RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 CXCL9Q07325 125 aa5.82□□□□□ -1.48
CUL3-216ENST00000617432 GCKRQ14397 625 aa5.82□□□□□ -1.48
CUL3-216ENST00000617432 SMN1Q16637 294 aaKnown RBP5.82□□□□□ -1.48
CUL3-216ENST00000617432 NIM1KQ8IY84 436 aa5.82□□□□□ -1.48
CUL3-216ENST00000617432 SMC1BQ8NDV3 1235 aa5.82□□□□□ -1.48
CUL3-216ENST00000617432 DNAAF4Q8WXU2 420 aa5.82□□□□□ -1.48
CUL3-216ENST00000617432 KLC2Q9H0B6 622 aa5.82□□□□□ -1.48
CUL3-216ENST00000617432 ANTXR1Q9H6X2 564 aa5.82□□□□□ -1.48
CUL3-216ENST00000617432 SCN4AP35499 1836 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 CDHR2Q9BYE9 1310 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 MYH3P11055 1940 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 A0A1W2PQJ5 194 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 TRAF5O00463 557 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 BBOX1O75936 387 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 UBOX5O94941 541 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 GMPSP49915 693 aaPredicted RBP5.81□□□□□ -1.48
CUL3-216ENST00000617432 EIF6P56537 245 aaKnown RBP5.81□□□□□ -1.48
CUL3-216ENST00000617432 RPS8P62241 208 aaKnown RBP5.81□□□□□ -1.48
CUL3-216ENST00000617432 SLFN5Q08AF3 891 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 FSTL1Q12841 308 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 BEND3Q5T5X7 828 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 MEI1Q5TIA1 1274 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 HLA-DQA1Q5Y7H0 255 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 BORAQ6PGQ7 559 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 LIMS2Q7Z4I7 341 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 GPC2Q8N158 579 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 TTLL11Q8NHH1 800 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 TBC1D16Q8TBP0 767 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 JDP2Q8WYK2 163 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 MXD3Q9BW11 206 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 HACL1Q9UJ83 578 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 ING1Q9UK53 422 aaPredicted RBP5.81□□□□□ -1.48
CUL3-216ENST00000617432 TNNQ9UQP3 1299 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 IVNS1ABPQ9Y6Y0 642 aa5.81□□□□□ -1.48
CUL3-216ENST00000617432 ASTN2O75129 1339 aaPredicted RBP5.8□□□□□ -1.48
CUL3-216ENST00000617432 PASKQ96RG2 1323 aa5.8□□□□□ -1.48
CUL3-216ENST00000617432 FAM221AA4D161 298 aa5.8□□□□□ -1.48
CUL3-216ENST00000617432 PSMD14O00487 310 aa5.8□□□□□ -1.48
CUL3-216ENST00000617432 ECE2O60344 883 aa5.8□□□□□ -1.48
CUL3-216ENST00000617432 UFL1O94874 794 aa5.8□□□□□ -1.48
CUL3-216ENST00000617432 VAV1P15498 845 aa5.8□□□□□ -1.48
CUL3-216ENST00000617432 CCDC152Q4G0S7 254 aa5.8□□□□□ -1.48
CUL3-216ENST00000617432 BICRALQ6AI39 1079 aa5.8□□□□□ -1.48
CUL3-216ENST00000617432 SLC4A10Q6U841 1118 aa5.8□□□□□ -1.48
CUL3-216ENST00000617432 SSH1Q8WYL5 1049 aa5.8□□□□□ -1.48
CUL3-216ENST00000617432 ALG3Q92685 438 aa5.8□□□□□ -1.48
CUL3-216ENST00000617432 KAZALD1Q96I82 304 aa5.8□□□□□ -1.48
CUL3-216ENST00000617432 SUCLG2Q96I99 432 aa5.8□□□□□ -1.48
CUL3-216ENST00000617432 DUSP9Q99956 384 aaKnown RBP5.8□□□□□ -1.48
CUL3-216ENST00000617432 MYH16Q9H6N6 1097 aa5.8□□□□□ -1.48
CUL3-216ENST00000617432 PDLIM7Q9NR12 457 aa5.8□□□□□ -1.48
CUL3-216ENST00000617432 AP5S1Q9NUS5 200 aa5.8□□□□□ -1.48
CUL3-216ENST00000617432 DBR1Q9UK59 544 aaKnown RBP5.8□□□□□ -1.48
CUL3-216ENST00000617432 ZNRF3Q9ULT6 936 aa5.8□□□□□ -1.48
CUL3-216ENST00000617432 MINPP1Q9UNW1 487 aa5.8□□□□□ -1.48
CUL3-216ENST00000617432 SCAF8Q9UPN6 1271 aaKnown RBP5.8□□□□□ -1.48
CUL3-216ENST00000617432 IQCA1LA6NCM1 817 aa5.79□□□□□ -1.48
CUL3-216ENST00000617432 DNAJA2O60884 412 aa5.79□□□□□ -1.48
CUL3-216ENST00000617432 RAD51AP2Q09MP3 1159 aa5.79□□□□□ -1.48
CUL3-216ENST00000617432 NEXNQ0ZGT2 675 aa5.79□□□□□ -1.48
CUL3-216ENST00000617432 BNC2Q6ZN30 1099 aaPredicted RBP5.79□□□□□ -1.48
CUL3-216ENST00000617432 FAM124AQ86V42 546 aa5.79□□□□□ -1.48
CUL3-216ENST00000617432 ANKRD18AQ8IVF6 992 aa5.79□□□□□ -1.48
CUL3-216ENST00000617432 LINS1Q8NG48 757 aa5.79□□□□□ -1.48
CUL3-216ENST00000617432 NOX5Q96PH1 765 aa5.79□□□□□ -1.48
CUL3-216ENST00000617432 GPRC5DQ9NZD1 345 aa5.79□□□□□ -1.48
CUL3-216ENST00000617432 CCER2I3L3R5 266 aa5.78□□□□□ -1.48
CUL3-216ENST00000617432 TAF5LO75529 589 aa5.78□□□□□ -1.48
CUL3-216ENST00000617432 CSF1RP07333 972 aa5.78□□□□□ -1.48
CUL3-216ENST00000617432 NBPF7P0C2Y1 421 aaPredicted RBP5.78□□□□□ -1.48
CUL3-216ENST00000617432 INHBEP58166 350 aa5.78□□□□□ -1.48
CUL3-216ENST00000617432 TAF1CQ15572 869 aaPredicted RBP5.78□□□□□ -1.48
CUL3-216ENST00000617432 JAMLQ86YT9 394 aa5.78□□□□□ -1.48
CUL3-216ENST00000617432 TRMT2AQ8IZ69 625 aaKnown RBP5.78□□□□□ -1.48
CUL3-216ENST00000617432 CNTROBQ8N137 903 aa5.78□□□□□ -1.48
CUL3-216ENST00000617432 PHC3Q8NDX5 983 aa5.78□□□□□ -1.48
CUL3-216ENST00000617432 SUPT20HQ8NEM7 779 aa5.78□□□□□ -1.48
CUL3-216ENST00000617432 GATAD2BQ8WXI9 593 aa5.78□□□□□ -1.48
CUL3-216ENST00000617432 CPA5Q8WXQ8 436 aa5.78□□□□□ -1.48
CUL3-216ENST00000617432 PLA2G12BQ9BX93 195 aa5.78□□□□□ -1.48
CUL3-216ENST00000617432 GLIS2Q9BZE0 524 aaPredicted RBP5.78□□□□□ -1.48
CUL3-216ENST00000617432 PUS3Q9BZE2 481 aaKnown RBP5.78□□□□□ -1.48
CUL3-216ENST00000617432 RNF19AQ9NV58 838 aa5.78□□□□□ -1.48
CUL3-216ENST00000617432 ADM5C9JUS6 153 aa5.77□□□□□ -1.49
CUL3-216ENST00000617432 E9PSI1 815 aa5.77□□□□□ -1.49
CUL3-216ENST00000617432 GRM8O00222 908 aa5.77□□□□□ -1.49
CUL3-216ENST00000617432 SMARCA5O60264 1052 aaPredicted RBP5.77□□□□□ -1.49
CUL3-216ENST00000617432 CAMK2GQ13555 558 aaPredicted RBP5.77□□□□□ -1.49
CUL3-216ENST00000617432 FAM26FQ5R3K3 315 aa5.77□□□□□ -1.49
CUL3-216ENST00000617432 LMBR1LQ6UX01 489 aa5.77□□□□□ -1.49
CUL3-216ENST00000617432 TMC4Q7Z404 712 aa5.77□□□□□ -1.49
CUL3-216ENST00000617432 ANKRD44Q8N8A2 993 aa5.77□□□□□ -1.49
CUL3-216ENST00000617432 SMARCC2Q8TAQ2 1214 aa5.77□□□□□ -1.49
CUL3-216ENST00000617432 KLHDC4Q8TBB5 520 aa5.77□□□□□ -1.49
CUL3-216ENST00000617432 NOC4LQ9BVI4 516 aaKnown RBP5.77□□□□□ -1.49
CUL3-216ENST00000617432 TMX4Q9H1E5 349 aaPredicted RBP5.77□□□□□ -1.49
CUL3-216ENST00000617432 CNOT7Q9UIV1 285 aaKnown RBP5.77□□□□□ -1.49
CUL3-216ENST00000617432 POLR3KQ9Y2Y1 108 aaPredicted RBP5.77□□□□□ -1.49
CUL3-216ENST00000617432 PCDHAC2Q9Y5I4 1007 aa5.77□□□□□ -1.49
CUL3-216ENST00000617432 PSME4Q14997 1843 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms