RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 SH3GL1Q99961 368 aa13.21□□□□□ -0.29
SRRT-216ENST00000618262 CYP39A1Q9NYL5 469 aa13.21□□□□□ -0.29
SRRT-216ENST00000618262 ZMAT5Q9UDW3 170 aaKnown RBP13.21□□□□□ -0.29
SRRT-216ENST00000618262 SPO11Q9Y5K1 396 aa13.21□□□□□ -0.29
SRRT-216ENST00000618262 TLR2O60603 784 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 DMPKQ09013 629 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 KCTD2Q14681 263 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 NONOQ15233 471 aaKnown RBP eCLIP13.2□□□□□ -0.3
SRRT-216ENST00000618262 PRAMEF19Q5SWL8 479 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 CEP135Q66GS9 1140 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 ARHGAP22Q7Z5H3 698 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 POTEDQ86YR6 584 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 MMP19Q99542 508 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 OSBPL10Q9BXB5 764 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 TMEM60Q9H2L4 133 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 ZFYVE28Q9HCC9 887 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 CHMP2AO43633 222 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 HSPA6P17066 643 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 HOXD11P31277 338 aaPredicted RBP13.2□□□□□ -0.3
SRRT-216ENST00000618262 CLK1P49759 484 aaKnown RBP13.2□□□□□ -0.3
SRRT-216ENST00000618262 NAA25Q14CX7 972 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 STK38Q15208 465 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 LMBRD2Q68DH5 695 aaPredicted RBP13.2□□□□□ -0.3
SRRT-216ENST00000618262 DPP9Q86TI2 863 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 RNF186Q9NXI6 227 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 RABGAP1Q9Y3P9 1069 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 IVNS1ABPQ9Y6Y0 642 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 ASTN1O14525 1302 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 LINC00854A0A1B0GVQ3 168 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 PP2D1A8MPX8 630 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 FAM86B1E9PN63 330 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 EDIL3O43854 480 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 FAM86B2P0C5J1 330 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 ADORA2AP29274 412 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 TXKP42681 527 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 LRRC23Q53EV4 343 aaPredicted RBP13.2□□□□□ -0.3
SRRT-216ENST00000618262 TTC38Q5R3I4 469 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 DCLK2Q8N568 766 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 PPP1R13LQ8WUF5 828 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 CTNNBL1Q8WYA6 563 aaPredicted RBP13.2□□□□□ -0.3
SRRT-216ENST00000618262 TNFRSF25Q93038 417 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 WDR11Q9BZH6 1224 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 FOXP1Q9H334 677 aaPredicted RBP13.2□□□□□ -0.3
SRRT-216ENST00000618262 TELO2Q9Y4R8 837 aa13.2□□□□□ -0.3
SRRT-216ENST00000618262 TMEM110-MUSTN1A8MSY1 372 aa13.19□□□□□ -0.3
SRRT-216ENST00000618262 POTEB2H3BUK9 544 aa13.19□□□□□ -0.3
SRRT-216ENST00000618262 LIG3P49916 1009 aa13.19□□□□□ -0.3
SRRT-216ENST00000618262 HDAC4P56524 1084 aa13.19□□□□□ -0.3
SRRT-216ENST00000618262 CHMP4BP1P59074 171 aa13.19□□□□□ -0.3
SRRT-216ENST00000618262 ARHGAP4P98171 946 aa13.19□□□□□ -0.3
SRRT-216ENST00000618262 PTGDRQ13258 359 aa13.19□□□□□ -0.3
SRRT-216ENST00000618262 CCL14Q16627 93 aa13.19□□□□□ -0.3
SRRT-216ENST00000618262 GNPTABQ3T906 1256 aa13.19□□□□□ -0.3
SRRT-216ENST00000618262 Q4G0T1 1027 aa13.19□□□□□ -0.3
SRRT-216ENST00000618262 WLSQ5T9L3 541 aa13.19□□□□□ -0.3
SRRT-216ENST00000618262 GPR142Q7Z601 462 aa13.19□□□□□ -0.3
SRRT-216ENST00000618262 DNAAF2Q9NVR5 837 aaKnown RBP13.19□□□□□ -0.3
SRRT-216ENST00000618262 FRMD3A2A2Y4 597 aa13.19□□□□□ -0.3
SRRT-216ENST00000618262 VWA3AA6NCI4 1184 aa13.19□□□□□ -0.3
SRRT-216ENST00000618262 M0R2N6 131 aa13.19□□□□□ -0.3
SRRT-216ENST00000618262 PLA2G6O60733 806 aa13.19□□□□□ -0.3
SRRT-216ENST00000618262 FCER1AP12319 257 aa13.19□□□□□ -0.3
SRRT-216ENST00000618262 MFN1Q8IWA4 741 aa13.19□□□□□ -0.3
SRRT-216ENST00000618262 SAMD14Q8IZD0 417 aaPredicted RBP13.19□□□□□ -0.3
SRRT-216ENST00000618262 DOCK3Q8IZD9 2030 aa13.18□□□□□ -0.3
SRRT-216ENST00000618262 TNPO2O14787 897 aaKnown RBP13.18□□□□□ -0.3
SRRT-216ENST00000618262 COBLO75128 1261 aa13.18□□□□□ -0.3
SRRT-216ENST00000618262 MBD3O95983 291 aa13.18□□□□□ -0.3
SRRT-216ENST00000618262 PSMC4P43686 418 aa13.18□□□□□ -0.3
SRRT-216ENST00000618262 SLC8A3P57103 927 aa13.18□□□□□ -0.3
SRRT-216ENST00000618262 KRT85P78386 507 aa13.18□□□□□ -0.3
SRRT-216ENST00000618262 FKBP15Q5T1M5 1219 aa13.18□□□□□ -0.3
SRRT-216ENST00000618262 USP49Q70CQ1 688 aa13.18□□□□□ -0.3
SRRT-216ENST00000618262 RIOX2Q8IUF8 465 aa13.18□□□□□ -0.3
SRRT-216ENST00000618262 SLC7A5P1Q8MH63 180 aa13.18□□□□□ -0.3
SRRT-216ENST00000618262 SH3GLB2Q9NR46 395 aa13.18□□□□□ -0.3
SRRT-216ENST00000618262 CAVIN2O95810 425 aa13.18□□□□□ -0.3
SRRT-216ENST00000618262 NEK8Q86SG6 692 aa13.18□□□□□ -0.3
SRRT-216ENST00000618262 TMCO5AQ8N6Q1 288 aa13.18□□□□□ -0.3
SRRT-216ENST00000618262 CD99L2Q8TCZ2 262 aa13.18□□□□□ -0.3
SRRT-216ENST00000618262 PARD6BQ9BYG5 372 aa13.18□□□□□ -0.3
SRRT-216ENST00000618262 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.18□□□□□ -0.31e-8■■■■□ 22
SRRT-216ENST00000618262 RLFQ13129 1914 aa13.18□□□□□ -0.3
SRRT-216ENST00000618262 PABPN1LA6NDY0 278 aaKnown RBP13.17□□□□□ -0.3
SRRT-216ENST00000618262 TECP42680 631 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 TM4SF4P48230 202 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 KIF11P52732 1056 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 ZNF131P52739 623 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 KCNB1Q14721 858 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 FBXO16Q8IX29 292 aaPredicted RBP13.17□□□□□ -0.3
SRRT-216ENST00000618262 ANKK1Q8NFD2 765 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 BICD2Q8TD16 824 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 WHAMMQ8TF30 809 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 LENG1Q96BZ8 264 aaPredicted RBP13.17□□□□□ -0.3
SRRT-216ENST00000618262 CCDC68Q9H2F9 335 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 GABRQQ9UN88 632 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 TCHHQ07283 1943 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 CA12O43570 354 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 ARP10275 920 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 CLK2P49760 499 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms