RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 NKX1-1Q15270 411 aaPredicted RBP20.05■□□□□ 0.8
CDH23-212ENST00000616684 SF3B3Q15393 1217 aaKnown RBP20.05■□□□□ 0.8
CDH23-212ENST00000616684 SNCBQ16143 134 aa20.05■□□□□ 0.8
CDH23-212ENST00000616684 RC3H1Q5TC82 1133 aaKnown RBP20.05■□□□□ 0.8
CDH23-212ENST00000616684 NFRKBQ6P4R8 1299 aa20.05■□□□□ 0.8
CDH23-212ENST00000616684 RSPH3Q86UC2 560 aa20.05■□□□□ 0.8
CDH23-212ENST00000616684 SMYD2Q9NRG4 433 aa20.05■□□□□ 0.8
CDH23-212ENST00000616684 HDAC6Q9UBN7 1215 aa20.05■□□□□ 0.8
CDH23-212ENST00000616684 PLAAQ9Y263 795 aa20.05■□□□□ 0.8
CDH23-212ENST00000616684 SYNGAP1Q96PV0 1343 aa20.04■□□□□ 0.8
CDH23-212ENST00000616684 IPO5O00410 1097 aaKnown RBP20.04■□□□□ 0.8
CDH23-212ENST00000616684 P4HBP07237 508 aaKnown RBP20.04■□□□□ 0.8
CDH23-212ENST00000616684 QARSP47897 775 aaKnown RBP20.04■□□□□ 0.8
CDH23-212ENST00000616684 ZNF512BQ96KM6 892 aaPredicted RBP20.04■□□□□ 0.8
CDH23-212ENST00000616684 OSBPL9Q96SU4 736 aa20.04■□□□□ 0.8
CDH23-212ENST00000616684 ATP6V0A4Q9HBG4 840 aa20.04■□□□□ 0.8
CDH23-212ENST00000616684 CPS1P31327 1500 aa20.04■□□□□ 0.8
CDH23-212ENST00000616684 C1orf167Q5SNV9 1468 aa20.04■□□□□ 0.8
CDH23-212ENST00000616684 A0A087WUV0 522 aaPredicted RBP20.04■□□□□ 0.8
CDH23-212ENST00000616684 CLDN3O15551 220 aa20.04■□□□□ 0.8
CDH23-212ENST00000616684 GPC4O75487 556 aa20.04■□□□□ 0.8
CDH23-212ENST00000616684 C6orf118Q5T5N4 469 aa20.04■□□□□ 0.8
CDH23-212ENST00000616684 ANKRD40Q6AI12 368 aa20.04■□□□□ 0.8
CDH23-212ENST00000616684 SMIM5Q71RC9 77 aa20.04■□□□□ 0.8
CDH23-212ENST00000616684 DIS3Q9Y2L1 958 aaKnown RBP20.04■□□□□ 0.8
CDH23-212ENST00000616684 ASPHQ12797 758 aa20.04■□□□□ 0.8
CDH23-212ENST00000616684 ZNF667Q5HYK9 610 aa20.04■□□□□ 0.8
CDH23-212ENST00000616684 SCYL3Q8IZE3 742 aa20.04■□□□□ 0.8
CDH23-212ENST00000616684 EVI5O60447 810 aa20.04■□□□□ 0.8
CDH23-212ENST00000616684 CA4P22748 312 aa20.04■□□□□ 0.8
CDH23-212ENST00000616684 TRIM42Q8IWZ5 723 aa20.04■□□□□ 0.8
CDH23-212ENST00000616684 KIAA1586Q9HCI6 787 aa20.04■□□□□ 0.8
CDH23-212ENST00000616684 RNF146Q9NTX7 359 aa20.04■□□□□ 0.8
CDH23-212ENST00000616684 NCK2O43639 380 aa20.03■□□□□ 0.8
CDH23-212ENST00000616684 FDPSP14324 419 aaKnown RBP20.03■□□□□ 0.8
CDH23-212ENST00000616684 IREB2P48200 963 aaKnown RBP20.03■□□□□ 0.8
CDH23-212ENST00000616684 RCN2Q14257 317 aa20.03■□□□□ 0.8
CDH23-212ENST00000616684 DRAP1Q14919 205 aaPredicted RBP20.03■□□□□ 0.8
CDH23-212ENST00000616684 USP49Q70CQ1 688 aa20.03■□□□□ 0.8
CDH23-212ENST00000616684 RAPH1Q70E73 1250 aa20.03■□□□□ 0.8
CDH23-212ENST00000616684 WDR24Q96S15 920 aa20.03■□□□□ 0.8
CDH23-212ENST00000616684 NGRNQ9NPE2 291 aaKnown RBP20.03■□□□□ 0.8
CDH23-212ENST00000616684 DENND3A2RUS2 1198 aa20.03■□□□□ 0.8
CDH23-212ENST00000616684 FMR1Q06787 632 aaKnown RBP eCLIP20.03■□□□□ 0.8
CDH23-212ENST00000616684 ADCY2Q08462 1091 aa20.03■□□□□ 0.8
CDH23-212ENST00000616684 SH2D4BQ5SQS7 431 aa20.03■□□□□ 0.8
CDH23-212ENST00000616684 ZHX2Q9Y6X8 837 aa20.03■□□□□ 0.8
CDH23-212ENST00000616684 SPDYE16A6NNV3 312 aaPredicted RBP20.03■□□□□ 0.8
CDH23-212ENST00000616684 STXBP2Q15833 593 aa20.03■□□□□ 0.8
CDH23-212ENST00000616684 SPDYE2Q495Y8 402 aa20.03■□□□□ 0.8
CDH23-212ENST00000616684 SNRNP48Q6IEG0 339 aaKnown RBP20.03■□□□□ 0.8
CDH23-212ENST00000616684 TMEM35BQ8NCS4 154 aa20.03■□□□□ 0.8
CDH23-212ENST00000616684 NSUN6Q8TEA1 469 aaKnown RBP20.03■□□□□ 0.8
CDH23-212ENST00000616684 DLC1Q96QB1 1528 aa20.03■□□□□ 0.8
CDH23-212ENST00000616684 RNASELQ05823 741 aaKnown RBP20.02■□□□□ 0.8
CDH23-212ENST00000616684 PDCLQ13371 301 aa20.02■□□□□ 0.8
CDH23-212ENST00000616684 SP8Q8IXZ3 490 aa20.02■□□□□ 0.8
CDH23-212ENST00000616684 PRPF38AQ8NAV1 312 aaKnown RBP20.02■□□□□ 0.8
CDH23-212ENST00000616684 MIPOL1Q8TD10 442 aa20.02■□□□□ 0.8
CDH23-212ENST00000616684 FAM213AQ9BRX8 229 aa20.02■□□□□ 0.8
CDH23-212ENST00000616684 CAPN11Q9UMQ6 739 aa20.02■□□□□ 0.8
CDH23-212ENST00000616684 SPP2Q13103 211 aa20.02■□□□□ 0.8
CDH23-212ENST00000616684 PDIA5Q14554 519 aa20.02■□□□□ 0.8
CDH23-212ENST00000616684 PDIA6Q15084 440 aa20.02■□□□□ 0.8
CDH23-212ENST00000616684 PFDN6O15212 129 aa20.02■□□□□ 0.8
CDH23-212ENST00000616684 KIF22Q14807 665 aa20.02■□□□□ 0.8
CDH23-212ENST00000616684 SBK1Q52WX2 424 aa20.02■□□□□ 0.8
CDH23-212ENST00000616684 CENPUQ71F23 418 aa20.02■□□□□ 0.8
CDH23-212ENST00000616684 GSPT2Q8IYD1 628 aaKnown RBP20.02■□□□□ 0.8
CDH23-212ENST00000616684 PYROXD1Q8WU10 500 aa20.02■□□□□ 0.8
CDH23-212ENST00000616684 KCNF1Q9H3M0 494 aa20.02■□□□□ 0.8
CDH23-212ENST00000616684 ESYT3A0FGR9 886 aa20.02■□□□□ 0.79
CDH23-212ENST00000616684 VAMP7P51809 220 aa20.02■□□□□ 0.79
CDH23-212ENST00000616684 MAP7Q14244 749 aa20.02■□□□□ 0.79
CDH23-212ENST00000616684 MAPK6Q16659 721 aa20.02■□□□□ 0.79
CDH23-212ENST00000616684 IRX2Q9BZI1 471 aaPredicted RBP20.02■□□□□ 0.79
CDH23-212ENST00000616684 EPB41L4AQ9HCS5 686 aaPredicted RBP20.02■□□□□ 0.79
CDH23-212ENST00000616684 LIMA1Q9UHB6 759 aaKnown RBP20.02■□□□□ 0.79
CDH23-212ENST00000616684 ZBED1O96006 694 aa20.01■□□□□ 0.79
CDH23-212ENST00000616684 PSMA2P25787 234 aa20.01■□□□□ 0.79
CDH23-212ENST00000616684 HPS3Q969F9 1004 aa20.01■□□□□ 0.79
CDH23-212ENST00000616684 WRNIP1Q96S55 665 aa20.01■□□□□ 0.79
CDH23-212ENST00000616684 LXNQ9BS40 222 aa20.01■□□□□ 0.79
CDH23-212ENST00000616684 HEMGNQ9BXL5 484 aa20.01■□□□□ 0.79
CDH23-212ENST00000616684 ZWILCHQ9H900 591 aa20.01■□□□□ 0.79
CDH23-212ENST00000616684 MTMR4Q9NYA4 1195 aa20.01■□□□□ 0.79
CDH23-212ENST00000616684 PIM2Q9P1W9 311 aa20.01■□□□□ 0.79
CDH23-212ENST00000616684 TUBE1Q9UJT0 475 aa20.01■□□□□ 0.79
CDH23-212ENST00000616684 AFF2P51816 1311 aa20.01■□□□□ 0.79
CDH23-212ENST00000616684 A0A1B0GTH6 734 aa20.01■□□□□ 0.79
CDH23-212ENST00000616684 E4F1Q66K89 784 aaPredicted RBP20.01■□□□□ 0.79
CDH23-212ENST00000616684 GDAP1Q8TB36 358 aa20.01■□□□□ 0.79
CDH23-212ENST00000616684 EIF2AK1Q9BQI3 630 aaKnown RBP20.01■□□□□ 0.79
CDH23-212ENST00000616684 EDEM3Q9BZQ6 932 aa20.01■□□□□ 0.79
CDH23-212ENST00000616684 DDX47Q9H0S4 455 aaKnown RBP20.01■□□□□ 0.79
CDH23-212ENST00000616684 SENP2Q9HC62 589 aa20.01■□□□□ 0.79
CDH23-212ENST00000616684 IPO11Q9UI26 975 aaKnown RBP20.01■□□□□ 0.79
CDH23-212ENST00000616684 CAMTA2O94983 1202 aa20.01■□□□□ 0.79
CDH23-212ENST00000616684 TRIM49P0CI25 452 aa20.01■□□□□ 0.79
CDH23-212ENST00000616684 TRIM49CP0CI26 452 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms