RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 GHRP10912 638 aa14.23□□□□□ -0.13
UPF1-208ENST00000600012 SREBF1P36956 1147 aa14.23□□□□□ -0.13
UPF1-208ENST00000600012 ATP2C1P98194 919 aaPredicted RBP14.23□□□□□ -0.13
UPF1-208ENST00000600012 TCEAL5Q5H9L2 206 aa14.23□□□□□ -0.13
UPF1-208ENST00000600012 POTEDQ86YR6 584 aa14.23□□□□□ -0.13
UPF1-208ENST00000600012 TEX2Q8IWB9 1127 aa14.23□□□□□ -0.13
UPF1-208ENST00000600012 FIBCD1Q8N539 461 aa14.23□□□□□ -0.13
UPF1-208ENST00000600012 SEPT1Q8WYJ6 367 aa14.23□□□□□ -0.13
UPF1-208ENST00000600012 PABPC5Q96DU9 382 aaKnown RBP14.23□□□□□ -0.13
UPF1-208ENST00000600012 CLIC6Q96NY7 704 aa14.23□□□□□ -0.13
UPF1-208ENST00000600012 TMEM60Q9H2L4 133 aa14.23□□□□□ -0.13
UPF1-208ENST00000600012 NSUN3Q9H649 340 aaKnown RBP14.23□□□□□ -0.13
UPF1-208ENST00000600012 EHMT1Q9H9B1 1298 aa14.23□□□□□ -0.13
UPF1-208ENST00000600012 C11orf16Q9NQ32 467 aa14.23□□□□□ -0.13
UPF1-208ENST00000600012 TUBE1Q9UJT0 475 aa14.23□□□□□ -0.13
UPF1-208ENST00000600012 FBXO2Q9UK22 296 aaPredicted RBP14.23□□□□□ -0.13
UPF1-208ENST00000600012 FAM50BQ9Y247 325 aa14.23□□□□□ -0.13
UPF1-208ENST00000600012 RWDD3Q9Y3V2 267 aa14.23□□□□□ -0.13
UPF1-208ENST00000600012 ADGRA3Q8IWK6 1321 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 LOXHD1Q8IVV2 1947 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 MBLAC1A4D2B0 266 aaPredicted RBP14.22□□□□□ -0.13
UPF1-208ENST00000600012 C5orf67F2Z3F1 127 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 SLC37A4O43826 429 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 CUTAO60888 179 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 ATP9AO75110 1047 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 MBD3O95983 291 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 RPLP2P05387 115 aaKnown RBP14.22□□□□□ -0.13
UPF1-208ENST00000600012 RB1P06400 928 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 ITGB5P18084 799 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 LIG1P18858 919 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 SSTR3P32745 418 aaPredicted RBP14.22□□□□□ -0.13
UPF1-208ENST00000600012 CTNNB1P35222 781 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 MGAT3Q09327 533 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 MTMR1Q13613 665 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 COL19A1Q14993 1142 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 GRIK4Q16099 956 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 AXDND1Q5T1B0 1012 aaPredicted RBP14.22□□□□□ -0.13
UPF1-208ENST00000600012 RUFY4Q6ZNE9 571 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 C4orf32Q8N8J7 132 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 KRI1Q8N9T8 703 aaKnown RBP14.22□□□□□ -0.13
UPF1-208ENST00000600012 CRYGNQ8WXF5 182 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 GLG1Q92896 1179 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 C11orf84Q9BUA3 381 aaPredicted RBP14.22□□□□□ -0.13
UPF1-208ENST00000600012 LMAN2LQ9H0V9 348 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 GOLPH3LQ9H4A5 285 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 SMARCAD1Q9H4L7 1026 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 UBIAD1Q9Y5Z9 338 aa14.22□□□□□ -0.13
UPF1-208ENST00000600012 GSTTP1A0A1W2PQM5 241 aa14.21□□□□□ -0.13
UPF1-208ENST00000600012 FAM86C2PA6NEL3 165 aa14.21□□□□□ -0.13
UPF1-208ENST00000600012 H3BQ06 376 aaPredicted RBP14.21□□□□□ -0.13
UPF1-208ENST00000600012 MAFGO15525 162 aa14.21□□□□□ -0.13
UPF1-208ENST00000600012 NCK2O43639 380 aa14.21□□□□□ -0.13
UPF1-208ENST00000600012 MARK3P27448 753 aa14.21□□□□□ -0.13
UPF1-208ENST00000600012 ORC2Q13416 577 aaPredicted RBP14.21□□□□□ -0.13
UPF1-208ENST00000600012 LPIN1Q14693 890 aa14.21□□□□□ -0.13
UPF1-208ENST00000600012 KLHL40Q2TBA0 621 aa14.21□□□□□ -0.13
UPF1-208ENST00000600012 SKOR2Q2VWA4 1001 aaPredicted RBP14.21□□□□□ -0.13
UPF1-208ENST00000600012 FBXO47Q5MNV8 452 aa14.21□□□□□ -0.13
UPF1-208ENST00000600012 FSIP1Q8NA03 581 aa14.21□□□□□ -0.13
UPF1-208ENST00000600012 RC3H2Q9HBD1 1191 aaKnown RBP14.21□□□□□ -0.13
UPF1-208ENST00000600012 DDX25Q9UHL0 483 aaKnown RBP14.21□□□□□ -0.13
UPF1-208ENST00000600012 SRPRBQ9Y5M8 271 aaKnown RBP14.21□□□□□ -0.13
UPF1-208ENST00000600012 MORC2Q9Y6X9 1032 aaPredicted RBP14.21□□□□□ -0.13
UPF1-208ENST00000600012 MUC6Q6W4X9 2439 aa14.21□□□□□ -0.14
UPF1-208ENST00000600012 A0A1W2PQ27 194 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 A0A1W2PQ64 194 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 A0A1W2PQD8 194 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 VWA3AA6NCI4 1184 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 RRN3P2A6NIE6 340 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 OR52Z1P0C646 297 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 LINC00271P0C7V0 271 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 ALADP13716 330 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 GCFC2P16383 781 aaKnown RBP14.2□□□□□ -0.14
UPF1-208ENST00000600012 BMPR1AP36894 532 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 USP11P51784 963 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 MRPS6P82932 125 aaKnown RBP14.2□□□□□ -0.14
UPF1-208ENST00000600012 IL17AQ16552 155 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 SPECC1Q5M775 1068 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 ADALQ6DHV7 355 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 PPP4R3AQ6IN85 833 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 SHC4Q6S5L8 630 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 TSHZ1Q6ZSZ6 1077 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 EP400NLQ6ZTU2 488 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 DNAJB3Q8WWF6 145 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 MRPS27Q92552 414 aaKnown RBP14.2□□□□□ -0.14
UPF1-208ENST00000600012 CLP1Q92989 425 aaKnown RBP14.2□□□□□ -0.14
UPF1-208ENST00000600012 NAP1L4Q99733 375 aaKnown RBP14.2□□□□□ -0.14
UPF1-208ENST00000600012 CSRNP2Q9H175 543 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 JADE2Q9NQC1 790 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 PKD2L1Q9P0L9 805 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 PRKAG3Q9UGI9 489 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 CDY2AQ9Y6F7 541 aa14.2□□□□□ -0.14
UPF1-208ENST00000600012 A0A1B0GVL5 298 aa14.19□□□□□ -0.14
UPF1-208ENST00000600012 PRR33A8MZF0 331 aa14.19□□□□□ -0.14
UPF1-208ENST00000600012 ENPP3O14638 875 aa14.19□□□□□ -0.14
UPF1-208ENST00000600012 CYP3A4P08684 503 aa14.19□□□□□ -0.14
UPF1-208ENST00000600012 HOXD11P31277 338 aaPredicted RBP14.19□□□□□ -0.14
UPF1-208ENST00000600012 ZNF76P36508 570 aa14.19□□□□□ -0.14
UPF1-208ENST00000600012 CALCRLQ16602 461 aa14.19□□□□□ -0.14
UPF1-208ENST00000600012 MARCH8Q5T0T0 291 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms