RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 TRPV2Q9Y5S1 764 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 BRWD1Q9NSI6 2320 aa9.87□□□□□ -0.83
SSBP4-208ENST00000600628 ATG2AQ2TAZ0 1938 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 BAG4O95429 457 aaKnown RBP9.86□□□□□ -0.83
SSBP4-208ENST00000600628 GHRP10912 638 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 XRCC6P12956 609 aaKnown RBP eCLIP9.86□□□□□ -0.83
SSBP4-208ENST00000600628 PRPHP41219 470 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 KCNJ6P48051 423 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 FXR2P51116 673 aaKnown RBP eCLIP9.86□□□□□ -0.83
SSBP4-208ENST00000600628 CLCN3P51790 818 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 FOSBP53539 338 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 CRYBB1P53674 252 aaPredicted RBP9.86□□□□□ -0.83
SSBP4-208ENST00000600628 TAP1Q03518 808 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 DRP2Q13474 957 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 PDIA5Q14554 519 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 CALCRLQ16602 461 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 TTC38Q5R3I4 469 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 FAM184AQ8NB25 1140 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 NEK9Q8TD19 979 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 ZNF689Q96CS4 500 aaPredicted RBP9.86□□□□□ -0.83
SSBP4-208ENST00000600628 RAD9AQ99638 391 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 EIF2AK1Q9BQI3 630 aaKnown RBP9.86□□□□□ -0.83
SSBP4-208ENST00000600628 POLR3CQ9BUI4 534 aaPredicted RBP9.86□□□□□ -0.83
SSBP4-208ENST00000600628 FAM49AQ9H0Q0 323 aaPredicted RBP9.86□□□□□ -0.83
SSBP4-208ENST00000600628 ZSWIM4Q9H7M6 989 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 CYP26B1Q9NR63 512 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 TCEAL9Q9UHQ7 104 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 SAMM50Q9Y512 469 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.86□□□□□ -0.83
SSBP4-208ENST00000600628 PCDHB6Q9Y5E3 794 aa9.86□□□□□ -0.83
SSBP4-208ENST00000600628 KIAA1671Q9BY89 1806 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 LCHNA4D1U4 455 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 LAD1O00515 517 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 ZBTB39O15060 712 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 MGEA5O60502 916 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 DKC1O60832 514 aaKnown RBP eCLIP9.85□□□□□ -0.83
SSBP4-208ENST00000600628 FOSL2P15408 326 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 MUTP22033 750 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 RPA1P27694 616 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 CD52P31358 61 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 MCM7P33993 719 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 GPC3P51654 580 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 NPEPPSP55786 919 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 FAM189BP81408 668 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 IL17AQ16552 155 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 PPP2R2DQ66LE6 453 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 EFCAB12Q6NXP0 572 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 TMCO2Q7Z6W1 182 aaPredicted RBP9.85□□□□□ -0.83
SSBP4-208ENST00000600628 FAM228AQ86W67 206 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 CKAP2LQ8IYA6 745 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 DYDC2Q96IM9 177 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 FTHL17Q9BXU8 183 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 IFT122Q9HBG6 1241 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 XPNPEP1Q9NQW7 623 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 ANKEF1Q9NU02 776 aa9.85□□□□□ -0.83
SSBP4-208ENST00000600628 NOC2LQ9Y3T9 749 aaKnown RBP9.85□□□□□ -0.83
SSBP4-208ENST00000600628 COL4A4P53420 1690 aaPredicted RBP9.85□□□□□ -0.83
SSBP4-208ENST00000600628 C5orf42Q9H799 3197 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 MYH15Q9Y2K3 1946 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 CUL9Q8IWT3 2517 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 EPOPA6NHQ4 379 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 POTEMA6NI47 508 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 C9IYK1 514 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 K7ELQ4 463 aaPredicted RBP9.84□□□□□ -0.83
SSBP4-208ENST00000600628 TLL1O43897 1013 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 GAS2O43903 313 aaKnown RBP9.84□□□□□ -0.83
SSBP4-208ENST00000600628 LPXNO60711 386 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 VTNP04004 478 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 CA3P07451 260 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 OR52Z1P0C646 297 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 EIF4BP23588 611 aaKnown RBP9.84□□□□□ -0.83
SSBP4-208ENST00000600628 YWHABP31946 246 aaKnown RBP9.84□□□□□ -0.83
SSBP4-208ENST00000600628 TXKP42681 527 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 NLRP11P59045 1033 aaKnown RBP9.84□□□□□ -0.83
SSBP4-208ENST00000600628 ATP2C1P98194 919 aaPredicted RBP9.84□□□□□ -0.83
SSBP4-208ENST00000600628 CDC42EP1Q00587 391 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 TBC1D8BQ0IIM8 1120 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 TMEM62Q0P6H9 643 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 PTGDRQ13258 359 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 ADGRE1Q14246 886 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 NBR1Q14596 966 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 ZNF174Q15697 407 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 KIZQ2M2Z5 673 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 RILPL1Q5EBL4 403 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 SPRED2Q7Z698 418 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 CATSPER3Q86XQ3 398 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 LRRC71Q8N4P6 559 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 SLC17A8Q8NDX2 589 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 MAFAQ8NHW3 353 aaPredicted RBP9.84□□□□□ -0.83
SSBP4-208ENST00000600628 CLP1Q92989 425 aaKnown RBP9.84□□□□□ -0.83
SSBP4-208ENST00000600628 TRAIPQ9BWF2 469 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 PRDM12Q9H4Q4 367 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 TUFT1Q9NNX1 390 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 DBR1Q9UK59 544 aaKnown RBP9.84□□□□□ -0.83
SSBP4-208ENST00000600628 SMC3Q9UQE7 1217 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 INSL6Q9Y581 213 aa9.84□□□□□ -0.83
SSBP4-208ENST00000600628 MORC2Q9Y6X9 1032 aaPredicted RBP9.84□□□□□ -0.83
SSBP4-208ENST00000600628 TTC28Q96AY4 2481 aa9.83□□□□□ -0.84
SSBP4-208ENST00000600628 MYO7AQ13402 2215 aa9.83□□□□□ -0.84
SSBP4-208ENST00000600628 NCOR1O75376 2440 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms