RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 SSH3Q8TE77 659 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 ZNF845Q96IR2 970 aaPredicted RBP5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 TBCBQ99426 244 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 MYD88Q99836 296 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 JPH2Q9BR39 696 aaPredicted RBP5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 TTC12Q9H892 705 aaPredicted RBP5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 CYP4F11Q9HBI6 524 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 ARHGAP28Q9P2N2 729 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 ZMYM5Q9UJ78 669 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 TLR6Q9Y2C9 796 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 CEP152O94986 1710 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 ANKRD36BQ8N2N9 1353 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 FYCO1Q9BQS8 1478 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 EFCAB6Q5THR3 1501 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 C9IYK1 514 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 H0YC42 278 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 EIF1AYO14602 144 aaKnown RBP5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 CHUKO15111 745 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 GPR39O43194 453 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 SIAH2O43255 324 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 DDAH1O94760 285 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 USP17L7P0C7H9 530 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 NPR3P17342 541 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 CCNCP24863 283 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 MATR3P43243 847 aaKnown RBP eCLIP5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 PAPOLAP51003 745 aaKnown RBP5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 AK2P54819 239 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 C17orf67Q0P5P2 114 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 ZNF460Q14592 562 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 POSTNQ15063 836 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 PCBP1Q15365 356 aaKnown RBP eCLIP5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 KBTBD12Q3ZCT8 623 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 ANKDD1AQ495B1 522 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 SLC27A3Q5K4L6 730 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 C6orf15Q6UXA7 325 aaPredicted RBP5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 MICALCLQ6ZW33 695 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 GALNTL5Q7Z4T8 443 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 EPHX4Q8IUS5 362 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 FAM114A1Q8IWE2 563 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 TNS4Q8IZW8 715 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 CNDP2Q96KP4 475 aaKnown RBP5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 TBATAQ96M53 351 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 TMEM237Q96Q45 408 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 TSGA10Q9BZW7 698 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 MCM9Q9NXL9 1143 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 PKD2L1Q9P0L9 805 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 MYO6Q9UM54 1294 aa5.51□□□□□ -1.53
SPTBN1-206ENST00000602898 ZBTB43O43298 467 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 MTSS1O43312 755 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 YBEYP58557 167 aaPredicted RBP5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 NLRP5P59047 1200 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 PPARDQ03181 441 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 DNM1Q05193 864 aaKnown RBP5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 SGCGQ13326 291 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 SYDE2Q5VT97 1194 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 ZNF619Q8N2I2 560 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 RBM14Q96PK6 669 aaKnown RBP5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 C1QTNF2Q9BXJ5 285 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 STK31Q9BXU1 1019 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 OSBPL3Q9H4L5 887 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 ESF1Q9H501 851 aaKnown RBP5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 SH3BGRL2Q9UJC5 107 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 PCDHGA11Q9Y5H2 935 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 USP32Q8NFA0 1604 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 EHBP1L1Q8N3D4 1523 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 TPP1O14773 563 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 AREL1O15033 823 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 APOA4P06727 396 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 HSPA1AP0DMV8 641 aaKnown RBP5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 HSPA1BP0DMV9 641 aaKnown RBP5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 HOXC12P31275 282 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 INPP5BP32019 993 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 STAT1P42224 750 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 RANBP1P43487 201 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 IREB2P48200 963 aaKnown RBP5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 CSE1LP55060 971 aaKnown RBP5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 C21orf58P58505 322 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 AP2B1P63010 937 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 MPP3Q13368 585 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 GBX1Q14549 363 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 ANKRD39Q53RE8 183 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 INTS11Q5TA45 600 aaKnown RBP5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 YOD1Q5VVQ6 348 aaPredicted RBP5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 SLC9B2Q86UD5 537 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 CCDC84Q86UT8 332 aaPredicted RBP5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 COL23A1Q86Y22 540 aaPredicted RBP5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 FNIP1Q8TF40 1166 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 ZNF296Q8WUU4 475 aaPredicted RBP5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 ZNF606Q8WXB4 792 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 KAT2BQ92831 832 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 TRIM63Q969Q1 353 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 ARL8AQ96BM9 186 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 MPHOSPH9Q99550 1183 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 BATF3Q9NR55 127 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 ARGLU1Q9NWB6 273 aaPredicted RBP5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 DNM3Q9UQ16 869 aa5.5□□□□□ -1.53
SPTBN1-206ENST00000602898 NALCNQ8IZF0 1738 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 GOLGA6L19H0YKK7 550 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 BIN1O00499 593 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms