RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 KCND2Q9NZV8 630 aa14.08□□□□□ -0.16
CHMP2A-206ENST00000600118 TUBE1Q9UJT0 475 aa14.08□□□□□ -0.16
CHMP2A-206ENST00000600118 MYMKA6NI61 221 aa14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 TREHO43280 583 aa14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 CD4P01730 458 aa14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 SSBP05455 408 aaKnown RBP eCLIP14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 GUCY2CP25092 1073 aa14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 ATN1P54259 1190 aaPredicted RBP14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 MKRN4PQ13434 485 aaPredicted RBP14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 EMC2Q15006 297 aa14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 CNNM4Q6P4Q7 775 aa14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 SV2BQ7L1I2 683 aa14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 SERINC5Q86VE9 423 aa14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 GPBP1Q86WP2 473 aa14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 ELOA2Q8IYF1 753 aaPredicted RBP14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 EXOC8Q8IYI6 725 aa14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 GPT2Q8TD30 523 aa14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 SLC7A3Q8WY07 619 aa14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 PAGE5Q96GU1 130 aa14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 CCDC43Q96MW1 224 aaKnown RBP14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 TOX2Q96NM4 488 aa14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 JPH2Q9BR39 696 aaPredicted RBP14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 TRMT13Q9NUP7 481 aaKnown RBP14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 PCDHA2Q9Y5H9 948 aa14.07□□□□□ -0.16
CHMP2A-206ENST00000600118 WDR81Q562E7 1941 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 SMIM35A0A1B0GVV1 85 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 CCDC85CA6NKD9 419 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 GAS2O43903 313 aaKnown RBP14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 B4GALT4O60513 344 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 USO1O60763 962 aaKnown RBP14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 POLGP54098 1239 aaPredicted RBP14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 MAPK7Q13164 816 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 PTGISQ16647 500 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 LRRC26Q2I0M4 334 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 TAF2Q6P1X5 1199 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 RUFY4Q6ZNE9 571 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 RPAINQ86UA6 219 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 CEP57L1Q8IYX8 460 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 KIAA0319LQ8IZA0 1049 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 CNNM3Q8NE01 707 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 MCPH1Q8NEM0 835 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 TIPINQ9BVW5 301 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 TRPV6Q9H1D0 765 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 ATP6V0A4Q9HBG4 840 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 DACT1Q9NYF0 836 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 MROH7Q68CQ1 1323 aa14.06□□□□□ -0.16
CHMP2A-206ENST00000600118 CYP2C9P11712 490 aa14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 ARL2P36404 184 aa14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 MDM2Q00987 491 aaPredicted RBP14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 TLE2Q04725 743 aa14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 PTK7Q13308 1070 aa14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 DRP2Q13474 957 aa14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 GIT2Q14161 759 aa14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 DHX8Q14562 1220 aaKnown RBP14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 TRIM71Q2Q1W2 868 aaKnown RBP14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 TRIM60Q495X7 471 aa14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 EFCAB12Q6NXP0 572 aa14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 DAW1Q8N136 415 aa14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 RETREG2Q8NC44 543 aa14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 STAMQ92783 540 aa14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 WNT8BQ93098 351 aa14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 DNAJC19Q96DA6 116 aa14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 C7orf25Q9BPX7 421 aa14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 TRIM9Q9C026 710 aa14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 BMP2KQ9NSY1 1161 aaPredicted RBP14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 MYH9P35579 1960 aaKnown RBP14.05□□□□□ -0.16
CHMP2A-206ENST00000600118 NPHP3-ACAD11A0A0J9YXS1 232 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 FRMD3A2A2Y4 597 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 PQBP1O60828 265 aaKnown RBP14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 KINO60870 393 aaKnown RBP14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 MBD3O95983 291 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 CLCN3P51790 818 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 ZNF131P52739 623 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 RTP1P59025 263 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 AMPD3Q01432 767 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 RBL2Q08999 1139 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 IER5Q5VY09 327 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 KANK3Q6NY19 840 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 GRAMD1CQ8IYS0 662 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 LRRC71Q8N4P6 559 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 DHX38Q92620 1227 aaKnown RBP14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 DDX12PQ92771 950 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 TMEM143Q96AN5 459 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 REEP2Q9BRK0 252 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 LRRC27Q9C0I9 530 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 SUGCTQ9HAC7 445 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 GPRC5CQ9NQ84 441 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 ODF2LQ9ULJ1 636 aa14.04□□□□□ -0.16
CHMP2A-206ENST00000600118 GTPBP6O43824 516 aaPredicted RBP14.03□□□□□ -0.16
CHMP2A-206ENST00000600118 HIP1RO75146 1068 aa14.03□□□□□ -0.16
CHMP2A-206ENST00000600118 RPLP2P05387 115 aaKnown RBP14.03□□□□□ -0.16
CHMP2A-206ENST00000600118 MYL1P05976 194 aa14.03□□□□□ -0.16
CHMP2A-206ENST00000600118 PRR29P0C7W0 189 aa14.03□□□□□ -0.16
CHMP2A-206ENST00000600118 PTMSP20962 102 aa14.03□□□□□ -0.16
CHMP2A-206ENST00000600118 TMOD1P28289 359 aa14.03□□□□□ -0.16
CHMP2A-206ENST00000600118 CASP1P29466 404 aa14.03□□□□□ -0.16
CHMP2A-206ENST00000600118 AFMP43652 599 aa14.03□□□□□ -0.16
CHMP2A-206ENST00000600118 FAAP100Q0VG06 881 aa14.03□□□□□ -0.16
CHMP2A-206ENST00000600118 CUL4BQ13620 913 aa14.03□□□□□ -0.16
CHMP2A-206ENST00000600118 NFKBIBQ15653 356 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms