RNA–Protein interactions for RNA: ENST00000599389.1

CEACAM1-213, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene CEACAM1, Length 1,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-213ENST00000599389 EPCAMP16422 314 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 PBX3P40426 434 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 FAM189BP81408 668 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 DMWDQ09019 674 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 ALX1Q15699 326 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 SPOUT1Q5T280 376 aaKnown RBP8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 IER5Q5VY09 327 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 TMC7Q7Z402 723 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 SLC39A11Q8N1S5 342 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 SAMD3Q8N6K7 520 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 NETO1Q8TDF5 533 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 ZBTB10Q96DT7 871 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 MTMR8Q96EF0 704 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 ZFP91Q96JP5 570 aaPredicted RBP8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 SENP7Q9BQF6 1050 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 JMJD4Q9H9V9 463 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 ARHGEF3Q9NR81 526 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 RGS18Q9NS28 235 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 C1orf112Q9NSG2 853 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 TMEM161AQ9NX61 479 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 ANGPTL2Q9UKU9 493 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 SIT1Q9Y3P8 196 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 PCDHB7Q9Y5E2 793 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 CFAP46Q8IYW2 2715 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 TENM4Q6N022 2769 aa8.17□□□□□ -1.1
CEACAM1-213ENST00000599389 DOCK6Q96HP0 2047 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 FIBPO43427 364 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 STAM2O75886 525 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 PROS1P07225 676 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 FGFR1P11362 822 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 HOXA13P31271 388 aaPredicted RBP8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 COL9A3Q14050 684 aaPredicted RBP8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 TMEM266Q2M3C6 531 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 GNPTABQ3T906 1256 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 ASPRV1Q53RT3 343 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 SPECC1Q5M775 1068 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 UTP14CQ5TAP6 766 aaKnown RBP8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 VPS53Q5VIR6 699 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 TSHZ3Q63HK5 1081 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 TMC5Q6UXY8 1006 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 SLC24A5Q71RS6 500 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 LRRC43Q8N309 656 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 GPR152Q8TDT2 470 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 RSAD2Q8WXG1 361 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 ZNF558Q96NG5 402 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 CASD1Q96PB1 797 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 DDX23Q9BUQ8 820 aaKnown RBP8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 CELF4Q9BZC1 486 aaKnown RBP8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 FOXQ1Q9C009 403 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 TMEM117Q9H0C3 514 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 FAM49AQ9H0Q0 323 aaPredicted RBP8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 ZBP1Q9H171 429 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 ELAC1Q9H777 363 aaKnown RBP8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 SFXN1Q9H9B4 322 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 SPG21Q9NZD8 308 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 EPS15L1Q9UBC2 864 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 CA14Q9ULX7 337 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 ZMYM6O95789 1325 aa8.16□□□□□ -1.1
CEACAM1-213ENST00000599389 GREB1Q4ZG55 1949 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 GSTTP1A0A1W2PQM5 241 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 SOBPA7XYQ1 873 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 LRRN2O75325 713 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 PAPLNO95428 1278 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 TCF7P36402 384 aaPredicted RBP8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 STARD6P59095 220 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 KRT17Q04695 432 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 TMEM62Q0P6H9 643 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 DSC3Q14574 896 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 LETM2Q2VYF4 491 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 C15orf39Q6ZRI6 1047 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 SLC44A3Q8N4M1 653 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 PNMA1Q8ND90 353 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 TMEM40Q8WWA1 233 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 SECISBP2LQ93073 1101 aaKnown RBP8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 ADAM2Q99965 735 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 AMNQ9BXJ7 453 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 RHOBTB2Q9BYZ6 727 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 LRRCC1Q9C099 1032 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 BCL11AQ9H165 835 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 SLC2A4RGQ9NR83 387 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 ZBTB40Q9NUA8 1239 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 ZSCAN32Q9NX65 697 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 ERAP1Q9NZ08 941 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 USP18Q9UMW8 372 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 PCDHA2Q9Y5H9 948 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 PCDHA1Q9Y5I3 950 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 SPAG17Q6Q759 2223 aa8.15□□□□□ -1.1
CEACAM1-213ENST00000599389 MTCL1Q9Y4B5 1905 aaKnown RBP8.15□□□□□ -1.11
CEACAM1-213ENST00000599389 SMIM35A0A1B0GVV1 85 aa8.14□□□□□ -1.11
CEACAM1-213ENST00000599389 RRN3P2A6NIE6 340 aa8.14□□□□□ -1.11
CEACAM1-213ENST00000599389 M0QZ92 97 aa8.14□□□□□ -1.11
CEACAM1-213ENST00000599389 STK25O00506 426 aa8.14□□□□□ -1.11
CEACAM1-213ENST00000599389 SMARCA5O60264 1052 aaPredicted RBP8.14□□□□□ -1.11
CEACAM1-213ENST00000599389 TBC1D4O60343 1298 aa8.14□□□□□ -1.11
CEACAM1-213ENST00000599389 LRP3O75074 770 aa8.14□□□□□ -1.11
CEACAM1-213ENST00000599389 PCP11498 1178 aaKnown RBP8.14□□□□□ -1.11
CEACAM1-213ENST00000599389 INSRRP14616 1297 aa8.14□□□□□ -1.11
CEACAM1-213ENST00000599389 KCNA2P16389 499 aa8.14□□□□□ -1.11
CEACAM1-213ENST00000599389 MARK3P27448 753 aa8.14□□□□□ -1.11
CEACAM1-213ENST00000599389 WTAPQ15007 396 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms