RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 ANO3Q9BYT9 981 aa19.1■□□□□ 0.65
USE1-208ENST00000600970 RIC8AQ9NPQ8 531 aa19.1■□□□□ 0.65
USE1-208ENST00000600970 ENTPD7Q9NQZ7 604 aa19.1■□□□□ 0.65
USE1-208ENST00000600970 PUF60Q9UHX1 559 aaKnown RBP19.1■□□□□ 0.65
USE1-208ENST00000600970 SLC12A7Q9Y666 1083 aa19.1■□□□□ 0.65
USE1-208ENST00000600970 H0Y858 1186 aa19.09■□□□□ 0.65
USE1-208ENST00000600970 FOSP01100 380 aaPredicted RBP19.09■□□□□ 0.65
USE1-208ENST00000600970 HOXB8P17481 243 aaPredicted RBP19.09■□□□□ 0.65
USE1-208ENST00000600970 ATP4AP20648 1035 aa19.09■□□□□ 0.65
USE1-208ENST00000600970 KIZQ2M2Z5 673 aa19.09■□□□□ 0.65
USE1-208ENST00000600970 PDXDC2PQ6P474 469 aa19.09■□□□□ 0.65
USE1-208ENST00000600970 KREMEN2Q8NCW0 462 aa19.09■□□□□ 0.65
USE1-208ENST00000600970 CASD1Q96PB1 797 aa19.09■□□□□ 0.65
USE1-208ENST00000600970 TMEM117Q9H0C3 514 aa19.09■□□□□ 0.65
USE1-208ENST00000600970 NGRNQ9NPE2 291 aaKnown RBP19.09■□□□□ 0.65
USE1-208ENST00000600970 ZNF302Q9NR11 478 aa19.09■□□□□ 0.65
USE1-208ENST00000600970 RNF19AQ9NV58 838 aa19.09■□□□□ 0.65
USE1-208ENST00000600970 CDH22Q9UJ99 828 aa19.09■□□□□ 0.65
USE1-208ENST00000600970 MYO15AQ9UKN7 3530 aa19.08■□□□□ 0.65
USE1-208ENST00000600970 CNTNAP5Q8WYK1 1306 aa19.08■□□□□ 0.65
USE1-208ENST00000600970 CFAP54Q96N23 3096 aa19.08■□□□□ 0.65
USE1-208ENST00000600970 GPR32O75388 356 aa19.08■□□□□ 0.64
USE1-208ENST00000600970 C22orf31O95567 290 aa19.08■□□□□ 0.64
USE1-208ENST00000600970 NUBP1P53384 320 aa19.08■□□□□ 0.64
USE1-208ENST00000600970 NAPAP54920 295 aa19.08■□□□□ 0.64
USE1-208ENST00000600970 KCNT2Q6UVM3 1135 aa19.08■□□□□ 0.64
USE1-208ENST00000600970 MICU3Q86XE3 530 aa19.08■□□□□ 0.64
USE1-208ENST00000600970 LRRC2Q9BYS8 371 aa19.08■□□□□ 0.64
USE1-208ENST00000600970 TSHZ2Q9NRE2 1034 aa19.08■□□□□ 0.64
USE1-208ENST00000600970 NR2E1Q9Y466 385 aa19.08■□□□□ 0.64
USE1-208ENST00000600970 MYH9P35579 1960 aaKnown RBP19.07■□□□□ 0.64
USE1-208ENST00000600970 VTNP04004 478 aa19.07■□□□□ 0.64
USE1-208ENST00000600970 SREBF1P36956 1147 aa19.07■□□□□ 0.64
USE1-208ENST00000600970 PBX3P40426 434 aa19.07■□□□□ 0.64
USE1-208ENST00000600970 SWSAP1Q6NVH7 229 aa19.07■□□□□ 0.64
USE1-208ENST00000600970 NIPA1Q7RTP0 329 aa19.07■□□□□ 0.64
USE1-208ENST00000600970 TMC7Q7Z402 723 aa19.07■□□□□ 0.64
USE1-208ENST00000600970 CASP10Q92851 521 aa19.07■□□□□ 0.64
USE1-208ENST00000600970 ZNF558Q96NG5 402 aa19.07■□□□□ 0.64
USE1-208ENST00000600970 PROB1E7EW31 1015 aa19.06■□□□□ 0.64
USE1-208ENST00000600970 SLC27A2O14975 620 aa19.06■□□□□ 0.64
USE1-208ENST00000600970 DHX15O43143 795 aaKnown RBP19.06■□□□□ 0.64
USE1-208ENST00000600970 GALR2O43603 387 aaPredicted RBP19.06■□□□□ 0.64
USE1-208ENST00000600970 ZNF76P36508 570 aa19.06■□□□□ 0.64
USE1-208ENST00000600970 CLK2P49760 499 aaKnown RBP19.06■□□□□ 0.64
USE1-208ENST00000600970 ADCY7P51828 1080 aa19.06■□□□□ 0.64
USE1-208ENST00000600970 KRT17Q04695 432 aa19.06■□□□□ 0.64
USE1-208ENST00000600970 PPP1R18Q6NYC8 613 aa19.06■□□□□ 0.64
USE1-208ENST00000600970 MIS18BP1Q6P0N0 1132 aa19.06■□□□□ 0.64
USE1-208ENST00000600970 SGMS1Q86VZ5 419 aa19.06■□□□□ 0.64
USE1-208ENST00000600970 TEX2Q8IWB9 1127 aa19.06■□□□□ 0.64
USE1-208ENST00000600970 POMKQ9H5K3 350 aa19.06■□□□□ 0.64
USE1-208ENST00000600970 SORCS3Q9UPU3 1222 aa19.06■□□□□ 0.64
USE1-208ENST00000600970 HCFC2Q9Y5Z7 792 aa19.06■□□□□ 0.64
USE1-208ENST00000600970 ZDBF2Q9HCK1 2354 aa19.05■□□□□ 0.64
USE1-208ENST00000600970 SMCO2A6NFE2 343 aa19.05■□□□□ 0.64
USE1-208ENST00000600970 C2CD4DB7Z1M9 353 aa19.05■□□□□ 0.64
USE1-208ENST00000600970 FAM86B1E9PN63 330 aa19.05■□□□□ 0.64
USE1-208ENST00000600970 HOXA2O43364 376 aa19.05■□□□□ 0.64
USE1-208ENST00000600970 BRD1O95696 1058 aa19.05■□□□□ 0.64
USE1-208ENST00000600970 FAM86B2P0C5J1 330 aa19.05■□□□□ 0.64
USE1-208ENST00000600970 PPM1AP35813 382 aa19.05■□□□□ 0.64
USE1-208ENST00000600970 AP3B2Q13367 1082 aa19.05■□□□□ 0.64
USE1-208ENST00000600970 MTMR3Q13615 1198 aa19.05■□□□□ 0.64
USE1-208ENST00000600970 TPRNQ4KMQ1 711 aa19.05■□□□□ 0.64
USE1-208ENST00000600970 PLA2G4DQ86XP0 818 aa19.05■□□□□ 0.64
USE1-208ENST00000600970 CKAP2LQ8IYA6 745 aa19.05■□□□□ 0.64
USE1-208ENST00000600970 UBALD2Q8IYN6 164 aa19.05■□□□□ 0.64
USE1-208ENST00000600970 LRRC43Q8N309 656 aa19.05■□□□□ 0.64
USE1-208ENST00000600970 METTL13Q8N6R0 699 aa19.05■□□□□ 0.64
USE1-208ENST00000600970 BBXQ8WY36 941 aaPredicted RBP19.05■□□□□ 0.64
USE1-208ENST00000600970 LSG1Q9H089 658 aaKnown RBP19.05■□□□□ 0.64
USE1-208ENST00000600970 ADAM7Q9H2U9 754 aa19.05■□□□□ 0.64
USE1-208ENST00000600970 SPG21Q9NZD8 308 aa19.05■□□□□ 0.64
USE1-208ENST00000600970 MAFBQ9Y5Q3 323 aaPredicted RBP19.05■□□□□ 0.64
USE1-208ENST00000600970 WDR81Q562E7 1941 aa19.04■□□□□ 0.64
USE1-208ENST00000600970 MYO10Q9HD67 2058 aa19.04■□□□□ 0.64
USE1-208ENST00000600970 CES5AQ6NT32 575 aa19.04■□□□□ 0.64
USE1-208ENST00000600970 ASCL5Q7RTU5 278 aa19.04■□□□□ 0.64
USE1-208ENST00000600970 TRMT1LQ7Z2T5 733 aaKnown RBP19.04■□□□□ 0.64
USE1-208ENST00000600970 ECHDC2Q86YB7 292 aa19.04■□□□□ 0.64
USE1-208ENST00000600970 ABI1Q8IZP0 508 aa19.04■□□□□ 0.64
USE1-208ENST00000600970 TMEM105Q8N8V8 129 aa19.04■□□□□ 0.64
USE1-208ENST00000600970 MRPL43Q8N983 215 aaKnown RBP19.04■□□□□ 0.64
USE1-208ENST00000600970 NECTIN4Q96NY8 510 aa19.04■□□□□ 0.64
USE1-208ENST00000600970 SMOC2Q9H3U7 446 aa19.04■□□□□ 0.64
USE1-208ENST00000600970 RBM28Q9NW13 759 aaKnown RBP19.04■□□□□ 0.64
USE1-208ENST00000600970 IGLV3-22A0A075B6J6 115 aa19.03■□□□□ 0.64
USE1-208ENST00000600970 C2orf71A6NGG8 1288 aa19.03■□□□□ 0.64
USE1-208ENST00000600970 IPO5O00410 1097 aaKnown RBP19.03■□□□□ 0.64
USE1-208ENST00000600970 ZSCAN20P17040 1043 aaPredicted RBP19.03■□□□□ 0.64
USE1-208ENST00000600970 CLCN3P51790 818 aa19.03■□□□□ 0.64
USE1-208ENST00000600970 NLRP11P59045 1033 aaKnown RBP19.03■□□□□ 0.64
USE1-208ENST00000600970 ITIH3Q06033 890 aa19.03■□□□□ 0.64
USE1-208ENST00000600970 FUT2Q10981 343 aa19.03■□□□□ 0.64
USE1-208ENST00000600970 SMC1AQ14683 1233 aaKnown RBP19.03■□□□□ 0.64
USE1-208ENST00000600970 CLLU1OSQ5K130 101 aa19.03■□□□□ 0.64
USE1-208ENST00000600970 APOA5Q6Q788 366 aa19.03■□□□□ 0.64
USE1-208ENST00000600970 SYNE3Q6ZMZ3 975 aa19.03■□□□□ 0.64
USE1-208ENST00000600970 BARHL2Q9NY43 387 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms