RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 A0A0A6YYK5 440 aaPredicted RBP16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 PPFIA2O75334 1257 aa16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 ABCB4P21439 1286 aa16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 ZNF211Q13398 564 aaPredicted RBP16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 SNCBQ16143 134 aa16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 MFSD14BQ5SR56 506 aa16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 EPM2AIP1Q7L775 607 aaPredicted RBP16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 GLYCTKQ8IVS8 523 aa16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 LMBR1Q8WVP7 490 aa16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 HVCN1Q96D96 273 aa16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 SCLT1Q96NL6 688 aa16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 XPO6Q96QU8 1125 aaKnown RBP16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 AMFRQ9UKV5 643 aa16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 ASTN1O14525 1302 aa16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 PITPNM2Q9BZ72 1349 aa16.44■□□□□ 0.22
PCDHGB1-202ENST00000611598 IGKV6D-41A0A0C4DH26 115 aa16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 DDX3YO15523 660 aaKnown RBP16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 EVI5O60447 810 aa16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 CTNND1O60716 968 aaKnown RBP16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 NR3C1P04150 777 aa16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 GPSM2P81274 684 aa16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 GRAPQ13588 217 aa16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 ERMARDQ5T6L9 678 aa16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 SYCE1Q8N0S2 351 aa16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 SLC35G2Q8TBE7 412 aa16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 GRAPLQ8TC17 118 aaPredicted RBP16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 PCDHB13Q9Y5F0 798 aa16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 PLIN4Q96Q06 1357 aa16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 KIF13BQ9NQT8 1826 aa16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 SMIM23A6NLE4 172 aa16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 ZBTB5O15062 677 aa16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 GNPATO15228 680 aa16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 VPS36Q86VN1 386 aa16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 CHMP6Q96FZ7 201 aa16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 GOPCQ9HD26 462 aa16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 CNTNAP4Q9C0A0 1308 aa16.43■□□□□ 0.22
PCDHGB1-202ENST00000611598 SPDYE3A6NKU9 549 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 PLCG2P16885 1265 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 POLD1P28340 1107 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 GABPAQ06546 454 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 SPIRE1Q08AE8 756 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 LACTB2Q53H82 288 aaPredicted RBP16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 WLSQ5T9L3 541 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 P2RX7Q99572 595 aaKnown RBP16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 FAM129AQ9BZQ8 928 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 ZDHHC18Q9NUE0 388 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 UFL1O94874 794 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 TTLL1O95922 423 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 SPATA31C1P0DKV0 1188 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 CHN1P15882 459 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 PTENP60484 403 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 NEDD9Q14511 834 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 E2F5Q15329 346 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 AADACL2Q6P093 401 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 SLC30A5Q8TAD4 765 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 ARHGEF26Q96DR7 871 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 MTFR1LQ9H019 292 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 COL24A1Q17RW2 1714 aa16.42■□□□□ 0.22
PCDHGB1-202ENST00000611598 TLDC2A0PJX2 215 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 PDXKO00764 312 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 CALUO43852 315 aaPredicted RBP16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 DR1Q01658 176 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 XRCC4Q13426 336 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 DUPD1Q68J44 220 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 GIMAP7Q8NHV1 300 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 RNF25Q96BH1 459 aaPredicted RBP16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 ZNF317Q96PQ6 595 aaPredicted RBP16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 SELENOSQ9BQE4 189 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 ANO3Q9BYT9 981 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 ADAM7Q9H2U9 754 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 DDX4Q9NQI0 724 aaKnown RBP16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 SFI1A8K8P3 1242 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 GCNT3O95395 438 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 MMEP08473 750 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 PLTPP55058 493 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 NPEPPSP55786 919 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 CYP4A11Q02928 519 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 PRR16Q569H4 304 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 ARMC9Q7Z3E5 817 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 TAS2R14Q9NYV8 317 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 INTUQ9ULD6 942 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 THRAP3Q9Y2W1 955 aaKnown RBP16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 SNX24Q9Y343 169 aa16.41■□□□□ 0.22
PCDHGB1-202ENST00000611598 RAD21O60216 631 aa16.4■□□□□ 0.22
PCDHGB1-202ENST00000611598 IFI35P80217 286 aaPredicted RBP16.4■□□□□ 0.22
PCDHGB1-202ENST00000611598 PPATQ06203 517 aa16.4■□□□□ 0.22
PCDHGB1-202ENST00000611598 KLRC3Q07444 240 aa16.4■□□□□ 0.22
PCDHGB1-202ENST00000611598 PALB2Q86YC2 1186 aa16.4■□□□□ 0.22
PCDHGB1-202ENST00000611598 SYT2Q8N9I0 419 aaPredicted RBP16.4■□□□□ 0.22
PCDHGB1-202ENST00000611598 UHMK1Q8TAS1 419 aaKnown RBP16.4■□□□□ 0.22
PCDHGB1-202ENST00000611598 FBXO25Q8TCJ0 367 aa16.4■□□□□ 0.22
PCDHGB1-202ENST00000611598 RFFLQ8WZ73 363 aa16.4■□□□□ 0.22
PCDHGB1-202ENST00000611598 ALG3Q92685 438 aa16.4■□□□□ 0.22
PCDHGB1-202ENST00000611598 ERP44Q9BS26 406 aa16.4■□□□□ 0.22
PCDHGB1-202ENST00000611598 RUSC1Q9BVN2 902 aa16.4■□□□□ 0.22
PCDHGB1-202ENST00000611598 CNOT10Q9H9A5 744 aaKnown RBP16.4■□□□□ 0.22
PCDHGB1-202ENST00000611598 TYW1Q9NV66 732 aaKnown RBP16.4■□□□□ 0.22
PCDHGB1-202ENST00000611598 TMOD4Q9NZQ9 345 aa16.4■□□□□ 0.22
PCDHGB1-202ENST00000611598 ODF2LQ9ULJ1 636 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms