RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 BRAFP15056 766 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 SOX6P35712 828 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 ABCE1P61221 599 aaKnown RBP13.2□□□□□ -0.3
HLCS-207ENST00000612277 COG1Q8WTW3 980 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 TMEM161AQ9NX61 479 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 CLIC4Q9Y696 253 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 PRXQ9BXM0 1461 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 DDX5P17844 614 aaKnown RBP13.2□□□□□ -0.3
HLCS-207ENST00000612277 SMARCA1P28370 1054 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 LLGL1Q15334 1064 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 LRRC36Q1X8D7 754 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 ARMCX4Q5H9R4 360 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 ZNF658Q5TYW1 1059 aaPredicted RBP13.2□□□□□ -0.3
HLCS-207ENST00000612277 C16orf89Q6UX73 402 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 CMTM5Q96DZ9 223 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 RBM17Q96I25 401 aaKnown RBP13.2□□□□□ -0.3
HLCS-207ENST00000612277 MLXIPQ9HAP2 919 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 DLGAP2Q9P1A6 1054 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 SNX24Q9Y343 169 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.2□□□□□ -0.3
HLCS-207ENST00000612277 TPD52L2O43399 206 aaKnown RBP13.2□□□□□ -0.3
HLCS-207ENST00000612277 GAP43P17677 238 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 PSMA3P25788 255 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 ALDH18A1P54886 795 aaKnown RBP13.2□□□□□ -0.3
HLCS-207ENST00000612277 AKAP4Q5JQC9 854 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 TPTE2Q6XPS3 522 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 ARHGEF25Q86VW2 580 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 CPXCR1Q8N123 301 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 XAGE2Q96GT9 111 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 THAP9Q9H5L6 903 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 MTMR6Q9Y217 621 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 SYNGAP1Q96PV0 1343 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 MAGEA13PA6NCF6 341 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 SNAP25P60880 206 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 LAMC2Q13753 1193 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 MICU2Q8IYU8 434 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 HSPH1Q92598 858 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 H2AFY2Q9P0M6 372 aaPredicted RBP13.2□□□□□ -0.3
HLCS-207ENST00000612277 MORC2Q9Y6X9 1032 aaPredicted RBP13.2□□□□□ -0.3
HLCS-207ENST00000612277 LRRN2O75325 713 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 HSPA13P48723 471 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 WLSQ5T9L3 541 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 MFSD4BQ5TF39 518 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 DDIASQ8IXT1 998 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 NDUFAF2Q8N183 169 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 DDI1Q8WTU0 396 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 JDP2Q8WYK2 163 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 QKIQ96PU8 341 aaKnown RBP eCLIP13.2□□□□□ -0.3
HLCS-207ENST00000612277 CLEC4MQ9H2X3 399 aaPredicted RBP13.2□□□□□ -0.3
HLCS-207ENST00000612277 TRIM39Q9HCM9 518 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 USP40Q9NVE5 1235 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 RWDD2AQ9UIY3 292 aa13.2□□□□□ -0.3
HLCS-207ENST00000612277 ATP8B3O60423 1300 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 WASLO00401 505 aaPredicted RBP13.19□□□□□ -0.3
HLCS-207ENST00000612277 EIF3DO15371 548 aaKnown RBP eCLIP13.19□□□□□ -0.3
HLCS-207ENST00000612277 KRT6AP02538 564 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 KRT6BP04259 564 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 COPB2P35606 906 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 KRT6CP48668 564 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 CTCFP49711 727 aaPredicted RBP13.19□□□□□ -0.3
HLCS-207ENST00000612277 POLGP54098 1239 aaPredicted RBP13.19□□□□□ -0.3
HLCS-207ENST00000612277 OR6B2Q6IFH4 312 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 C11orf57Q6ZUT1 292 aaPredicted RBP13.19□□□□□ -0.3
HLCS-207ENST00000612277 GCNT4Q9P109 453 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 TMA7Q9Y2S6 64 aaKnown RBP13.19□□□□□ -0.3
HLCS-207ENST00000612277 FAM135AQ9P2D6 1515 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 ANGPT2O15123 496 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 PFKFB2O60825 505 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 PPP6R2O75170 966 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 KRT16P08779 473 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 POTEAQ6S8J7 498 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 METTL23Q86XA0 190 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 ZNF654Q8IZM8 581 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 UBE2TQ9NPD8 197 aaPredicted RBP13.19□□□□□ -0.3
HLCS-207ENST00000612277 DMAP1Q9NPF5 467 aaPredicted RBP13.19□□□□□ -0.3
HLCS-207ENST00000612277 AP4S1Q9Y587 144 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 TESPA1A2RU30 521 aaPredicted RBP13.19□□□□□ -0.3
HLCS-207ENST00000612277 TRIM13O60858 407 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 SNUPNO95149 360 aaKnown RBP13.19□□□□□ -0.3
HLCS-207ENST00000612277 HIBADHP31937 336 aaKnown RBP13.19□□□□□ -0.3
HLCS-207ENST00000612277 RHOT2Q8IXI1 618 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 GPBP1L1Q9HC44 474 aaPredicted RBP13.19□□□□□ -0.3
HLCS-207ENST00000612277 TFDP1Q14186 410 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 GAS2L3Q86XJ1 694 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 ACCSQ96QU6 501 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 EPN3Q9H201 632 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 PSTPIP2Q9H939 334 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 LRRIQ4A6NIV6 560 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 LRRC14Q15048 493 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 TBC1D9BQ66K14 1250 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 GPR141Q7Z602 305 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 BBS7Q8IWZ6 715 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 ZFP42Q96MM3 310 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 ZWILCHQ9H900 591 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 SELENONQ9NZV5 590 aa13.19□□□□□ -0.3
HLCS-207ENST00000612277 ZNF839A8K0R7 811 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 MYO1GB0I1T2 1018 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 EYA2O00167 538 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 FAM107AO95990 144 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 NFKBIAP25963 317 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms