RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CXCL11O14625 94 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 ALDH1A1P00352 501 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 IFNB1P01574 187 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 RFC5P40937 340 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 AP3M2P53677 418 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 RPS6P62753 249 aaKnown RBP10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 CASC4Q6P4E1 433 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 POTEAQ6S8J7 498 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 HAUS6Q7Z4H7 955 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 CCDC170Q8IYT3 715 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 TTC39CQ8N584 583 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 ANKRD13CQ8N6S4 541 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 DAGLBQ8NCG7 672 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 MICAL1Q8TDZ2 1067 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 MRIQ9BWK5 157 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 KCNK9Q9NPC2 374 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 NKIRAS1Q9NYS0 192 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 RGL1Q9NZL6 768 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 NFAT5O94916 1531 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 GOLGA8SH3BPF8 625 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 KRIT1O00522 736 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 LAMC2Q13753 1193 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 MESDQ14696 234 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 ZNF699Q32M78 642 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 PLEKHH3Q7Z736 793 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 GIMAP7Q8NHV1 300 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 KIF2CQ99661 725 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 GOLPH3LQ9H4A5 285 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 SLC38A10Q9HBR0 1119 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 FBXO28Q9NVF7 368 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 SUCLA2Q9P2R7 463 aaPredicted RBP10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 PPP1R9AQ9ULJ8 1098 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 TCRBV5S4A2TA0A5A2 114 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 ZBBXA8MT70 800 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 OR6B2Q6IFH4 312 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 SHC4Q6S5L8 630 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 ADGRA1Q86SQ6 560 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 VSTM4Q8IW00 320 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 NME8Q8N427 588 aa10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 MTIF3Q9H2K0 278 aaKnown RBP10.21□□□□□ -0.78
CLTCL1-208ENST00000615606 PRCPP42785 496 aa10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 KCNB1Q14721 858 aa10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 RNF149Q8NC42 400 aa10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 RNF139Q8WU17 664 aa10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 MOV10L1Q9BXT6 1211 aaKnown RBP10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 ASAP2O43150 1006 aa10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 VIL1P09327 827 aaKnown RBP10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 TSPY1Q01534 308 aa10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 OPTNQ96CV9 577 aa10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 MANSC4A6NHS7 340 aaPredicted RBP10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 CPT1AP50416 773 aa10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 VAMP7P51809 220 aa10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 MTMR3Q13615 1198 aa10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 MAP1SQ66K74 1059 aaPredicted RBP10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 GPD1LQ8N335 351 aa10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 VGLL2Q8N8G2 317 aa10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 KCNB2Q92953 911 aa10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 TBC1D31Q96DN5 1066 aa10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 IL25Q9H293 177 aa10.2□□□□□ -0.78
CLTCL1-208ENST00000615606 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 EIF3CLB5ME19 914 aaKnown RBP10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 PRKCBP05771 671 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 VCAM1P19320 739 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 TBXAS1P24557 533 aaPredicted RBP10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 CASP1P29466 404 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 COL14A1Q05707 1796 aaKnown RBP10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 DGKDQ16760 1214 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 MON2Q7Z3U7 1717 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 TEX2Q8IWB9 1127 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 RUNDC3BQ96NL0 473 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 EIF3CQ99613 913 aaKnown RBP10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 KIAA1683Q9H0B3 1180 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 PPANQ9NQ55 473 aaKnown RBP10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 ERAP1Q9NZ08 941 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 PPP2R5DQ14738 602 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 IER5Q5VY09 327 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 TAAR1Q96RJ0 339 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 AGO2Q9UKV8 859 aaKnown RBP10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 HBP1O60381 514 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 ETF1P62495 437 aaKnown RBP10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 LMNB2Q03252 620 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 APOBEC3HQ6NTF7 200 aaKnown RBP10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 GSDMBQ8TAX9 411 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 BPIFA3Q9BQP9 254 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 DNAJC12Q9UKB3 198 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 HPS5Q9UPZ3 1129 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 TAF6LQ9Y6J9 622 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 FAM205CA6NFA0 338 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 RRN3P2A6NIE6 340 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 LGALS16A8MUM7 142 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 MAN1A1P33908 653 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 ARL4AP40617 200 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 GCLMP48507 274 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 ITKQ08881 620 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 C6orf163Q5TEZ5 329 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 C17orf53Q8N3J3 647 aaPredicted RBP10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 BBOF1Q8ND07 529 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 ZNF560Q96MR9 790 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 MRC1P22897 1456 aa10.19□□□□□ -0.78
CLTCL1-208ENST00000615606 SALL3Q9BXA9 1300 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms