RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 MARCH8Q5T0T0 291 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 TMC5Q6UXY8 1006 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 LRRC55Q6ZSA7 311 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 CCDC149Q6ZUS6 474 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 RSPH3Q86UC2 560 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 VSIG10LQ86VR7 867 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 MCF2L2Q86YR7 1114 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 PJA1Q8NG27 643 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 GPR152Q8TDT2 470 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 TMEM47Q9BQJ4 181 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 SLC4A5Q9BY07 1137 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 RWDD1Q9H446 243 aaPredicted RBP8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 DCTPP1Q9H773 170 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 ARHGEF3Q9NR81 526 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 DZANK1Q9NVP4 752 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 ZSCAN32Q9NX65 697 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 PCDHB7Q9Y5E2 793 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 PCDHB15Q9Y5E8 787 aa8.35□□□□□ -1.07
PTCHD3P1-201ENST00000612350 DOCK5Q9H7D0 1870 aa8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 ABCB11O95342 1321 aa8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 TAF4O00268 1085 aa8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 LAMTOR5O43504 91 aa8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 MGEA5O60502 916 aa8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 APPP05067 770 aa8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 SLC3A2P08195 630 aaKnown RBP8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 SNHG28P0DPA3 235 aa8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 HSPD1P10809 573 aaKnown RBP8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 TOP1P11387 765 aaKnown RBP8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 MYCLP12524 364 aaPredicted RBP8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 GNAT2P19087 354 aa8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 SMC1AQ14683 1233 aaKnown RBP8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 KCNT2Q6UVM3 1135 aa8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 UNQ6494/PRO21346Q6UXR6 183 aa8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 IL31RAQ8NI17 732 aa8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 EXOC6Q8TAG9 804 aa8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 DDX1Q92499 740 aaKnown RBP8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 APPBP2Q92624 585 aa8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 SPATA6Q9NWH7 488 aaPredicted RBP8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 PLA2G2EQ9NZK7 142 aa8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 GMEB2Q9UKD1 530 aa8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 VPS9D1Q9Y2B5 631 aa8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 RALGAPA1Q6GYQ0 2036 aa8.34□□□□□ -1.07
PTCHD3P1-201ENST00000612350 CCDC171Q6TFL3 1326 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 IGSF9BQ9UPX0 1349 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 SRRM3A6NNA2 597 aaPredicted RBP8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 C9IYK1 514 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 M0R2C6 588 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 OPLAHO14841 1288 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 GDF9O60383 454 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 LRP3O75074 770 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 NEFLP07196 543 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 PBX3P40426 434 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 HSD17B4P51659 736 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 GHRHRQ02643 423 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 KRT17Q04695 432 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 NONOQ15233 471 aaKnown RBP eCLIP8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 LETM2Q2VYF4 491 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 UTP14CQ5TAP6 766 aaKnown RBP8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 DCLRE1AQ6PJP8 1040 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 METTL7BQ6UX53 244 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 STOX1Q6ZVD7 989 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 MAP4K1Q92918 833 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 LRRCC1Q9C099 1032 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CPVLQ9H3G5 476 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 SLC2A4RGQ9NR83 387 aa8.33□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CYSRT1A8MQ03 144 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 NOP56O00567 594 aaKnown RBP8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 RANBP6O60518 1105 aaKnown RBP8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CXCL14O95715 111 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 FGFR1P11362 822 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 IBSPP21815 317 aaPredicted RBP8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 PPM1AP35813 382 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 FAM189BP81408 668 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CTDSPL2Q05D32 466 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 PAK2Q13177 524 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 SEMA3FQ13275 785 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 PGM5Q15124 567 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 PTPN14Q15678 1187 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CDC37Q16543 378 aaPredicted RBP8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 IER5Q5VY09 327 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ERICH6BQ5W0A0 696 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 TSSK4Q6SA08 328 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 PRR23CQ6ZRP0 262 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 SLC39A11Q8N1S5 342 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 GLG1Q92896 1179 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 NXPE3Q969Y0 559 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ZBTB10Q96DT7 871 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ZNF558Q96NG5 402 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CASD1Q96PB1 797 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 DDX23Q9BUQ8 820 aaKnown RBP8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 BCO2Q9BYV7 579 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 UBA5Q9GZZ9 404 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 SFXN1Q9H9B4 322 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 RGS18Q9NS28 235 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 SEMA4GQ9NTN9 838 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 RNF19AQ9NV58 838 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 SPG21Q9NZD8 308 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 EPS15L1Q9UBC2 864 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 TUBE1Q9UJT0 475 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ZNF215Q9UL58 517 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms