RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 RABEP2Q9H5N1 569 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 LRRC4CQ9HCJ2 640 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 GDF3Q9NR23 364 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 AIPL1Q9NZN9 384 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 ADAMTS1Q9UHI8 967 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 PCDHA1Q9Y5I3 950 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.74□□□□□ -1.65
SEC22B-202ENST00000618538 SLX4Q8IY92 1834 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 IGLV3-22A0A075B6J6 115 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 A0A1W2PRG0 241 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 GOLGA6BA6NDN3 693 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 ZNF233A6NK53 670 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 UBAP1LF5GYI3 381 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 MSH4O15457 936 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 GDF11O95390 407 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 KRT14P02533 472 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 NR2F2P24468 414 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 PON1P27169 355 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 HOXA13P31271 388 aaPredicted RBP4.74□□□□□ -1.65
SEC22B-202ENST00000618538 CRKP46108 304 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 MRPL12P52815 198 aaKnown RBP4.74□□□□□ -1.65
SEC22B-202ENST00000618538 RNASE9P60153 205 aaKnown RBP4.74□□□□□ -1.65
SEC22B-202ENST00000618538 CYP4A11Q02928 519 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 EPHA7Q15375 998 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 MAP9Q49MG5 647 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 PRR16Q569H4 304 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 HSP90B2PQ58FF3 399 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 TTC19Q6DKK2 380 aaPredicted RBP4.74□□□□□ -1.65
SEC22B-202ENST00000618538 C10orf67Q8IYJ2 551 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 SEPT12Q8IYM1 358 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 CAVIN3Q969G5 261 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 SLC35C1Q96A29 364 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 BORCS6Q96GS4 357 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 ZIM3Q96PE6 472 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 NOX5Q96PH1 765 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 FIZ1Q96SL8 496 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 TSG101Q99816 390 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 TRIM34Q9BYJ4 488 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 RAB34Q9BZG1 259 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 NEUROG2Q9H2A3 272 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 DBNDD1Q9H9R9 158 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 WRAP73Q9P2S5 460 aaPredicted RBP4.74□□□□□ -1.65
SEC22B-202ENST00000618538 SWAP70Q9UH65 585 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 TMEM59LQ9UK28 342 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 HDAC9Q9UKV0 1011 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 NFU1Q9UMS0 254 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 IGSF9BQ9UPX0 1349 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 KDM3AQ9Y4C1 1321 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 BRWD3Q6RI45 1802 aa4.74□□□□□ -1.65
SEC22B-202ENST00000618538 SFI1A8K8P3 1242 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 TGFB1I1O43294 461 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 RAD51CO43502 376 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 RAD21O60216 631 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 HEXIM1O94992 359 aaKnown RBP4.73□□□□□ -1.65
SEC22B-202ENST00000618538 NDUFB10O96000 172 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 UCHL3P15374 230 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 SREBF1P36956 1147 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 MMP14P50281 582 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 IRAK1P51617 712 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 USP11P51784 963 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 EPHB4P54760 987 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 JAM2P57087 298 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 ERVK-9P63128 1117 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 ADAM9Q13443 819 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 COG2Q14746 738 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 KIAA0753Q2KHM9 967 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 EDRF1Q3B7T1 1238 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 USH1GQ495M9 461 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 SLC9C1Q4G0N8 1177 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 DNAJC21Q5F1R6 531 aaKnown RBP4.73□□□□□ -1.65
SEC22B-202ENST00000618538 C8orf74Q6P047 294 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 HHIPL2Q6UWX4 724 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 ARHGAP27Q6ZUM4 889 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 KIAA0825Q8IV33 1275 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 KSR1Q8IVT5 923 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 CCDC65Q8IXS2 484 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 IQCKQ8N0W5 287 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 RNF10Q8N5U6 811 aaKnown RBP4.73□□□□□ -1.65
SEC22B-202ENST00000618538 MKL1Q969V6 931 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 ALS2CR12Q96Q35 445 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 KRT12Q99456 494 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 SYT11Q9BT88 431 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 WDR18Q9BV38 432 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 NT5C3AQ9H0P0 336 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 ZHX3Q9H4I2 956 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 RGL1Q9NZL6 768 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.73□□□□□ -1.65
SEC22B-202ENST00000618538 RSPH14Q9UHP6 348 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 TRAF3IP3Q9Y228 551 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 SUGT1Q9Y2Z0 365 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 PITPNM2Q9BZ72 1349 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 GOLGA6CA6NDK9 693 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 F5H6K3 240 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 DDX3XO00571 662 aaKnown RBP eCLIP4.73□□□□□ -1.65
SEC22B-202ENST00000618538 CLIC2O15247 247 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 ZBTB24O43167 697 aaPredicted RBP4.73□□□□□ -1.65
SEC22B-202ENST00000618538 LRRN2O75325 713 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 PPFIA4O75335 1185 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 FGFR1OPO95684 399 aaKnown RBP4.73□□□□□ -1.65
SEC22B-202ENST00000618538 GOLGA6DP0CG33 693 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms