RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 GALCP54803 685 aa20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 KNOP1Q1ED39 458 aaKnown RBP20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 C6orf118Q5T5N4 469 aa20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 NLRP3Q96P20 1036 aa20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 GOPCQ9HD26 462 aa20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 SIX2Q9NPC8 291 aa20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 CNOT7Q9UIV1 285 aaKnown RBP20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 RASAL2Q9UJF2 1139 aa20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 FRMPD2Q68DX3 1309 aaPredicted RBP20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 SPDYE3A6NKU9 549 aa20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 RGS16O15492 202 aaPredicted RBP20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 DDX3YO15523 660 aaKnown RBP20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 KLRC3Q07444 240 aa20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 ADCY2Q08462 1091 aa20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 COL23A1Q86Y22 540 aaPredicted RBP20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 RFFLQ8WZ73 363 aa20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 STMN4Q9H169 189 aaPredicted RBP20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 ADAM7Q9H2U9 754 aa20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 EBF2Q9HAK2 575 aa20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 INTS9Q9NV88 658 aaKnown RBP20.23■□□□□ 0.83
ARHGEF1-221ENST00000600387 COL5A3P25940 1745 aaPredicted RBP20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 GTPBP10A4D1E9 387 aaKnown RBP20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 PDXKO00764 312 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 BUB1BO60566 1050 aaPredicted RBP20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 GBP1P32455 592 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 DCAF17Q5H9S7 520 aaPredicted RBP20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 TRPM8Q7Z2W7 1104 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 FMNL3Q8IVF7 1028 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 ZHX3Q9H4I2 956 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 PNMA6FA0A0J9YX94 578 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 POTEB3A0JP26 581 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 POTECB2RU33 542 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 TMEM253P0C7T8 217 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 LMNB1P20700 586 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 STAT1P42224 750 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 UBE2SQ16763 222 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 KIAA1755Q5JYT7 1200 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 POTEBQ6S5H4 581 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 LRRC34Q8IZ02 419 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 MAB21L3Q8N8X9 362 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 SLC30A5Q8TAD4 765 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 SLC35G2Q8TBE7 412 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 TRPC6Q9Y210 931 aa20.22■□□□□ 0.83
ARHGEF1-221ENST00000600387 AFF2P51816 1311 aa20.21■□□□□ 0.83
ARHGEF1-221ENST00000600387 SLC16A3O15427 465 aaKnown RBP20.21■□□□□ 0.83
ARHGEF1-221ENST00000600387 RPL13P26373 211 aaKnown RBP20.21■□□□□ 0.83
ARHGEF1-221ENST00000600387 SLC12A3P55017 1021 aa20.21■□□□□ 0.83
ARHGEF1-221ENST00000600387 PPATQ06203 517 aa20.21■□□□□ 0.83
ARHGEF1-221ENST00000600387 ARSHQ5FYA8 562 aa20.21■□□□□ 0.83
ARHGEF1-221ENST00000600387 GJA10Q969M2 543 aa20.21■□□□□ 0.83
ARHGEF1-221ENST00000600387 TBC1D31Q96DN5 1066 aa20.21■□□□□ 0.83
ARHGEF1-221ENST00000600387 TMEM109Q9BVC6 243 aa20.21■□□□□ 0.83
ARHGEF1-221ENST00000600387 RTFDC1Q9BY42 306 aaPredicted RBP20.21■□□□□ 0.83
ARHGEF1-221ENST00000600387 NYXQ9GZU5 481 aa20.21■□□□□ 0.83
ARHGEF1-221ENST00000600387 DHX36Q9H2U1 1008 aaKnown RBP20.21■□□□□ 0.83
ARHGEF1-221ENST00000600387 GCNT4Q9P109 453 aa20.21■□□□□ 0.83
ARHGEF1-221ENST00000600387 NR2E1Q9Y466 385 aa20.21■□□□□ 0.83
ARHGEF1-221ENST00000600387 PLS1Q14651 629 aa20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 DCAF12L1Q5VU92 463 aa20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 BTNL9Q6UXG8 535 aa20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 TCP11Q8WWU5 503 aa20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 RNF25Q96BH1 459 aaPredicted RBP20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 AZI2Q9H6S1 392 aa20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 OSGEPQ9NPF4 335 aa20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 AJAP1Q9UKB5 411 aaPredicted RBP20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 TLDC2A0PJX2 215 aa20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 CASP5P51878 434 aa20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 PLTPP55058 493 aa20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 PRPF4BQ13523 1007 aaKnown RBP20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 TCERG1LQ5VWI1 586 aa20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 EPM2AIP1Q7L775 607 aaPredicted RBP20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 JAMLQ86YT9 394 aa20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 LNX1Q8TBB1 728 aaPredicted RBP20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 ELAC2Q9BQ52 826 aaKnown RBP20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 BATF3Q9NR55 127 aa20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 PARP2Q9UGN5 583 aa20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 PPP1R9AQ9ULJ8 1098 aa20.2■□□□□ 0.82
ARHGEF1-221ENST00000600387 KIAA0391O15091 583 aaKnown RBP20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 CLTAP09496 248 aa20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 MAPK7Q13164 816 aa20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 ZNF268Q14587 947 aaPredicted RBP20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 SLMAPQ14BN4 828 aa20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 BICDL1Q6ZP65 573 aa20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 CTNNBL1Q8WYA6 563 aaPredicted RBP20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 PRMT1Q99873 361 aaKnown RBP20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 TYW1Q9NV66 732 aaKnown RBP20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 RGL2O15211 777 aa20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 AKAP3O75969 853 aa20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 VIMP08670 466 aaKnown RBP20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 RPSAP08865 295 aaKnown RBP20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 SNHG28P0DPA3 235 aa20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 BTDP43251 543 aa20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 SLC29A2Q14542 456 aa20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 KCTD19Q17RG1 926 aaPredicted RBP20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 ZDHHC24Q6UX98 284 aa20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 PNMA8AQ86V59 439 aaPredicted RBP20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 SLC35C1Q96A29 364 aa20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 MTRF1LQ9UGC7 380 aaKnown RBP20.19■□□□□ 0.82
ARHGEF1-221ENST00000600387 PLIN4Q96Q06 1357 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms