP04004 478 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 DARSP14868 501 aaKnown RBP9.22□□□□□ -0.93
NEK3-209ENST00000618856 EIF4BP23588 611 aaKnown RBP9.22□□□□□ -0.93
NEK3-209ENST00000618856 CD52P31358 61 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 ARL2P36404 184 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 NLRP11P59045 1033 aaKnown RBP9.22□□□□□ -0.93
NEK3-209ENST00000618856 FAM189BP81408 668 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 POU5F1BQ06416 359 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 DSC3Q14574 896 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 PTPAQ15257 358 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 KIZQ2M2Z5 673 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 DTHD1Q6ZMT9 781 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 ZNF410Q86VK4 478 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 FAM228AQ86W67 206 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 HSCBQ8IWL3 235 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 TPH2Q8IWU9 490 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 METTL13Q8N6R0 699 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 ERMNQ8TAM6 284 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 SLC7A3Q8WY07 619 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 TIFAQ96CG3 184 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 CEP170P1Q96L14 293 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 GUCD1Q96NT3 240 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 NACC1Q96RE7 527 aa9.22□□□□□ -0.93
NEK3-209ENST00000618856 SH2D3AQ9BRG2 576 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms