RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 RRP15Q9Y3B9 282 aaKnown RBP15.35■□□□□ 0.05
PCDHB16-201ENST00000609684 NCK2O43639 380 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 GARSP41250 739 aaKnown RBP15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 GYS2P54840 703 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 SEMA3FQ13275 785 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 PRR5LQ6MZQ0 368 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 RSRC2Q7L4I2 434 aaKnown RBP15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 NSUN6Q8TEA1 469 aaKnown RBP15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 DENND3A2RUS2 1198 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 MSH2P43246 934 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 GLE1Q53GS7 698 aaKnown RBP15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 ERICH1Q86X53 443 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 EIF2AK1Q9BQI3 630 aaKnown RBP15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 EPC1Q9H2F5 836 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 ADAM22Q9P0K1 906 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 SUGT1Q9Y2Z0 365 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 USP32Q8NFA0 1604 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 PRPSAP2O60256 369 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 CPP00450 1065 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 MKRN3Q13064 507 aaKnown RBP15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 RC3H1Q5TC82 1133 aaKnown RBP15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 RSPH3Q86UC2 560 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 PRPF38AQ8NAV1 312 aaKnown RBP15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 LINC00116Q8NCU8 138 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 CFAP57Q96MR6 1250 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 SEL1LQ9UBV2 794 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 SCINQ9Y6U3 715 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 CD163L1Q9NR16 1453 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 ADGRB1O14514 1584 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 CLDN3O15551 220 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 ARL4AP40617 200 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 KIF22Q14807 665 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 RPS6KA2Q15349 733 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 RPUSD2Q8IZ73 545 aaKnown RBP15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 CCHCR1Q8TD31 782 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 FAM213AQ9BRX8 229 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 SNX24Q9Y343 169 aa15.34■□□□□ 0.05
PCDHB16-201ENST00000609684 KIDINS220Q9ULH0 1771 aa15.33■□□□□ 0.05
PCDHB16-201ENST00000609684 CEP170BQ9Y4F5 1589 aaPredicted RBP15.33■□□□□ 0.05
PCDHB16-201ENST00000609684 MIF4GDA9UHW6 222 aaKnown RBP15.33■□□□□ 0.05
PCDHB16-201ENST00000609684 ZNF543Q08ER8 600 aa15.33■□□□□ 0.05
PCDHB16-201ENST00000609684 ITPK1Q13572 414 aa15.33■□□□□ 0.05
PCDHB16-201ENST00000609684 ARHGEF18Q6ZSZ5 1173 aa15.33■□□□□ 0.05
PCDHB16-201ENST00000609684 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.33■□□□□ 0.05
PCDHB16-201ENST00000609684 GSDMBQ8TAX9 411 aa15.33■□□□□ 0.05
PCDHB16-201ENST00000609684 KAZALD1Q96I82 304 aa15.33■□□□□ 0.05
PCDHB16-201ENST00000609684 VCXQ9H320 206 aa15.33■□□□□ 0.05
PCDHB16-201ENST00000609684 EXOC1LA0A1B0GW35 172 aa15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 DRAP1Q14919 205 aaPredicted RBP15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 GSPT2Q8IYD1 628 aaKnown RBP15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 WDR24Q96S15 920 aa15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 OSBPL9Q96SU4 736 aa15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 HOXC10Q9NYD6 342 aa15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 OATP04181 439 aa15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 EIF3BP55884 814 aaKnown RBP15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 GPC5P78333 572 aa15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 DPYDQ12882 1025 aa15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 ZNF667Q5HYK9 610 aa15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 CNOT10Q9H9A5 744 aaKnown RBP15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 LRRC4Q9HBW1 653 aa15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 TUBE1Q9UJT0 475 aa15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 A0A1B0GTH6 734 aa15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 ACSL3O95573 720 aa15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 TRIM49P0CI25 452 aa15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 TRIM49CP0CI26 452 aa15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 VAMP7P51809 220 aa15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 PDIA5Q14554 519 aa15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 BBS9Q3SYG4 887 aa15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 LIMA1Q9UHB6 759 aaKnown RBP15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 HERC5Q9UII4 1024 aaKnown RBP15.33■□□□□ 0.04
PCDHB16-201ENST00000609684 SYNGAP1Q96PV0 1343 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 FAM49AQ9H0Q0 323 aaPredicted RBP15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 GABBR1Q9UBS5 961 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 CAPN11Q9UMQ6 739 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 ECE1P42892 770 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 CCZ1BP86790 482 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 CCZ1P86791 482 aaPredicted RBP15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 PASD1Q8IV76 773 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 INTS2Q9H0H0 1204 aaKnown RBP15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 KIAA1586Q9HCI6 787 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 FBXO40Q9UH90 709 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 HPS5Q9UPZ3 1129 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 PLAAQ9Y263 795 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 SFNP31947 248 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 PRPSAP1Q14558 356 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 MUM1Q2TAK8 710 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 ADSSL1Q8N142 457 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 TCP11Q8WWU5 503 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 ZWILCHQ9H900 591 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 SPATA31A1Q5TZJ5 1347 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 HMGB1P1B2RPK0 211 aaPredicted RBP15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 MAPK6Q16659 721 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 E4F1Q66K89 784 aaPredicted RBP15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 ZNF746Q6NUN9 644 aaPredicted RBP15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 CFAP61Q8NHU2 1237 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 CRAMP1Q96RY5 1269 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 NUF2Q9BZD4 464 aa15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 IRX2Q9BZI1 471 aaPredicted RBP15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 DIS3Q9Y2L1 958 aaKnown RBP15.32■□□□□ 0.04
PCDHB16-201ENST00000609684 PSMA2P25787 234 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms