RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 CRAMP1Q96RY5 1269 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 PIGSQ96S52 555 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 ERP44Q9BS26 406 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 PRDM11Q9NQV5 511 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 BARHL2Q9NY43 387 aa16.72■□□□□ 0.27
RER1-209ENST00000605895 FRMPD2Q68DX3 1309 aaPredicted RBP16.71■□□□□ 0.27
RER1-209ENST00000605895 TNS3Q68CZ2 1445 aa16.71■□□□□ 0.27
RER1-209ENST00000605895 TSPY3P0CV98 308 aa16.71■□□□□ 0.27
RER1-209ENST00000605895 TSPY8P0CW00 308 aa16.71■□□□□ 0.27
RER1-209ENST00000605895 NR2F2P24468 414 aa16.71■□□□□ 0.27
RER1-209ENST00000605895 EXOC3L1Q86VI1 746 aa16.71■□□□□ 0.27
RER1-209ENST00000605895 CPNE8Q86YQ8 564 aa16.71■□□□□ 0.27
RER1-209ENST00000605895 SLC35G2Q8TBE7 412 aa16.71■□□□□ 0.27
RER1-209ENST00000605895 MTA3Q9BTC8 594 aa16.71■□□□□ 0.27
RER1-209ENST00000605895 NSRP1Q9H0G5 558 aaKnown RBP16.71■□□□□ 0.27
RER1-209ENST00000605895 PAPOLBQ9NRJ5 636 aaKnown RBP16.71■□□□□ 0.27
RER1-209ENST00000605895 HAO1Q9UJM8 370 aa16.71■□□□□ 0.27
RER1-209ENST00000605895 HIP1RO75146 1068 aa16.71■□□□□ 0.27
RER1-209ENST00000605895 RPL21P46778 160 aaKnown RBP16.71■□□□□ 0.27
RER1-209ENST00000605895 CASP5P51878 434 aa16.71■□□□□ 0.27
RER1-209ENST00000605895 RBM5P52756 815 aaKnown RBP eCLIP16.71■□□□□ 0.27
RER1-209ENST00000605895 UBE2SQ16763 222 aa16.71■□□□□ 0.27
RER1-209ENST00000605895 TTC8Q8TAM2 541 aa16.71■□□□□ 0.27
RER1-209ENST00000605895 SYT15Q9BQS2 421 aa16.71■□□□□ 0.27
RER1-209ENST00000605895 HDAC9Q9UKV0 1011 aa16.71■□□□□ 0.27
RER1-209ENST00000605895 CORO1CQ9ULV4 474 aaPredicted RBP16.71■□□□□ 0.27
RER1-209ENST00000605895 NIP7Q9Y221 180 aaKnown RBP eCLIP16.71■□□□□ 0.27
RER1-209ENST00000605895 RPTORQ8N122 1335 aa16.71■□□□□ 0.26
RER1-209ENST00000605895 SUN1O94901 812 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 PDE6CP51160 858 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 KRT79Q5XKE5 535 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 ALG3Q92685 438 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 RAD54LQ92698 747 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 ARHGEF2Q92974 986 aaKnown RBP16.7■□□□□ 0.26
RER1-209ENST00000605895 RPS6KC1Q96S38 1066 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 GANQ9H2C0 597 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 CUEDC2Q9H467 287 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 METTL5Q9NRN9 209 aaKnown RBP16.7■□□□□ 0.26
RER1-209ENST00000605895 TAS2R14Q9NYV8 317 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 PCDHB13Q9Y5F0 798 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 PCDH11XQ9BZA7 1347 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 PCDH11YQ9BZA8 1340 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 TCRBV7S2A1N4TA0A589 114 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 CCDC188H7C350 402 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 MEIS1O00470 390 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 DDX3XO00571 662 aaKnown RBP eCLIP16.7■□□□□ 0.267e-7■■■■□ 23.1
RER1-209ENST00000605895 GSTA1P08263 222 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 KLRC3Q07444 240 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 RIPK1Q13546 671 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 AUHQ13825 339 aaKnown RBP16.7■□□□□ 0.26
RER1-209ENST00000605895 KIAA1755Q5JYT7 1200 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 SPOCK2Q92563 424 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 IQCDQ96DY2 449 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 ZDHHC18Q9NUE0 388 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.7■□□□□ 0.265e-6■■■□□ 15.8
RER1-209ENST00000605895 RAD21O60216 631 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 ENTPD5O75356 428 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 PECAM1P16284 738 aaPredicted RBP16.7■□□□□ 0.26
RER1-209ENST00000605895 RFC5P40937 340 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 MPP2Q14168 576 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 ANO7Q6IWH7 933 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 ZDHHC24Q6UX98 284 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 SMIM5Q71RC9 77 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 PRUNE1Q86TP1 453 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 VSIG1Q86XK7 387 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 CNBD1Q8NA66 436 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 SUPT20HQ8NEM7 779 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 ARHGEF26Q96DR7 871 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 DLGAP2Q9P1A6 1054 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 KIAA1024Q9UPX6 916 aa16.7■□□□□ 0.26
RER1-209ENST00000605895 ZBTB12Q9Y330 459 aaPredicted RBP16.7■□□□□ 0.26
RER1-209ENST00000605895 KLHL33A6NCF5 533 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 ERVV-2B6SEH9 535 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 PAPOLAP51003 745 aaKnown RBP16.69■□□□□ 0.26
RER1-209ENST00000605895 RAB27AP51159 221 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 MGAT5Q09328 741 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 EXOC3L4Q17RC7 722 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 TMEM154Q6P9G4 183 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 BICDL1Q6ZP65 573 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 SPATA21Q7Z572 469 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 SLC51AQ86UW1 340 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 PALB2Q86YC2 1186 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 CCHCR1Q8TD31 782 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 UCMAQ8WVF2 138 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 TEKT4Q8WW24 435 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 AK8Q96MA6 479 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 SLC4A9Q96Q91 983 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 RAB17Q9H0T7 212 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 SLITRK6Q9H5Y7 841 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 PYGLP06737 847 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 NEFHP12036 1026 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 CASP4P49662 377 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 EIF3BP55884 814 aaKnown RBP16.69■□□□□ 0.26
RER1-209ENST00000605895 SEMA3FQ13275 785 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 ARHGAP44Q17R89 818 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 RFX8Q6ZV50 586 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 TRIM59Q8IWR1 403 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 KRT35Q92764 455 aa16.69■□□□□ 0.26
RER1-209ENST00000605895 UTP4Q969X6 686 aaKnown RBP16.69■□□□□ 0.26
RER1-209ENST00000605895 AIPL1Q9NZN9 384 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms