RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 MTRQ99707 1265 aa14.5□□□□□ -0.09
SRRM1-223ENST00000600523 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.5□□□□□ -0.092e-23■■■■□ 23.3
SRRM1-223ENST00000600523 IFIH1Q9BYX4 1025 aaKnown RBP14.5□□□□□ -0.09
SRRM1-223ENST00000600523 PRO3102Q9H379 93 aa14.5□□□□□ -0.09
SRRM1-223ENST00000600523 ATP6V0A4Q9HBG4 840 aa14.5□□□□□ -0.09
SRRM1-223ENST00000600523 DBR1Q9UK59 544 aaKnown RBP14.5□□□□□ -0.09
SRRM1-223ENST00000600523 KIAA1024Q9UPX6 916 aa14.5□□□□□ -0.09
SRRM1-223ENST00000600523 CLIC4Q9Y696 253 aa14.5□□□□□ -0.09
SRRM1-223ENST00000600523 SLC4A7Q9Y6M7 1214 aa14.5□□□□□ -0.09
SRRM1-223ENST00000600523 DNAH12Q6ZR08 3092 aa14.5□□□□□ -0.09
SRRM1-223ENST00000600523 TMEM150BA6NC51 233 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 ASAP2O43150 1006 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 MED24O75448 989 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 STBD1O95210 358 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 CHRNA1P02708 482 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 CXCL10P02778 98 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 SPATA31C1P0DKV0 1188 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 CRYBB1P53674 252 aaPredicted RBP14.49□□□□□ -0.09
SRRM1-223ENST00000600523 NPEPPSP55786 919 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 NUCB2P80303 420 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 PAK2Q13177 524 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 EMC2Q15006 297 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 SLC39A14Q15043 492 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 KRI1Q8N9T8 703 aaKnown RBP14.49□□□□□ -0.09
SRRM1-223ENST00000600523 MCPH1Q8NEM0 835 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 PIGOQ8TEQ8 1089 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 NLRP7Q8WX94 980 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 HERVK_113Q902F9 699 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 ZBTB10Q96DT7 871 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 SH2D3AQ9BRG2 576 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 INO80BQ9C086 356 aaPredicted RBP14.49□□□□□ -0.09
SRRM1-223ENST00000600523 DDX19AQ9NUU7 478 aaKnown RBP14.49□□□□□ -0.09
SRRM1-223ENST00000600523 RNF216Q9NWF9 866 aaPredicted RBP14.49□□□□□ -0.09
SRRM1-223ENST00000600523 SUCLA2Q9P2R7 463 aaPredicted RBP14.49□□□□□ -0.09
SRRM1-223ENST00000600523 WRAP73Q9P2S5 460 aaPredicted RBP14.49□□□□□ -0.09
SRRM1-223ENST00000600523 CCDC39Q9UFE4 941 aa14.49□□□□□ -0.09
SRRM1-223ENST00000600523 TANC1Q9C0D5 1861 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 TRIP12Q14669 1992 aaPredicted RBP14.48□□□□□ -0.09
SRRM1-223ENST00000600523 GPR182O15218 404 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 NBNO60934 754 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 RPS6KA5O75582 802 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 YEATS4O95619 227 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 VTNP04004 478 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 GHRP10912 638 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 NCLP19338 710 aaKnown RBP14.48□□□□□ -0.09
SRRM1-223ENST00000600523 MARCKSP29966 332 aaPredicted RBP14.48□□□□□ -0.09
SRRM1-223ENST00000600523 NASPP49321 788 aaPredicted RBP14.48□□□□□ -0.09
SRRM1-223ENST00000600523 RARRES1P49788 294 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 EPHB4P54760 987 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 NLRP11P59045 1033 aaKnown RBP14.48□□□□□ -0.09
SRRM1-223ENST00000600523 TFDP1Q14186 410 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 MXD4Q14582 209 aaPredicted RBP14.48□□□□□ -0.09
SRRM1-223ENST00000600523 KIZQ2M2Z5 673 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 PLEKHG4Q58EX7 1191 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 C9orf50Q5SZB4 431 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 TSHZ1Q6ZSZ6 1077 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 CABP7Q86V35 215 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 RHPN2Q8IUC4 686 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 KCNG4Q8TDN1 519 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 USP28Q96RU2 1077 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 FTHL17Q9BXU8 183 aa14.48□□□□□ -0.09
SRRM1-223ENST00000600523 GCOM2Q9BZD3 368 aaPredicted RBP14.48□□□□□ -0.09
SRRM1-223ENST00000600523 DHX33Q9H6R0 707 aaKnown RBP14.48□□□□□ -0.09
SRRM1-223ENST00000600523 SRPRBQ9Y5M8 271 aaKnown RBP14.48□□□□□ -0.09
SRRM1-223ENST00000600523 MORC2Q9Y6X9 1032 aaPredicted RBP14.48□□□□□ -0.09
SRRM1-223ENST00000600523 IGKV6-21A0A0C4DH24 114 aa14.47□□□□□ -0.09
SRRM1-223ENST00000600523 SPTLC2O15270 562 aa14.47□□□□□ -0.09
SRRM1-223ENST00000600523 BRD1O95696 1058 aa14.47□□□□□ -0.09
SRRM1-223ENST00000600523 KRT85P78386 507 aa14.47□□□□□ -0.09
SRRM1-223ENST00000600523 MGAT3Q09327 533 aa14.47□□□□□ -0.09
SRRM1-223ENST00000600523 IL17AQ16552 155 aa14.47□□□□□ -0.09
SRRM1-223ENST00000600523 LRIT3Q3SXY7 679 aa14.47□□□□□ -0.09
SRRM1-223ENST00000600523 FOXD4L6Q3SYB3 417 aaPredicted RBP14.47□□□□□ -0.09
SRRM1-223ENST00000600523 HABP4Q5JVS0 413 aaKnown RBP14.47□□□□□ -0.09
SRRM1-223ENST00000600523 FBXO47Q5MNV8 452 aa14.47□□□□□ -0.09
SRRM1-223ENST00000600523 TRAF7Q6Q0C0 670 aa14.47□□□□□ -0.09
SRRM1-223ENST00000600523 FOXD4L3Q6VB84 417 aaPredicted RBP14.47□□□□□ -0.09
SRRM1-223ENST00000600523 C16orf59Q7L2K0 433 aa14.47□□□□□ -0.09
SRRM1-223ENST00000600523 ZNF410Q86VK4 478 aa14.47□□□□□ -0.09
SRRM1-223ENST00000600523 DBF4BQ8NFT6 615 aa14.47□□□□□ -0.09
SRRM1-223ENST00000600523 SLC9A7Q96T83 725 aa14.47□□□□□ -0.09
SRRM1-223ENST00000600523 BHMT2Q9H2M3 363 aa14.47□□□□□ -0.09
SRRM1-223ENST00000600523 PCDH10Q9P2E7 1040 aa14.47□□□□□ -0.09
SRRM1-223ENST00000600523 TFIP11Q9UBB9 837 aaKnown RBP14.47□□□□□ -0.09
SRRM1-223ENST00000600523 COL4A3BPQ9Y5P4 624 aa14.47□□□□□ -0.09
SRRM1-223ENST00000600523 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.46□□□□□ -0.09
SRRM1-223ENST00000600523 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.46□□□□□ -0.09
SRRM1-223ENST00000600523 PP2D1A8MPX8 630 aa14.46□□□□□ -0.09
SRRM1-223ENST00000600523 ZBTB39O15060 712 aa14.46□□□□□ -0.09
SRRM1-223ENST00000600523 USO1O60763 962 aaKnown RBP14.46□□□□□ -0.09
SRRM1-223ENST00000600523 PPP6R2O75170 966 aa14.46□□□□□ -0.09
SRRM1-223ENST00000600523 EYA4O95677 639 aa14.46□□□□□ -0.09
SRRM1-223ENST00000600523 AMHP03971 560 aa14.46□□□□□ -0.09
SRRM1-223ENST00000600523 SSBP05455 408 aaKnown RBP eCLIP14.46□□□□□ -0.09
SRRM1-223ENST00000600523 EIF4BP23588 611 aaKnown RBP14.46□□□□□ -0.09
SRRM1-223ENST00000600523 CDC25AP30304 524 aa14.46□□□□□ -0.09
SRRM1-223ENST00000600523 GPC3P51654 580 aa14.46□□□□□ -0.09
SRRM1-223ENST00000600523 NCBP1Q09161 790 aaKnown RBP14.46□□□□□ -0.09
SRRM1-223ENST00000600523 NFX1Q12986 1120 aaKnown RBP14.46□□□□□ -0.09
SRRM1-223ENST00000600523 LPIN1Q14693 890 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms