RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 BMT2Q1RMZ1 405 aa12.4□□□□□ -0.42
CPEB1-216ENST00000618449 MIIPQ5JXC2 388 aa12.4□□□□□ -0.42
CPEB1-216ENST00000618449 SPRYD7Q5W111 196 aa12.4□□□□□ -0.42
CPEB1-216ENST00000618449 CYFIP1Q7L576 1253 aa12.4□□□□□ -0.42
CPEB1-216ENST00000618449 NOC4LQ9BVI4 516 aaKnown RBP12.4□□□□□ -0.42
CPEB1-216ENST00000618449 EFCC1Q9HA90 598 aa12.4□□□□□ -0.42
CPEB1-216ENST00000618449 SLC45A1Q9Y2W3 748 aa12.4□□□□□ -0.42
CPEB1-216ENST00000618449 BACH1O14867 736 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 KIF5CO60282 957 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 ZNF862O60290 1169 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 USO1O60763 962 aaKnown RBP12.39□□□□□ -0.43
CPEB1-216ENST00000618449 ITGBL1O95965 494 aaPredicted RBP12.39□□□□□ -0.43
CPEB1-216ENST00000618449 PSAPP07602 524 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 KCNA1Q09470 495 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 PLA2G4FQ68DD2 849 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 SWSAP1Q6NVH7 229 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 ABHD15Q6UXT9 468 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 ANO5Q75V66 913 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 EEPD1Q7L9B9 569 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 CCDC60Q8IWA6 550 aaPredicted RBP12.39□□□□□ -0.43
CPEB1-216ENST00000618449 ANKRD13CQ8N6S4 541 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 GPRC5AQ8NFJ5 357 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 GTF3C2Q8WUA4 911 aaPredicted RBP12.39□□□□□ -0.43
CPEB1-216ENST00000618449 CCDC43Q96MW1 224 aaKnown RBP12.39□□□□□ -0.43
CPEB1-216ENST00000618449 DNAJC7Q99615 494 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 IRX2Q9BZI1 471 aaPredicted RBP12.39□□□□□ -0.43
CPEB1-216ENST00000618449 CAPN11Q9UMQ6 739 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 LUC7L2Q9Y383 392 aaKnown RBP12.39□□□□□ -0.43
CPEB1-216ENST00000618449 ZBTB48P10074 688 aaPredicted RBP12.39□□□□□ -0.43
CPEB1-216ENST00000618449 NPEPPSP55786 919 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 EDRF1Q3B7T1 1238 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 ARHGAP29Q52LW3 1261 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 ZC2HC1CQ53FD0 456 aaPredicted RBP12.39□□□□□ -0.43
CPEB1-216ENST00000618449 ODR4Q5SWX8 454 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 PPP4R3CPQ6ZMV5 832 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 ANKRD23Q86SG2 305 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 FAM178BQ8IXR5 827 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 SHCBP1Q8NEM2 672 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 OR8K1Q8NGG5 319 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 SEL1LQ9UBV2 794 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 TRAF3IP3Q9Y228 551 aa12.39□□□□□ -0.43
CPEB1-216ENST00000618449 SPDYE4A6NLX3 237 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 EFCAB8A8MWE9 144 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 SOCS7O14512 581 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 H2AFXP16104 143 aaPredicted RBP12.38□□□□□ -0.43
CPEB1-216ENST00000618449 UBA1P22314 1058 aaKnown RBP12.38□□□□□ -0.43
CPEB1-216ENST00000618449 PPP2R3AQ06190 1150 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 ADAM9Q13443 819 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 XKR9Q5GH70 373 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 ZNF720Q7Z2F6 126 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 UBXN4Q92575 508 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 ATP6V0A1Q93050 837 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 CEP63Q96MT8 703 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 PTPN18Q99952 460 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 TTYH3Q9C0H2 523 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 ANKEF1Q9NU02 776 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 PDXKO00764 312 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 EIF3DO15371 548 aaKnown RBP eCLIP12.38□□□□□ -0.43
CPEB1-216ENST00000618449 STBD1O95210 358 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 CBX1P83916 185 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 TBC1D8BQ0IIM8 1120 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 VWA3BQ502W6 1294 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 MIS18BP1Q6P0N0 1132 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 ZC3H3Q8IXZ2 948 aaKnown RBP12.38□□□□□ -0.43
CPEB1-216ENST00000618449 CHP1Q99653 195 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 TMEM51Q9NW97 253 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 WDR81Q562E7 1941 aa12.38□□□□□ -0.43
CPEB1-216ENST00000618449 LRRC37A2A6NM11 1700 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 SUPT20HL2P0C7V6 817 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 NR2F2P24468 414 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 HUNKP57058 714 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 MAN2A1Q16706 1144 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 TSR1Q2NL82 804 aaKnown RBP12.37□□□□□ -0.43
CPEB1-216ENST00000618449 ZNF569Q5MCW4 686 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 KSR1Q8IVT5 923 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 MPHOSPH6Q99547 160 aaKnown RBP12.37□□□□□ -0.43
CPEB1-216ENST00000618449 NUP58Q9BVL2 599 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 IKZF4Q9H2S9 585 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 NDST4Q9H3R1 872 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 TYW1Q9NV66 732 aaKnown RBP12.37□□□□□ -0.43
CPEB1-216ENST00000618449 DDX41Q9UJV9 622 aaKnown RBP12.37□□□□□ -0.43
CPEB1-216ENST00000618449 SYNGAP1Q96PV0 1343 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 ZMYM2Q9UBW7 1377 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 TGFB1I1O43294 461 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 DKC1O60832 514 aaKnown RBP eCLIP12.37□□□□□ -0.43
CPEB1-216ENST00000618449 FARP2O94887 1054 aaPredicted RBP12.37□□□□□ -0.43
CPEB1-216ENST00000618449 NDUFA10O95299 355 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 ATG7O95352 703 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 TRIM21P19474 475 aaKnown RBP12.37□□□□□ -0.43
CPEB1-216ENST00000618449 ARHGAP25P42331 645 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 CCNA1P78396 465 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 CCDC40Q4G0X9 1142 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 CHADLQ6NUI6 762 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 OTUD6AQ7L8S5 288 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 RETREG2Q8NC44 543 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 ERGIC2Q96RQ1 377 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 GPRC5CQ9NQ84 441 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 OGFRQ9NZT2 677 aa12.37□□□□□ -0.43
CPEB1-216ENST00000618449 LARSQ9P2J5 1176 aaKnown RBP12.37□□□□□ -0.43
CPEB1-216ENST00000618449 MYH11P35749 1972 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms