RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 PTCH2Q9Y6C5 1203 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 SIP14410 1827 aa18.3■□□□□ 0.52
PMF1-206ENST00000606952 IGKV6-21A0A0C4DH24 114 aa18.29■□□□□ 0.52
PMF1-206ENST00000606952 RSPH10B2B2RC85 870 aa18.29■□□□□ 0.52
PMF1-206ENST00000606952 H3BRB1 525 aa18.29■□□□□ 0.52
PMF1-206ENST00000606952 TBCAO75347 108 aaKnown RBP18.29■□□□□ 0.52
PMF1-206ENST00000606952 RSPH10BP0C881 870 aa18.29■□□□□ 0.52
PMF1-206ENST00000606952 HSPA1AP0DMV8 641 aaKnown RBP18.29■□□□□ 0.52
PMF1-206ENST00000606952 HSPA1BP0DMV9 641 aaKnown RBP18.29■□□□□ 0.52
PMF1-206ENST00000606952 RARBP10826 455 aa18.29■□□□□ 0.52
PMF1-206ENST00000606952 ZNF165P49910 485 aa18.29■□□□□ 0.52
PMF1-206ENST00000606952 STK4Q13043 487 aa18.29■□□□□ 0.52
PMF1-206ENST00000606952 ZNF484Q5JVG2 852 aa18.29■□□□□ 0.52
PMF1-206ENST00000606952 ADSSL1Q8N142 457 aa18.29■□□□□ 0.52
PMF1-206ENST00000606952 KLHDC9Q8NEP7 349 aa18.29■□□□□ 0.52
PMF1-206ENST00000606952 KAT2BQ92831 832 aa18.29■□□□□ 0.52
PMF1-206ENST00000606952 KIFAP3Q92845 792 aa18.29■□□□□ 0.52
PMF1-206ENST00000606952 DRC1Q96MC2 740 aa18.29■□□□□ 0.52
PMF1-206ENST00000606952 RBSNQ9H1K0 784 aa18.29■□□□□ 0.52
PMF1-206ENST00000606952 TUT1Q9H6E5 874 aaKnown RBP18.29■□□□□ 0.52
PMF1-206ENST00000606952 DDX20Q9UHI6 824 aaKnown RBP18.29■□□□□ 0.52
PMF1-206ENST00000606952 IKBKBO14920 756 aa18.28■□□□□ 0.52
PMF1-206ENST00000606952 HIP1RO75146 1068 aa18.28■□□□□ 0.52
PMF1-206ENST00000606952 MAFO75444 373 aaPredicted RBP18.28■□□□□ 0.52
PMF1-206ENST00000606952 FAM13AO94988 1023 aa18.28■□□□□ 0.52
PMF1-206ENST00000606952 INHAP05111 366 aa18.28■□□□□ 0.52
PMF1-206ENST00000606952 ZNF286BP0CG31 522 aa18.28■□□□□ 0.52
PMF1-206ENST00000606952 CD44P16070 742 aaKnown RBP18.28■□□□□ 0.52
PMF1-206ENST00000606952 CACNB1Q02641 598 aaPredicted RBP18.28■□□□□ 0.52
PMF1-206ENST00000606952 FSCN1Q16658 493 aaKnown RBP18.28■□□□□ 0.52
PMF1-206ENST00000606952 BMT2Q1RMZ1 405 aa18.28■□□□□ 0.52
PMF1-206ENST00000606952 MTERF2Q49AM1 385 aa18.28■□□□□ 0.52
PMF1-206ENST00000606952 ISM2Q6H9L7 571 aa18.28■□□□□ 0.52
PMF1-206ENST00000606952 EPM2AIP1Q7L775 607 aaPredicted RBP18.28■□□□□ 0.52
PMF1-206ENST00000606952 SFR1Q86XK3 245 aa18.28■□□□□ 0.52
PMF1-206ENST00000606952 GUF1Q8N442 669 aaKnown RBP18.28■□□□□ 0.52
PMF1-206ENST00000606952 JPH2Q9BR39 696 aaPredicted RBP18.28■□□□□ 0.52
PMF1-206ENST00000606952 ST6GALNAC4Q9H4F1 302 aa18.28■□□□□ 0.52
PMF1-206ENST00000606952 KAT6AQ92794 2004 aa18.28■□□□□ 0.52
PMF1-206ENST00000606952 UBE4BO95155 1302 aa18.27■□□□□ 0.52
PMF1-206ENST00000606952 EIF3DO15371 548 aaKnown RBP eCLIP18.27■□□□□ 0.52
PMF1-206ENST00000606952 PLS3P13797 630 aa18.27■□□□□ 0.52
PMF1-206ENST00000606952 PURAQ00577 322 aaKnown RBP18.27■□□□□ 0.52
PMF1-206ENST00000606952 EMC2Q15006 297 aa18.27■□□□□ 0.52
PMF1-206ENST00000606952 HERC4Q5GLZ8 1057 aaPredicted RBP18.27■□□□□ 0.52
PMF1-206ENST00000606952 CCSAPQ6IQ19 270 aaPredicted RBP18.27■□□□□ 0.52
PMF1-206ENST00000606952 LINC01465Q8N7H1 131 aa18.27■□□□□ 0.52
PMF1-206ENST00000606952 SLC17A8Q8NDX2 589 aa18.27■□□□□ 0.52
PMF1-206ENST00000606952 KATNAL1Q9BW62 490 aa18.27■□□□□ 0.52
PMF1-206ENST00000606952 STRA6Q9BX79 667 aa18.27■□□□□ 0.52
PMF1-206ENST00000606952 RNPEPQ9H4A4 650 aa18.27■□□□□ 0.52
PMF1-206ENST00000606952 SPC25Q9HBM1 224 aa18.27■□□□□ 0.52
PMF1-206ENST00000606952 CBX8Q9HC52 389 aa18.27■□□□□ 0.52
PMF1-206ENST00000606952 LARSQ9P2J5 1176 aaKnown RBP18.27■□□□□ 0.52
PMF1-206ENST00000606952 GOLGA6L3A6NEY3 463 aa18.26■□□□□ 0.51
PMF1-206ENST00000606952 PPP1R37O75864 691 aa18.26■□□□□ 0.51
PMF1-206ENST00000606952 MARK3P27448 753 aa18.26■□□□□ 0.51
PMF1-206ENST00000606952 HOXC8P31273 242 aa18.26■□□□□ 0.51
PMF1-206ENST00000606952 PRCPP42785 496 aa18.26■□□□□ 0.51
PMF1-206ENST00000606952 POLGP54098 1239 aaPredicted RBP18.26■□□□□ 0.51
PMF1-206ENST00000606952 RAD51AP2Q09MP3 1159 aa18.26■□□□□ 0.51
PMF1-206ENST00000606952 ALCAMQ13740 583 aa18.26■□□□□ 0.51
PMF1-206ENST00000606952 NCAPHQ15003 741 aa18.26■□□□□ 0.51
PMF1-206ENST00000606952 UVSSAQ2YD98 709 aa18.26■□□□□ 0.51
PMF1-206ENST00000606952 DHX40Q8IX18 779 aaKnown RBP18.26■□□□□ 0.51
PMF1-206ENST00000606952 SMYD4Q8IYR2 804 aaPredicted RBP18.26■□□□□ 0.51
PMF1-206ENST00000606952 ENOX1Q8TC92 643 aaKnown RBP18.26■□□□□ 0.51
PMF1-206ENST00000606952 SPIRE2Q8WWL2 714 aa18.26■□□□□ 0.51
PMF1-206ENST00000606952 SLC7A3Q8WY07 619 aa18.26■□□□□ 0.51
PMF1-206ENST00000606952 DHTKD1Q96HY7 919 aaPredicted RBP18.26■□□□□ 0.51
PMF1-206ENST00000606952 MED15Q96RN5 788 aa18.26■□□□□ 0.51
PMF1-206ENST00000606952 SH2D3AQ9BRG2 576 aa18.26■□□□□ 0.51
PMF1-206ENST00000606952 XPNPEP3Q9NQH7 507 aa18.26■□□□□ 0.51
PMF1-206ENST00000606952 RWDD2AQ9UIY3 292 aa18.26■□□□□ 0.51
PMF1-206ENST00000606952 TRPC6Q9Y210 931 aa18.26■□□□□ 0.51
PMF1-206ENST00000606952 MYADML2A6NDP7 307 aa18.25■□□□□ 0.51
PMF1-206ENST00000606952 MAGEB2O15479 319 aa18.25■□□□□ 0.51
PMF1-206ENST00000606952 ZEB2O60315 1214 aa18.25■□□□□ 0.51
PMF1-206ENST00000606952 KIF20AO95235 890 aa18.25■□□□□ 0.51
PMF1-206ENST00000606952 C22orf31O95567 290 aa18.25■□□□□ 0.51
PMF1-206ENST00000606952 INSRRP14616 1297 aa18.25■□□□□ 0.51
PMF1-206ENST00000606952 SCP2P22307 547 aa18.25■□□□□ 0.51
PMF1-206ENST00000606952 CNGA1P29973 690 aa18.25■□□□□ 0.51
PMF1-206ENST00000606952 CTCFP49711 727 aaPredicted RBP18.25■□□□□ 0.51
PMF1-206ENST00000606952 NCKAP1LP55160 1127 aa18.25■□□□□ 0.51
PMF1-206ENST00000606952 STIM1Q13586 685 aa18.25■□□□□ 0.51
PMF1-206ENST00000606952 NTPCRQ9BSD7 190 aaKnown RBP18.25■□□□□ 0.51
PMF1-206ENST00000606952 FGFBP2Q9BYJ0 223 aa18.25■□□□□ 0.51
PMF1-206ENST00000606952 HMX1Q9NP08 348 aaPredicted RBP18.25■□□□□ 0.51
PMF1-206ENST00000606952 SLC39A2Q9NP94 309 aa18.25■□□□□ 0.51
PMF1-206ENST00000606952 KCNG1Q9UIX4 513 aa18.25■□□□□ 0.51
PMF1-206ENST00000606952 RRN3P2A6NIE6 340 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 SMTNL1A8MU46 457 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 PSMA7O14818 248 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 C6orf222P0C671 652 aaPredicted RBP18.24■□□□□ 0.51
PMF1-206ENST00000606952 CCNE1P24864 410 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 ARL2P36404 184 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 PSEN2P49810 448 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 IRX5P78411 483 aaPredicted RBP18.24■□□□□ 0.51
PMF1-206ENST00000606952 BEX3Q00994 111 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms