RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 KIAA1257Q9ULG3 409 aa4.48□□□□□ -1.69
UBE2D3-233ENST00000618836 MSRB2Q9Y3D2 182 aa4.48□□□□□ -1.69
UBE2D3-233ENST00000618836 R3HCC1Q9Y3T6 440 aaKnown RBP4.48□□□□□ -1.69
UBE2D3-233ENST00000618836 PCDHGB7Q9Y5F8 929 aa4.48□□□□□ -1.69
UBE2D3-233ENST00000618836 SCN11AQ9UI33 1791 aa4.48□□□□□ -1.69
UBE2D3-233ENST00000618836 CCDC141Q6ZP82 1450 aa4.48□□□□□ -1.69
UBE2D3-233ENST00000618836 OVOS2A0A0G2JMS6 1433 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 MROH5Q6ZUA9 1318 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 MYO3BQ8WXR4 1341 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 ABHD14A-ACY1A0A1B0GW23 586 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 EYA2O00167 538 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 MAP3K6O95382 1288 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 CDK4P11802 303 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 HOXB1P14653 301 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 STMN1P16949 149 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 ZFXP17010 805 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 ATP2B4P23634 1241 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 ELF1P32519 619 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 ATP6V1E1P36543 226 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 PHKA1P46020 1223 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 USP4Q13107 963 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 GRM1Q13255 1194 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 SGCGQ13326 291 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 ZNF211Q13398 564 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 GALEQ14376 348 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 CEP57Q86XR8 500 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 VPS37DQ86XT2 251 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 GLYCTKQ8IVS8 523 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 TMEM57Q8N5G2 664 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 CAMKK1Q8N5S9 505 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 ANKRD53Q8N9V6 530 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 BAP1Q92560 729 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 ARL8AQ96BM9 186 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 TIFAQ96CG3 184 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 DDX11Q96FC9 970 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 MTMR9Q96QG7 549 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 FOXP3Q9BZS1 431 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 EHD1Q9H4M9 534 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 CYP4F12Q9HCS2 524 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 ABCB6Q9NP58 842 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 HPF1Q9NWY4 346 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 GPR52Q9Y2T5 361 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 GMEB1Q9Y692 573 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 OVOS2A0A0J9YW53 1432 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 OVOS2Q6IE36 1432 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 E2F8A0AVK6 867 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 YKT6O15498 198 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 SORBS3O60504 671 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 TSC22D2O75157 780 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 SCG2P13521 617 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 RPL9P32969 192 aaKnown RBP4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 ZAP70P43403 619 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 ARFIP1P53367 373 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 GUCY1B3Q02153 619 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 UBXN1Q04323 297 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 PTPN12Q05209 780 aaKnown RBP4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 TMEM62Q0P6H9 643 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 HSPA14Q0VDF9 509 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 SNX1Q13596 522 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 B4GALNT4Q76KP1 1039 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 ZNF598Q86UK7 904 aaKnown RBP4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 SULF1Q8IWU6 871 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 C7orf31Q8N865 590 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 SUPT20HQ8NEM7 779 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 NPLOC4Q8TAT6 608 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 KCTD13Q8WZ19 329 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 PPP2R3CQ969Q6 453 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 DESI2Q9BSY9 194 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 TRPV6Q9H1D0 765 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 PCDH18Q9HCL0 1135 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 MCM8Q9UJA3 840 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 SPDYE3A6NKU9 549 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 CAPN9O14815 690 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 MBD4O95243 580 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 MYCP01106 439 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 RHOXF2BP0C7M4 288 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 EPB41P11171 864 aaKnown RBP4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 CAP1Q01518 475 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 GRSF1Q12849 480 aaKnown RBP eCLIP4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 TRIM32Q13049 653 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 RAB33AQ14088 237 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 SCARB2Q14108 478 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 STK11Q15831 433 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 FBXO43Q4G163 708 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 MORN1Q5T089 497 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 OR7E24Q6IFN5 339 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 MFN1Q8IWA4 741 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 ADAMTS18Q8TE60 1221 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 DENND1AQ8TEH3 1009 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 PDLIM2Q96JY6 352 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 TUBA1CQ9BQE3 449 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 RHOXF2Q9BQY4 288 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 ADPGKQ9BRR6 497 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 OXCT2Q9BYC2 517 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 MMRN2Q9H8L6 949 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 TRPM5Q9NZQ8 1165 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 ZNF624Q9P2J8 865 aaPredicted RBP4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 EXTL2Q9UBQ6 330 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 FETUBQ9UGM5 382 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 HPCAL4Q9UM19 191 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms