RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 PDCD7Q8N8D1 485 aaKnown RBP13.21□□□□□ -0.29
MATR3-227ENST00000618441 FGFR1OPO95684 399 aaKnown RBP13.21□□□□□ -0.29
MATR3-227ENST00000618441 ADARP55265 1226 aaKnown RBP13.21□□□□□ -0.29
MATR3-227ENST00000618441 ZNF658Q5TYW1 1059 aaPredicted RBP13.21□□□□□ -0.29
MATR3-227ENST00000618441 PEX26Q7Z412 305 aa13.21□□□□□ -0.29
MATR3-227ENST00000618441 CCDC65Q8IXS2 484 aa13.21□□□□□ -0.29
MATR3-227ENST00000618441 AGBL1Q96MI9 1066 aa13.21□□□□□ -0.29
MATR3-227ENST00000618441 DUSP9Q99956 384 aaKnown RBP13.21□□□□□ -0.29
MATR3-227ENST00000618441 TSKSQ9UJT2 592 aa13.21□□□□□ -0.29
MATR3-227ENST00000618441 PRR12Q9ULL5 1215 aa13.21□□□□□ -0.29
MATR3-227ENST00000618441 TSC22D4Q9Y3Q8 395 aa13.21□□□□□ -0.29
MATR3-227ENST00000618441 COMMD10Q9Y6G5 202 aa13.21□□□□□ -0.29
MATR3-227ENST00000618441 ARHGEF10O15013 1369 aa13.21□□□□□ -0.29
MATR3-227ENST00000618441 TMEM120BA0PK00 339 aa13.21□□□□□ -0.3
MATR3-227ENST00000618441 CTDSPL2Q05D32 466 aa13.21□□□□□ -0.3
MATR3-227ENST00000618441 BNIP1Q12981 228 aa13.21□□□□□ -0.3
MATR3-227ENST00000618441 SLC9C1Q4G0N8 1177 aa13.21□□□□□ -0.3
MATR3-227ENST00000618441 PIGWQ7Z7B1 504 aa13.21□□□□□ -0.3
MATR3-227ENST00000618441 C14orf80Q86SX3 495 aa13.21□□□□□ -0.3
MATR3-227ENST00000618441 GLG1Q92896 1179 aa13.21□□□□□ -0.3
MATR3-227ENST00000618441 PBKQ96KB5 322 aa13.21□□□□□ -0.3
MATR3-227ENST00000618441 TRAPPC9Q96Q05 1148 aa13.21□□□□□ -0.3
MATR3-227ENST00000618441 NKIRAS1Q9NYS0 192 aa13.21□□□□□ -0.3
MATR3-227ENST00000618441 DOLKQ9UPQ8 538 aa13.21□□□□□ -0.3
MATR3-227ENST00000618441 LRRC42Q9Y546 428 aa13.21□□□□□ -0.3
MATR3-227ENST00000618441 FAM196BA6NMK8 535 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 GPAA1O43292 621 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 UBA7P41226 1012 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 PMS2P54278 862 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 TRIM67Q6ZTA4 783 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 TMC3Q7Z5M5 1100 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 TMCO5AQ8N6Q1 288 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 LRRC37BQ96QE4 947 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 PTPN22Q9Y2R2 807 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 A0A087WZG4 1122 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 SRRM3A6NNA2 597 aaPredicted RBP13.2□□□□□ -0.3
MATR3-227ENST00000618441 DKC1O60832 514 aaKnown RBP eCLIP13.2□□□□□ -0.3
MATR3-227ENST00000618441 E2F6O75461 281 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 TJP3O95049 919 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 GSTA2P09210 222 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 CERKLQ49MI3 558 aaPredicted RBP13.2□□□□□ -0.3
MATR3-227ENST00000618441 VWA3BQ502W6 1294 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 PIK3AP1Q6ZUJ8 805 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 MB21D2Q8IYB1 491 aaPredicted RBP13.2□□□□□ -0.3
MATR3-227ENST00000618441 RUBCNQ92622 972 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 ZNF653Q96CK0 615 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 MKNK1Q9BUB5 465 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 PUS7LQ9H0K6 701 aaKnown RBP13.2□□□□□ -0.3
MATR3-227ENST00000618441 MYLK2Q9H1R3 596 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 TAOK3Q9H2K8 898 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 ARHGEF3Q9NR81 526 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 NOC2LQ9Y3T9 749 aaKnown RBP13.2□□□□□ -0.3
MATR3-227ENST00000618441 XDHP47989 1333 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 ZCWPW2Q504Y3 356 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 OR52E8Q6IFG1 317 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 ZNF790Q6PG37 636 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 TBC1D10AQ9BXI6 508 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 AGXT2Q9BYV1 514 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 NACA2Q9H009 215 aa13.2□□□□□ -0.3
MATR3-227ENST00000618441 PP2D1A8MPX8 630 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 UBAP1LF5GYI3 381 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 PGRMC1O00264 195 aaKnown RBP13.19□□□□□ -0.3
MATR3-227ENST00000618441 GTPBP6O43824 516 aaPredicted RBP13.19□□□□□ -0.3
MATR3-227ENST00000618441 RTP1P59025 263 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 POLR2FP61218 127 aaKnown RBP13.19□□□□□ -0.3
MATR3-227ENST00000618441 ZNF211Q13398 564 aaPredicted RBP13.19□□□□□ -0.3
MATR3-227ENST00000618441 IRF2BP1Q8IU81 584 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 WDR75Q8IWA0 830 aaKnown RBP13.19□□□□□ -0.3
MATR3-227ENST00000618441 DENND2DQ9H6A0 471 aaPredicted RBP13.19□□□□□ -0.3
MATR3-227ENST00000618441 DCTN4Q9UJW0 460 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 PPP1R9AQ9ULJ8 1098 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 TMCO1Q9UM00 188 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 GSTTP1A0A1W2PQM5 241 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 H0YGN5 161 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 PGM3O95394 542 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 NFKBIAP25963 317 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 KHDC1Q4VXA5 237 aaKnown RBP13.19□□□□□ -0.3
MATR3-227ENST00000618441 ZNF394Q53GI3 561 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 SCUBE1Q8IWY4 988 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 CFAP61Q8NHU2 1237 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 KAZALD1Q96I82 304 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 PLVAPQ9BX97 442 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 ZNF510Q9Y2H8 683 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 NFS1Q9Y697 457 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 LMTK3Q96Q04 1460 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 WDR91A4D1P6 747 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 PALM3A6NDB9 673 aaPredicted RBP13.19□□□□□ -0.3
MATR3-227ENST00000618441 NKRFO15226 690 aaKnown RBP eCLIP13.19□□□□□ -0.3
MATR3-227ENST00000618441 SRGNP10124 158 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 GM2AP17900 193 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 FECHP22830 423 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 EEF1GP26641 437 aaKnown RBP13.19□□□□□ -0.3
MATR3-227ENST00000618441 SLC4A8Q2Y0W8 1093 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 TTC38Q5R3I4 469 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 JDP2Q8WYK2 163 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 C8orf37Q96NL8 207 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 NAP1L3Q99457 506 aaPredicted RBP13.19□□□□□ -0.3
MATR3-227ENST00000618441 KIAA1683Q9H0B3 1180 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 NT5C3AQ9H0P0 336 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 SEMA4AQ9H3S1 761 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms