RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 CCDC144BQ3MJ40 725 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 TCP11X2Q5H9J9 407 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 WDR78Q5VTH9 848 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 SEPT14Q6ZU15 432 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 APTXQ7Z2E3 356 aaKnown RBP9.87□□□□□ -0.83
CCDC47-207ENST00000612558 TMC6Q7Z403 805 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 FILIP1Q7Z7B0 1213 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 VSTM4Q8IW00 320 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 FAM114A1Q8IWE2 563 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 FAM43AQ8N2R8 423 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 ANKRD13CQ8N6S4 541 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 PARK7Q99497 189 aaKnown RBP9.87□□□□□ -0.83
CCDC47-207ENST00000612558 EFCC1Q9HA90 598 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 MORF4L1Q9UBU8 362 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 ODF2LQ9ULJ1 636 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.87□□□□□ -0.83
CCDC47-207ENST00000612558 STRNO43815 780 aa9.86□□□□□ -0.83
CCDC47-207ENST00000612558 GDF9O60383 454 aa9.86□□□□□ -0.83
CCDC47-207ENST00000612558 FAM13AO94988 1023 aa9.86□□□□□ -0.83
CCDC47-207ENST00000612558 FGFR1OPO95684 399 aaKnown RBP9.86□□□□□ -0.83
CCDC47-207ENST00000612558 GUCY2CP25092 1073 aa9.86□□□□□ -0.83
CCDC47-207ENST00000612558 YWHABP31946 246 aaKnown RBP9.86□□□□□ -0.83
CCDC47-207ENST00000612558 ZNF157P51786 506 aaPredicted RBP9.86□□□□□ -0.83
CCDC47-207ENST00000612558 KRT31Q15323 416 aa9.86□□□□□ -0.83
CCDC47-207ENST00000612558 SFR1Q86XK3 245 aa9.86□□□□□ -0.83
CCDC47-207ENST00000612558 IRF2BP1Q8IU81 584 aa9.86□□□□□ -0.83
CCDC47-207ENST00000612558 ABRAQ8N0Z2 381 aa9.86□□□□□ -0.83
CCDC47-207ENST00000612558 ATP6V0A1Q93050 837 aa9.86□□□□□ -0.83
CCDC47-207ENST00000612558 ZNF830Q96NB3 372 aaPredicted RBP9.86□□□□□ -0.83
CCDC47-207ENST00000612558 TSG101Q99816 390 aa9.86□□□□□ -0.83
CCDC47-207ENST00000612558 PTPN18Q99952 460 aa9.86□□□□□ -0.83
CCDC47-207ENST00000612558 PORCNQ9H237 461 aa9.86□□□□□ -0.83
CCDC47-207ENST00000612558 RTN4Q9NQC3 1192 aaKnown RBP9.86□□□□□ -0.83
CCDC47-207ENST00000612558 OLFML3Q9NRN5 406 aa9.86□□□□□ -0.83
CCDC47-207ENST00000612558 ANKEF1Q9NU02 776 aa9.86□□□□□ -0.83
CCDC47-207ENST00000612558 INTS13Q9NVM9 706 aa9.86□□□□□ -0.83
CCDC47-207ENST00000612558 TBC1D7Q9P0N9 293 aa9.86□□□□□ -0.83
CCDC47-207ENST00000612558 MAGEC2Q9UBF1 373 aaPredicted RBP9.86□□□□□ -0.83
CCDC47-207ENST00000612558 SEL1LQ9UBV2 794 aa9.86□□□□□ -0.83
CCDC47-207ENST00000612558 MANSC4A6NHS7 340 aaPredicted RBP9.85□□□□□ -0.83
CCDC47-207ENST00000612558 RSPH10B2B2RC85 870 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 TNFRSF10AO00220 468 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 RSPH10BP0C881 870 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 RARRES1P49788 294 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 ZNF131P52739 623 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 COPB1P53618 953 aaKnown RBP9.85□□□□□ -0.83
CCDC47-207ENST00000612558 ACTR2P61160 394 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 SP2Q02086 613 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 NEDD9Q14511 834 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 UGCGQ16739 394 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 SWSAP1Q6NVH7 229 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 MIS18BP1Q6P0N0 1132 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 KCNV1Q6PIU1 500 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 ABHD15Q6UXT9 468 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 CYFIP1Q7L576 1253 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 OTUD6AQ7L8S5 288 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 SAPCD2Q86UD0 394 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 CREBRFQ8IUR6 639 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 LRRC8AQ8IWT6 810 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 MYCT1Q8N699 235 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 GLIS3Q8NEA6 775 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 MORC4Q8TE76 937 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 SCFD1Q8WVM8 642 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 FGD4Q96M96 766 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 CCDC43Q96MW1 224 aaKnown RBP9.85□□□□□ -0.83
CCDC47-207ENST00000612558 BCAS3Q9H6U6 928 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 MRPL44Q9H9J2 332 aaKnown RBP9.85□□□□□ -0.83
CCDC47-207ENST00000612558 PARVGQ9HBI0 331 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 GABBR1Q9UBS5 961 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 WDR81Q562E7 1941 aa9.85□□□□□ -0.83
CCDC47-207ENST00000612558 ASB14A6NK59 587 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 N4BP3O15049 544 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 ATG7O95352 703 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 FKBP3Q00688 224 aaKnown RBP9.84□□□□□ -0.83
CCDC47-207ENST00000612558 FAM110CQ1W6H9 321 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 SPECC1LQ69YQ0 1117 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 RGMBQ6NW40 437 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 EPM2AIP1Q7L775 607 aaPredicted RBP9.84□□□□□ -0.83
CCDC47-207ENST00000612558 RASAL3Q86YV0 1011 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 ZNF507Q8TCN5 953 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 TIPINQ9BVW5 301 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 FGFBP2Q9BYJ0 223 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 KCTD10Q9H3F6 313 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 KCNF1Q9H3M0 494 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 ZCCHC17Q9NP64 241 aaKnown RBP9.84□□□□□ -0.83
CCDC47-207ENST00000612558 IVNS1ABPQ9Y6Y0 642 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 MYH9P35579 1960 aaKnown RBP9.84□□□□□ -0.83
CCDC47-207ENST00000612558 MYH11P35749 1972 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 PASKQ96RG2 1323 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 DOCK5Q9H7D0 1870 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 SFI1A8K8P3 1242 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 EIF3DO15371 548 aaKnown RBP eCLIP9.84□□□□□ -0.83
CCDC47-207ENST00000612558 TEX33O43247 280 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 HIP1RO75146 1068 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 TPM2P07951 284 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 SUPT20HL2P0C7V6 817 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 UBA1P22314 1058 aaKnown RBP9.84□□□□□ -0.83
CCDC47-207ENST00000612558 ADORA2AP29274 412 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 INHBEP58166 350 aa9.84□□□□□ -0.83
CCDC47-207ENST00000612558 SP4Q02446 784 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms