RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 SP4Q02446 784 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 TFF2Q03403 129 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 RAB30Q15771 203 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 XKR3Q5GH77 459 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 PDXDC2PQ6P474 469 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 CCDC73Q6ZRK6 1079 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 USP49Q70CQ1 688 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 KAT2BQ92831 832 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 DYDC2Q96IM9 177 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 NACC1Q96RE7 527 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 UHRF1Q96T88 793 aaPredicted RBP13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 MTG1Q9BT17 334 aaPredicted RBP13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 CUEDC2Q9H467 287 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 ANKEF1Q9NU02 776 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 LMBRD1Q9NUN5 540 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 RGL1Q9NZL6 768 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 CCDC39Q9UFE4 941 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 USP25Q9UHP3 1055 aa13.01□□□□□ -0.33
CHMP2A-207ENST00000600804 DDX11L8A8MPP1 907 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 H3BRB1 525 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 RFXAPO00287 272 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 BACH1O14867 736 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 ZNF862O60290 1169 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 SORBS3O60504 671 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 ATP4AP20648 1035 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 PTMSP20962 102 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 CDC25AP30304 524 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 MCM4P33991 863 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 GRB10Q13322 594 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 ECM1Q16610 540 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 UGCGQ16739 394 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 SPECC1Q5M775 1068 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 ATP8B4Q8TF62 1192 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 PPP1R13LQ8WUF5 828 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 BBXQ8WY36 941 aaPredicted RBP13□□□□□ -0.33
CHMP2A-207ENST00000600804 GLG1Q92896 1179 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 PNMA5Q96PV4 448 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 NIFKQ9BYG3 293 aaKnown RBP13□□□□□ -0.33
CHMP2A-207ENST00000600804 TUT1Q9H6E5 874 aaKnown RBP13□□□□□ -0.33
CHMP2A-207ENST00000600804 MAGEF1Q9HAY2 307 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 WRAP73Q9P2S5 460 aaPredicted RBP13□□□□□ -0.33
CHMP2A-207ENST00000600804 STK17AQ9UEE5 414 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 MSRAQ9UJ68 235 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 DBR1Q9UK59 544 aaKnown RBP13□□□□□ -0.33
CHMP2A-207ENST00000600804 KCNH3Q9ULD8 1083 aa13□□□□□ -0.33
CHMP2A-207ENST00000600804 COL1A2P08123 1366 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 POTEB3A0JP26 581 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 EPOPA6NHQ4 379 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 HBP1O60381 514 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 PRPF40AO75400 957 aaKnown RBP12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 OATP04181 439 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 BMP1P13497 986 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 PFKFB1P16118 471 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 HOXC8P31273 242 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 KCNQ1P51787 676 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 MRPS5P82675 430 aaKnown RBP12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 PRKCEQ02156 737 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 CYP4A11Q02928 519 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 CTTNQ14247 550 aaKnown RBP12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 KARSQ15046 597 aaKnown RBP12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 PLCB4Q15147 1175 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 E2F4Q16254 413 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 RRAGBQ5VZM2 374 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 POTEBQ6S5H4 581 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 OTUD6AQ7L8S5 288 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 SPRED2Q7Z698 418 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 SESTD1Q86VW0 696 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 TPH2Q8IWU9 490 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 ELOA2Q8IYF1 753 aaPredicted RBP12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 FSIP1Q8NA03 581 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 IQUBQ8NA54 791 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 BANK1Q8NDB2 785 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 ENGASEQ8NFI3 743 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 CDK5RAP3Q96JB5 506 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 SLC28A3Q9HAS3 691 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 NRBP2Q9NSY0 501 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 TRMT13Q9NUP7 481 aaKnown RBP12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 KIAA1024Q9UPX6 916 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 DNM3Q9UQ16 869 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 MICAL3Q7RTP6 2002 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 NLRC5Q86WI3 1866 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 ARID2Q68CP9 1835 aa12.99□□□□□ -0.33
CHMP2A-207ENST00000600804 C5orf42Q9H799 3197 aa12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 A0A087X0B3 334 aa12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 GADD45BO75293 160 aaPredicted RBP12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 EYA4O95677 639 aa12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 MYL3P08590 195 aa12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 ZNF286BP0CG31 522 aa12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 CYP2C9P11712 490 aa12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 PLCG1P19174 1290 aa12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 YWHABP31946 246 aaKnown RBP12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 SYKP43405 635 aa12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 PSEN2P49810 448 aa12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 FAM160A1Q05DH4 1040 aa12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 PTPN11Q06124 597 aaPredicted RBP12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 SNW1Q13573 536 aaKnown RBP12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 TARBP2Q15633 366 aaKnown RBP12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 NAALADL2Q58DX5 795 aa12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 UTP14CQ5TAP6 766 aaKnown RBP12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 NFRKBQ6P4R8 1299 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms